RNA–Protein interactions for RNA: ENST00000449389.1

SRRT-205, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-205ENST00000449389 TRIM47Q96LD4 638 aa13.21□□□□□ -0.29
SRRT-205ENST00000449389 TBC1D2Q9BYX2 928 aa13.21□□□□□ -0.29
SRRT-205ENST00000449389 PIH1D3Q9NQM4 214 aaKnown RBP13.21□□□□□ -0.29
SRRT-205ENST00000449389 PI4KBQ9UBF8 816 aa13.21□□□□□ -0.29
SRRT-205ENST00000449389 SRRDQ9UH36 339 aa13.21□□□□□ -0.29
SRRT-205ENST00000449389 EXOC6BQ9Y2D4 811 aa13.21□□□□□ -0.29
SRRT-205ENST00000449389 CENPFP49454 3210 aa13.2□□□□□ -0.3
SRRT-205ENST00000449389 RBBP6Q7Z6E9 1792 aaKnown RBP13.2□□□□□ -0.3
SRRT-205ENST00000449389 FMNL1O95466 1100 aaPredicted RBP13.2□□□□□ -0.3
SRRT-205ENST00000449389 CAP2P40123 477 aa13.2□□□□□ -0.3
SRRT-205ENST00000449389 TMED8Q6PL24 325 aaPredicted RBP13.2□□□□□ -0.3
SRRT-205ENST00000449389 ADGRA1Q86SQ6 560 aa13.2□□□□□ -0.3
SRRT-205ENST00000449389 AACSQ86V21 672 aa13.2□□□□□ -0.3
SRRT-205ENST00000449389 CERS3Q8IU89 383 aa13.2□□□□□ -0.3
SRRT-205ENST00000449389 MAPKAPK5Q8IW41 473 aa13.2□□□□□ -0.3
SRRT-205ENST00000449389 TGFBRAP1Q8WUH2 860 aa13.2□□□□□ -0.3
SRRT-205ENST00000449389 DDX19BQ9UMR2 479 aa13.2□□□□□ -0.3
SRRT-205ENST00000449389 FLT1P17948 1338 aa13.19□□□□□ -0.3
SRRT-205ENST00000449389 HMMRO75330 724 aa13.19□□□□□ -0.3
SRRT-205ENST00000449389 IDH1O75874 414 aaKnown RBP13.19□□□□□ -0.3
SRRT-205ENST00000449389 OSBPP22059 807 aa13.19□□□□□ -0.3
SRRT-205ENST00000449389 CYP7A1P22680 504 aa13.19□□□□□ -0.3
SRRT-205ENST00000449389 CTGFP29279 349 aa13.19□□□□□ -0.3
SRRT-205ENST00000449389 FCGRTP55899 365 aa13.19□□□□□ -0.3
SRRT-205ENST00000449389 CCDC84Q86UT8 332 aaPredicted RBP13.19□□□□□ -0.3
SRRT-205ENST00000449389 RPAP2Q8IXW5 612 aaPredicted RBP13.19□□□□□ -0.3
SRRT-205ENST00000449389 PROCA1Q8NCQ7 364 aaPredicted RBP13.19□□□□□ -0.3
SRRT-205ENST00000449389 ZNF280CQ8ND82 737 aa13.19□□□□□ -0.3
SRRT-205ENST00000449389 SMCR8Q8TEV9 937 aaPredicted RBP13.19□□□□□ -0.3
SRRT-205ENST00000449389 SH3TC2Q8TF17 1288 aa13.19□□□□□ -0.3
SRRT-205ENST00000449389 CHMP4BQ9H444 224 aaKnown RBP13.19□□□□□ -0.3
SRRT-205ENST00000449389 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.19□□□□□ -0.3
SRRT-205ENST00000449389 AGTPBP1Q9UPW5 1226 aa13.19□□□□□ -0.3
SRRT-205ENST00000449389 ZSWIM8A7E2V4 1837 aa13.18□□□□□ -0.3
SRRT-205ENST00000449389 MYPNQ86TC9 1320 aa13.18□□□□□ -0.3
SRRT-205ENST00000449389 USP17L5A8MUK1 530 aa13.18□□□□□ -0.3
SRRT-205ENST00000449389 ECM2O94769 699 aaPredicted RBP13.18□□□□□ -0.3
SRRT-205ENST00000449389 EN2P19622 333 aaPredicted RBP13.18□□□□□ -0.3
SRRT-205ENST00000449389 MAP3K12Q12852 859 aa13.18□□□□□ -0.3
SRRT-205ENST00000449389 SPP2Q13103 211 aa13.18□□□□□ -0.3
SRRT-205ENST00000449389 SLC4A8Q2Y0W8 1093 aa13.18□□□□□ -0.3
SRRT-205ENST00000449389 FOXP4Q8IVH2 680 aaPredicted RBP13.18□□□□□ -0.3
SRRT-205ENST00000449389 RHPN1Q8TCX5 695 aa13.18□□□□□ -0.3
SRRT-205ENST00000449389 RAET1EQ8TD07 263 aa13.18□□□□□ -0.3
SRRT-205ENST00000449389 TRIM34Q9BYJ4 488 aa13.18□□□□□ -0.3
SRRT-205ENST00000449389 AS3MTQ9HBK9 375 aa13.18□□□□□ -0.3
SRRT-205ENST00000449389 PNMA3Q9UL41 463 aa13.18□□□□□ -0.3
SRRT-205ENST00000449389 PHIPQ8WWQ0 1821 aa13.18□□□□□ -0.3
SRRT-205ENST00000449389 HLA-DOAP06340 250 aa13.17□□□□□ -0.3
SRRT-205ENST00000449389 ASNSP08243 561 aa13.17□□□□□ -0.3
SRRT-205ENST00000449389 DYNLL1P63167 89 aaKnown RBP13.17□□□□□ -0.3
SRRT-205ENST00000449389 PABPC4Q13310 644 aaKnown RBP eCLIP13.17□□□□□ -0.3
SRRT-205ENST00000449389 RRP1BQ14684 758 aaKnown RBP13.17□□□□□ -0.3
SRRT-205ENST00000449389 METTL16Q86W50 562 aaKnown RBP13.17□□□□□ -0.3
SRRT-205ENST00000449389 CLASRPQ8N2M8 674 aaKnown RBP13.17□□□□□ -0.3
SRRT-205ENST00000449389 CRACR2BQ8N4Y2 399 aaPredicted RBP13.17□□□□□ -0.3
SRRT-205ENST00000449389 MAGEB6Q8N7X4 407 aa13.17□□□□□ -0.3
SRRT-205ENST00000449389 KIF1BPQ96EK5 621 aa13.17□□□□□ -0.3
SRRT-205ENST00000449389 IL1RAPL2Q9NP60 686 aa13.17□□□□□ -0.3
SRRT-205ENST00000449389 GINM1Q9NU53 330 aa13.17□□□□□ -0.3
SRRT-205ENST00000449389 ZBTB40Q9NUA8 1239 aa13.17□□□□□ -0.3
SRRT-205ENST00000449389 RCAN3Q9UKA8 241 aa13.17□□□□□ -0.3
SRRT-205ENST00000449389 COG6Q9Y2V7 657 aa13.17□□□□□ -0.3
SRRT-205ENST00000449389 PTPRFP10586 1907 aa13.17□□□□□ -0.3
SRRT-205ENST00000449389 GRK4P32298 578 aa13.16□□□□□ -0.3
SRRT-205ENST00000449389 HMGCS2P54868 508 aa13.16□□□□□ -0.3
SRRT-205ENST00000449389 TTF1Q15361 905 aaPredicted RBP13.16□□□□□ -0.3
SRRT-205ENST00000449389 SH3D19Q5HYK7 790 aa13.16□□□□□ -0.3
SRRT-205ENST00000449389 TREML2Q5T2D2 321 aa13.16□□□□□ -0.3
SRRT-205ENST00000449389 MIGA1Q8NAN2 632 aa13.16□□□□□ -0.3
SRRT-205ENST00000449389 WDR18Q9BV38 432 aa13.16□□□□□ -0.3
SRRT-205ENST00000449389 DNAJC18Q9H819 358 aa13.16□□□□□ -0.3
SRRT-205ENST00000449389 PALD1Q9ULE6 856 aa13.16□□□□□ -0.3
SRRT-205ENST00000449389 NDUFB9Q9Y6M9 179 aa13.16□□□□□ -0.3
SRRT-205ENST00000449389 SLC34A2O95436 690 aa13.15□□□□□ -0.3
SRRT-205ENST00000449389 MYCP01106 439 aaPredicted RBP13.15□□□□□ -0.3
SRRT-205ENST00000449389 USP5P45974 858 aa13.15□□□□□ -0.3
SRRT-205ENST00000449389 GCLCP48506 637 aaPredicted RBP13.15□□□□□ -0.3
SRRT-205ENST00000449389 PRKCZQ05513 592 aa13.15□□□□□ -0.3
SRRT-205ENST00000449389 FAM110CQ1W6H9 321 aa13.15□□□□□ -0.3
SRRT-205ENST00000449389 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.15□□□□□ -0.3
SRRT-205ENST00000449389 ANTXR1Q9H6X2 564 aa13.15□□□□□ -0.3
SRRT-205ENST00000449389 SAP30BPQ9UHR5 308 aaKnown RBP13.15□□□□□ -0.3
SRRT-205ENST00000449389 SIPA1L1O43166 1804 aa13.15□□□□□ -0.3
SRRT-205ENST00000449389 MKI67P46013 3256 aaKnown RBP13.14□□□□□ -0.31
SRRT-205ENST00000449389 FOCADQ5VW36 1801 aa13.14□□□□□ -0.31
SRRT-205ENST00000449389 APBB1O00213 710 aa13.14□□□□□ -0.31
SRRT-205ENST00000449389 TNPO2O14787 897 aaKnown RBP13.14□□□□□ -0.31
SRRT-205ENST00000449389 RAB11FIP3O75154 756 aa13.14□□□□□ -0.31
SRRT-205ENST00000449389 IFIT2P09913 472 aaKnown RBP13.14□□□□□ -0.31
SRRT-205ENST00000449389 UBXN2AP68543 259 aa13.14□□□□□ -0.31
SRRT-205ENST00000449389 SIRT2Q8IXJ6 389 aa13.14□□□□□ -0.31
SRRT-205ENST00000449389 SLAIN1Q8ND83 568 aa13.14□□□□□ -0.31
SRRT-205ENST00000449389 BIN2Q9UBW5 565 aaPredicted RBP13.14□□□□□ -0.31
SRRT-205ENST00000449389 ZBTB21Q9ULJ3 1066 aa13.14□□□□□ -0.31
SRRT-205ENST00000449389 LOC285556D6RIA3 1793 aa13.14□□□□□ -0.31
SRRT-205ENST00000449389 MYO5AQ9Y4I1 1855 aaKnown RBP13.14□□□□□ -0.31
SRRT-205ENST00000449389 ATAD5Q96QE3 1844 aa13.13□□□□□ -0.31
SRRT-205ENST00000449389 BRCA2P51587 3418 aa13.13□□□□□ -0.31
SRRT-205ENST00000449389 CDK5RAP2Q96SN8 1893 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms