RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 TXKP42681 527 aa11.71□□□□□ -0.54
CTC1-202ENST00000449476 CCDC65Q8IXS2 484 aa11.71□□□□□ -0.54
CTC1-202ENST00000449476 TRMT44Q8IYL2 757 aaKnown RBP11.71□□□□□ -0.54
CTC1-202ENST00000449476 LMBR1Q8WVP7 490 aa11.71□□□□□ -0.54
CTC1-202ENST00000449476 FERMT2Q96AC1 680 aa11.71□□□□□ -0.54
CTC1-202ENST00000449476 CYP21A2P08686 494 aa11.7□□□□□ -0.54
CTC1-202ENST00000449476 CAPN2P17655 700 aa11.7□□□□□ -0.54
CTC1-202ENST00000449476 EIF6P56537 245 aaKnown RBP11.7□□□□□ -0.54
CTC1-202ENST00000449476 TRIM14Q14142 442 aa11.7□□□□□ -0.54
CTC1-202ENST00000449476 IFNL3Q8IZI9 196 aa11.7□□□□□ -0.54
CTC1-202ENST00000449476 EYA3Q99504 573 aa11.7□□□□□ -0.54
CTC1-202ENST00000449476 VEZTQ9HBM0 779 aa11.7□□□□□ -0.54
CTC1-202ENST00000449476 KRT9P35527 623 aa11.7□□□□□ -0.54
CTC1-202ENST00000449476 PNOCQ13519 176 aa11.7□□□□□ -0.54
CTC1-202ENST00000449476 CCDC91Q7Z6B0 441 aa11.7□□□□□ -0.54
CTC1-202ENST00000449476 ZNF500O60304 480 aaPredicted RBP11.7□□□□□ -0.54
CTC1-202ENST00000449476 OPA1O60313 960 aa11.7□□□□□ -0.54
CTC1-202ENST00000449476 CCNT1O60563 726 aaKnown RBP11.7□□□□□ -0.54
CTC1-202ENST00000449476 PDIA3P30101 505 aaKnown RBP11.7□□□□□ -0.54
CTC1-202ENST00000449476 PPARAQ07869 468 aa11.7□□□□□ -0.54
CTC1-202ENST00000449476 PUS3Q9BZE2 481 aaKnown RBP11.7□□□□□ -0.54
CTC1-202ENST00000449476 SERTAD1Q9UHV2 236 aa11.7□□□□□ -0.54
CTC1-202ENST00000449476 TTF2Q9UNY4 1162 aaKnown RBP11.7□□□□□ -0.54
CTC1-202ENST00000449476 ADCY9O60503 1353 aa11.7□□□□□ -0.54
CTC1-202ENST00000449476 USP17L12C9JPN9 530 aa11.7□□□□□ -0.54
CTC1-202ENST00000449476 USP17L21D6R901 530 aa11.7□□□□□ -0.54
CTC1-202ENST00000449476 PRPHP41219 470 aa11.7□□□□□ -0.54
CTC1-202ENST00000449476 TFAP4Q01664 338 aa11.7□□□□□ -0.54
CTC1-202ENST00000449476 SCRN1Q12765 414 aa11.7□□□□□ -0.54
CTC1-202ENST00000449476 CNNM4Q6P4Q7 775 aa11.7□□□□□ -0.54
CTC1-202ENST00000449476 PTCH1Q13635 1447 aa11.69□□□□□ -0.54
CTC1-202ENST00000449476 MTX1Q13505 466 aa11.69□□□□□ -0.54
CTC1-202ENST00000449476 NONOQ15233 471 aaKnown RBP eCLIP11.69□□□□□ -0.54
CTC1-202ENST00000449476 ZNF589Q86UQ0 364 aaPredicted RBP11.69□□□□□ -0.54
CTC1-202ENST00000449476 NOSTRINQ8IVI9 506 aa11.69□□□□□ -0.54
CTC1-202ENST00000449476 DNAI2Q9GZS0 605 aa11.69□□□□□ -0.54
CTC1-202ENST00000449476 PCDHA7Q9UN72 937 aa11.69□□□□□ -0.54
CTC1-202ENST00000449476 MRVI1Q9Y6F6 885 aa11.69□□□□□ -0.54
CTC1-202ENST00000449476 VAV2P52735 878 aa11.69□□□□□ -0.54
CTC1-202ENST00000449476 LRMPQ12912 555 aa11.69□□□□□ -0.54
CTC1-202ENST00000449476 CMTR1Q8N1G2 835 aaKnown RBP11.69□□□□□ -0.54
CTC1-202ENST00000449476 FBXO18Q8NFZ0 1043 aa11.69□□□□□ -0.54
CTC1-202ENST00000449476 RBM17Q96I25 401 aaKnown RBP11.69□□□□□ -0.54
CTC1-202ENST00000449476 TAB2Q9NYJ8 693 aa11.69□□□□□ -0.54
CTC1-202ENST00000449476 VPS18Q9P253 973 aa11.69□□□□□ -0.54
CTC1-202ENST00000449476 RSPH14Q9UHP6 348 aa11.69□□□□□ -0.54
CTC1-202ENST00000449476 RPL13P26373 211 aaKnown RBP11.69□□□□□ -0.54
CTC1-202ENST00000449476 RPS8P62241 208 aaKnown RBP11.69□□□□□ -0.54
CTC1-202ENST00000449476 ELF2Q15723 593 aa11.69□□□□□ -0.54
CTC1-202ENST00000449476 FAM47AQ5JRC9 791 aa11.69□□□□□ -0.54
CTC1-202ENST00000449476 CYP26C1Q6V0L0 522 aa11.69□□□□□ -0.54
CTC1-202ENST00000449476 CCDC155Q8N6L0 562 aa11.69□□□□□ -0.54
CTC1-202ENST00000449476 NAP1L4Q99733 375 aaKnown RBP11.69□□□□□ -0.54
CTC1-202ENST00000449476 NAPGQ99747 312 aaPredicted RBP11.69□□□□□ -0.54
CTC1-202ENST00000449476 GGA1Q9UJY5 639 aa11.69□□□□□ -0.54
CTC1-202ENST00000449476 SHROOM2Q13796 1616 aa11.69□□□□□ -0.54
CTC1-202ENST00000449476 ARID4AP29374 1257 aaPredicted RBP11.68□□□□□ -0.54
CTC1-202ENST00000449476 DCAF17Q5H9S7 520 aaPredicted RBP11.68□□□□□ -0.54
CTC1-202ENST00000449476 BBXQ8WY36 941 aaPredicted RBP11.68□□□□□ -0.54
CTC1-202ENST00000449476 TRPM1Q7Z4N2 1603 aa11.68□□□□□ -0.54
CTC1-202ENST00000449476 NLRP1Q9C000 1473 aa11.68□□□□□ -0.54
CTC1-202ENST00000449476 CMA1P23946 247 aa11.68□□□□□ -0.54
CTC1-202ENST00000449476 UBE4AQ14139 1066 aa11.68□□□□□ -0.54
CTC1-202ENST00000449476 ZMYM1Q5SVZ6 1142 aa11.68□□□□□ -0.54
CTC1-202ENST00000449476 TMTC1Q8IUR5 882 aa11.68□□□□□ -0.54
CTC1-202ENST00000449476 FANCBQ8NB91 859 aa11.68□□□□□ -0.54
CTC1-202ENST00000449476 LRWD1Q9UFC0 647 aa11.68□□□□□ -0.54
CTC1-202ENST00000449476 CDC42BPAQ5VT25 1732 aa11.68□□□□□ -0.54
CTC1-202ENST00000449476 IVLP07476 585 aa11.68□□□□□ -0.54
CTC1-202ENST00000449476 ADORA1P30542 326 aa11.68□□□□□ -0.54
CTC1-202ENST00000449476 RAPGEF1Q13905 1077 aa11.68□□□□□ -0.54
CTC1-202ENST00000449476 KRT25Q7Z3Z0 450 aa11.68□□□□□ -0.54
CTC1-202ENST00000449476 MAPKAPK5Q8IW41 473 aa11.68□□□□□ -0.54
CTC1-202ENST00000449476 ATRIPQ8WXE1 791 aa11.68□□□□□ -0.54
CTC1-202ENST00000449476 PARP3Q9Y6F1 533 aa11.68□□□□□ -0.54
CTC1-202ENST00000449476 TET3O43151 1660 aa11.68□□□□□ -0.54
CTC1-202ENST00000449476 BTBD18B2RXH4 712 aa11.68□□□□□ -0.54
CTC1-202ENST00000449476 SPECC1LQ69YQ0 1117 aa11.68□□□□□ -0.54
CTC1-202ENST00000449476 IFT81Q8WYA0 676 aa11.68□□□□□ -0.54
CTC1-202ENST00000449476 GREM2Q9H772 168 aa11.68□□□□□ -0.54
CTC1-202ENST00000449476 GPR108Q9NPR9 543 aa11.68□□□□□ -0.54
CTC1-202ENST00000449476 IQGAP3Q86VI3 1631 aa11.68□□□□□ -0.54
CTC1-202ENST00000449476 PDE8BO95263 885 aa11.67□□□□□ -0.54
CTC1-202ENST00000449476 BCAMP50895 628 aa11.67□□□□□ -0.54
CTC1-202ENST00000449476 SDR42E1Q8WUS8 393 aa11.67□□□□□ -0.54
CTC1-202ENST00000449476 ZMYM6O95789 1325 aa11.67□□□□□ -0.54
CTC1-202ENST00000449476 WDHD1O75717 1129 aaPredicted RBP11.67□□□□□ -0.54
CTC1-202ENST00000449476 GYG1P46976 350 aa11.67□□□□□ -0.54
CTC1-202ENST00000449476 HDXQ7Z353 690 aa11.67□□□□□ -0.54
CTC1-202ENST00000449476 ZCCHC11Q5TAX3 1644 aaKnown RBP11.67□□□□□ -0.54
CTC1-202ENST00000449476 PHKA1P46020 1223 aa11.67□□□□□ -0.54
CTC1-202ENST00000449476 PLS1Q14651 629 aa11.67□□□□□ -0.54
CTC1-202ENST00000449476 FCHSD1Q86WN1 690 aa11.67□□□□□ -0.54
CTC1-202ENST00000449476 RGS22Q8NE09 1264 aa11.67□□□□□ -0.54
CTC1-202ENST00000449476 TCHPQ9BT92 498 aa11.67□□□□□ -0.54
CTC1-202ENST00000449476 TSGA10Q9BZW7 698 aa11.67□□□□□ -0.54
CTC1-202ENST00000449476 BLZF1Q9H2G9 400 aa11.67□□□□□ -0.54
CTC1-202ENST00000449476 TNKSO95271 1327 aa11.67□□□□□ -0.54
CTC1-202ENST00000449476 ADCY10Q96PN6 1610 aa11.67□□□□□ -0.54
CTC1-202ENST00000449476 CERS3Q8IU89 383 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms