RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 DOCK1Q14185 1865 aa18.59■□□□□ 0.57
CHD3-205ENST00000449744 MYO5AQ9Y4I1 1855 aaKnown RBP18.59■□□□□ 0.57
CHD3-205ENST00000449744 DYNLL1P63167 89 aaKnown RBP18.59■□□□□ 0.57
CHD3-205ENST00000449744 TTF1Q15361 905 aaPredicted RBP18.59■□□□□ 0.57
CHD3-205ENST00000449744 TMED8Q6PL24 325 aaPredicted RBP18.59■□□□□ 0.57
CHD3-205ENST00000449744 GADL1Q6ZQY3 521 aa18.59■□□□□ 0.57
CHD3-205ENST00000449744 CERS3Q8IU89 383 aa18.59■□□□□ 0.57
CHD3-205ENST00000449744 PARK7Q99497 189 aaKnown RBP18.59■□□□□ 0.57
CHD3-205ENST00000449744 FLT1P17948 1338 aa18.58■□□□□ 0.57
CHD3-205ENST00000449744 A0A0G2JLL6 359 aaPredicted RBP18.58■□□□□ 0.56
CHD3-205ENST00000449744 TRIM75PA6NK02 468 aa18.58■□□□□ 0.56
CHD3-205ENST00000449744 MOGSQ13724 837 aa18.58■□□□□ 0.56
CHD3-205ENST00000449744 PRRT2Q7Z6L0 340 aaPredicted RBP18.58■□□□□ 0.56
CHD3-205ENST00000449744 CRACR2BQ8N4Y2 399 aaPredicted RBP18.58■□□□□ 0.56
CHD3-205ENST00000449744 MIGA1Q8NAN2 632 aa18.58■□□□□ 0.56
CHD3-205ENST00000449744 CPA4Q9UI42 421 aa18.58■□□□□ 0.56
CHD3-205ENST00000449744 HLA-DOAP06340 250 aa18.57■□□□□ 0.56
CHD3-205ENST00000449744 USP5P45974 858 aa18.57■□□□□ 0.56
CHD3-205ENST00000449744 LACTBP83111 547 aaPredicted RBP18.57■□□□□ 0.56
CHD3-205ENST00000449744 GPAT2Q6NUI2 795 aa18.57■□□□□ 0.56
CHD3-205ENST00000449744 C17orf99Q6UX52 265 aa18.57■□□□□ 0.56
CHD3-205ENST00000449744 CCDC84Q86UT8 332 aaPredicted RBP18.57■□□□□ 0.56
CHD3-205ENST00000449744 FOXP4Q8IVH2 680 aaPredicted RBP18.57■□□□□ 0.56
CHD3-205ENST00000449744 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.57■□□□□ 0.56
CHD3-205ENST00000449744 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.57■□□□□ 0.56
CHD3-205ENST00000449744 PDE4DIPQ5VU43 2346 aa18.57■□□□□ 0.56
CHD3-205ENST00000449744 CAP2P40123 477 aa18.56■□□□□ 0.56
CHD3-205ENST00000449744 CAP1Q01518 475 aa18.56■□□□□ 0.56
CHD3-205ENST00000449744 DNAJC2Q99543 621 aaKnown RBP18.56■□□□□ 0.56
CHD3-205ENST00000449744 TBC1D2Q9BYX2 928 aa18.56■□□□□ 0.56
CHD3-205ENST00000449744 SAP30BPQ9UHR5 308 aaKnown RBP18.56■□□□□ 0.56
CHD3-205ENST00000449744 PALD1Q9ULE6 856 aa18.56■□□□□ 0.56
CHD3-205ENST00000449744 ECM2O94769 699 aaPredicted RBP18.55■□□□□ 0.56
CHD3-205ENST00000449744 CYP2C8P10632 490 aa18.55■□□□□ 0.56
CHD3-205ENST00000449744 AS3MTQ9HBK9 375 aa18.55■□□□□ 0.56
CHD3-205ENST00000449744 USP17L5A8MUK1 530 aa18.54■□□□□ 0.56
CHD3-205ENST00000449744 GOLIM4O00461 696 aa18.54■□□□□ 0.56
CHD3-205ENST00000449744 GNRH1P01148 92 aa18.54■□□□□ 0.56
CHD3-205ENST00000449744 SPP2Q13103 211 aa18.54■□□□□ 0.56
CHD3-205ENST00000449744 SLC9C2Q5TAH2 1124 aa18.54■□□□□ 0.56
CHD3-205ENST00000449744 ZNF280CQ8ND82 737 aa18.54■□□□□ 0.56
CHD3-205ENST00000449744 LRRCC1Q9C099 1032 aa18.54■□□□□ 0.56
CHD3-205ENST00000449744 ARHGAP39Q9C0H5 1083 aa18.54■□□□□ 0.56
CHD3-205ENST00000449744 SLC45A1Q9Y2W3 748 aa18.54■□□□□ 0.56
CHD3-205ENST00000449744 PTCH2Q9Y6C5 1203 aa18.54■□□□□ 0.56
CHD3-205ENST00000449744 ADGRA2Q96PE1 1338 aa18.53■□□□□ 0.56
CHD3-205ENST00000449744 MAGEB6P1A0A0J9YX57 407 aa18.53■□□□□ 0.56
CHD3-205ENST00000449744 RRP1BQ14684 758 aaKnown RBP18.53■□□□□ 0.56
CHD3-205ENST00000449744 SLC4A8Q2Y0W8 1093 aa18.53■□□□□ 0.56
CHD3-205ENST00000449744 SMCR8Q8TEV9 937 aaPredicted RBP18.53■□□□□ 0.56
CHD3-205ENST00000449744 BOLA2Q9H3K6 86 aa18.53■□□□□ 0.56
CHD3-205ENST00000449744 AGTPBP1Q9UPW5 1226 aa18.53■□□□□ 0.56
CHD3-205ENST00000449744 FOCADQ5VW36 1801 aa18.53■□□□□ 0.56
CHD3-205ENST00000449744 CDK5RAP2Q96SN8 1893 aa18.52■□□□□ 0.56
CHD3-205ENST00000449744 PHIPQ8WWQ0 1821 aa18.52■□□□□ 0.56
CHD3-205ENST00000449744 FMNL1O95466 1100 aaPredicted RBP18.52■□□□□ 0.56
CHD3-205ENST00000449744 ASNSP08243 561 aa18.52■□□□□ 0.56
CHD3-205ENST00000449744 PDE6AP16499 860 aa18.52■□□□□ 0.56
CHD3-205ENST00000449744 HOXD10P28358 340 aa18.52■□□□□ 0.56
CHD3-205ENST00000449744 PSMC4P43686 418 aa18.52■□□□□ 0.56
CHD3-205ENST00000449744 PRMT2P55345 433 aa18.52■□□□□ 0.56
CHD3-205ENST00000449744 SLC9C1Q4G0N8 1177 aa18.52■□□□□ 0.56
CHD3-205ENST00000449744 NBPF11Q86T75 865 aa18.52■□□□□ 0.56
CHD3-205ENST00000449744 ARMC5Q96C12 935 aa18.52■□□□□ 0.56
CHD3-205ENST00000449744 PNMA3Q9UL41 463 aa18.52■□□□□ 0.56
CHD3-205ENST00000449744 ATAD5Q96QE3 1844 aa18.51■□□□□ 0.55
CHD3-205ENST00000449744 ATP5JP18859 108 aa18.51■□□□□ 0.55
CHD3-205ENST00000449744 PABPC4Q13310 644 aaKnown RBP eCLIP18.51■□□□□ 0.556e-10■■□□□ 11.4
CHD3-205ENST00000449744 TTC6Q86TZ1 520 aa18.51■□□□□ 0.55
CHD3-205ENST00000449744 METTL16Q86W50 562 aaKnown RBP18.51■□□□□ 0.55
CHD3-205ENST00000449744 PROCA1Q8NCQ7 364 aaPredicted RBP18.51■□□□□ 0.55
CHD3-205ENST00000449744 GINM1Q9NU53 330 aa18.51■□□□□ 0.55
CHD3-205ENST00000449744 PAG1Q9NWQ8 432 aa18.51■□□□□ 0.55
CHD3-205ENST00000449744 ZNF532Q9HCE3 1301 aa18.5■□□□□ 0.55
CHD3-205ENST00000449744 GDF11O95390 407 aa18.5■□□□□ 0.55
CHD3-205ENST00000449744 BCRP11274 1271 aa18.5■□□□□ 0.55
CHD3-205ENST00000449744 HMGCS2P54868 508 aa18.5■□□□□ 0.55
CHD3-205ENST00000449744 FCGRTP55899 365 aa18.5■□□□□ 0.55
CHD3-205ENST00000449744 EDC3Q96F86 508 aaKnown RBP18.5■□□□□ 0.55
CHD3-205ENST00000449744 RIOK1Q9BRS2 568 aaKnown RBP18.5■□□□□ 0.55
CHD3-205ENST00000449744 CRNKL1Q9BZJ0 848 aaKnown RBP18.5■□□□□ 0.55
CHD3-205ENST00000449744 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.5■□□□□ 0.552e-6■■■□□ 17.7
CHD3-205ENST00000449744 DNAJC18Q9H819 358 aa18.5■□□□□ 0.55
CHD3-205ENST00000449744 SIPA1L1O43166 1804 aa18.5■□□□□ 0.55
CHD3-205ENST00000449744 PTPRFP10586 1907 aa18.5■□□□□ 0.55
CHD3-205ENST00000449744 SMARCA5O60264 1052 aaPredicted RBP18.49■□□□□ 0.55
CHD3-205ENST00000449744 TREML2Q5T2D2 321 aa18.49■□□□□ 0.55
CHD3-205ENST00000449744 TRIM47Q96LD4 638 aa18.49■□□□□ 0.55
CHD3-205ENST00000449744 WDR18Q9BV38 432 aa18.49■□□□□ 0.55
CHD3-205ENST00000449744 TMEM106CQ9BVX2 250 aa18.49■□□□□ 0.55
CHD3-205ENST00000449744 TMOD4Q9NZQ9 345 aa18.49■□□□□ 0.55
CHD3-205ENST00000449744 SRRDQ9UH36 339 aa18.49■□□□□ 0.55
CHD3-205ENST00000449744 SERPINB13Q9UIV8 391 aa18.49■□□□□ 0.55
CHD3-205ENST00000449744 MYH1P12882 1939 aa18.49■□□□□ 0.55
CHD3-205ENST00000449744 ZSWIM8A7E2V4 1837 aa18.49■□□□□ 0.55
CHD3-205ENST00000449744 POLR3DP05423 398 aaPredicted RBP18.48■□□□□ 0.55
CHD3-205ENST00000449744 OSBPP22059 807 aa18.48■□□□□ 0.55
CHD3-205ENST00000449744 CTGFP29279 349 aa18.48■□□□□ 0.55
CHD3-205ENST00000449744 SH3D19Q5HYK7 790 aa18.48■□□□□ 0.55
CHD3-205ENST00000449744 RAET1EQ8TD07 263 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms