RNA–Protein interactions for RNA: ENST00000449228.5

BBC3-204, Transcript of BCL2 binding component 3, humanhuman

TSL 1 (best) BASIC

Gene BBC3, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBC3-204ENST00000449228 VPS33BQ9H267 617 aa29.21■■■□□ 2.27
BBC3-204ENST00000449228 CPLX2Q6PUV4 134 aaKnown RBP29.2■■■□□ 2.27
BBC3-204ENST00000449228 MRIQ9BWK5 157 aa29.2■■■□□ 2.27
BBC3-204ENST00000449228 KCNQ5Q9NR82 932 aa29.2■■■□□ 2.27
BBC3-204ENST00000449228 PRDM1O75626 825 aa29.2■■■□□ 2.26
BBC3-204ENST00000449228 SKOR2Q2VWA4 1001 aaPredicted RBP29.2■■■□□ 2.26
BBC3-204ENST00000449228 ZSCAN10Q96SZ4 725 aaPredicted RBP29.2■■■□□ 2.26
BBC3-204ENST00000449228 ZNF287Q9HBT7 754 aa29.2■■■□□ 2.26
BBC3-204ENST00000449228 FLT1P17948 1338 aa29.19■■■□□ 2.26
BBC3-204ENST00000449228 CDKL5O76039 1030 aa29.19■■■□□ 2.26
BBC3-204ENST00000449228 ROBO3Q96MS0 1386 aa29.18■■■□□ 2.26
BBC3-204ENST00000449228 NAV1Q8NEY1 1877 aa29.18■■■□□ 2.26
BBC3-204ENST00000449228 TNKSO95271 1327 aa29.18■■■□□ 2.26
BBC3-204ENST00000449228 H3BQV1 296 aa29.18■■■□□ 2.26
BBC3-204ENST00000449228 TRAK2O60296 914 aa29.18■■■□□ 2.26
BBC3-204ENST00000449228 SCNN1DP51172 638 aa29.18■■■□□ 2.26
BBC3-204ENST00000449228 DALRD3Q5D0E6 543 aaKnown RBP29.18■■■□□ 2.26
BBC3-204ENST00000449228 IFFO2Q5TF58 517 aa29.18■■■□□ 2.26
BBC3-204ENST00000449228 MICU3Q86XE3 530 aa29.18■■■□□ 2.26
BBC3-204ENST00000449228 SENP2Q9HC62 589 aa29.18■■■□□ 2.26
BBC3-204ENST00000449228 HDLBPQ00341 1268 aaKnown RBP29.17■■■□□ 2.26
BBC3-204ENST00000449228 PPP1R1BQ9UD71 204 aaPredicted RBP29.17■■■□□ 2.26
BBC3-204ENST00000449228 GOLGA8AA7E2F4 631 aa29.17■■■□□ 2.26
BBC3-204ENST00000449228 RCAN1P53805 252 aa29.17■■■□□ 2.26
BBC3-204ENST00000449228 RAB11FIP4Q86YS3 637 aa29.17■■■□□ 2.26
BBC3-204ENST00000449228 SAP30BPQ9UHR5 308 aaKnown RBP29.17■■■□□ 2.26
BBC3-204ENST00000449228 CRKP46108 304 aa29.16■■■□□ 2.26
BBC3-204ENST00000449228 SLC4A8Q2Y0W8 1093 aa29.16■■■□□ 2.26
BBC3-204ENST00000449228 KIAA0825Q8IV33 1275 aa29.16■■■□□ 2.26
BBC3-204ENST00000449228 LARGE2Q8N3Y3 721 aa29.16■■■□□ 2.26
BBC3-204ENST00000449228 MKNK2Q9HBH9 465 aa29.16■■■□□ 2.26
BBC3-204ENST00000449228 TSPY2A6NKD2 308 aa29.15■■■□□ 2.26
BBC3-204ENST00000449228 EVX2Q03828 476 aa29.15■■■□□ 2.26
BBC3-204ENST00000449228 SEC23AQ15436 765 aa29.15■■■□□ 2.26
BBC3-204ENST00000449228 USP40Q9NVE5 1235 aa29.15■■■□□ 2.26
BBC3-204ENST00000449228 CD2APQ9Y5K6 639 aa29.15■■■□□ 2.26
BBC3-204ENST00000449228 IFIT1BQ5T764 474 aaKnown RBP29.15■■■□□ 2.26
BBC3-204ENST00000449228 CDC37L1Q7L3B6 337 aa29.15■■■□□ 2.26
BBC3-204ENST00000449228 ZDHHC15Q96MV8 337 aa29.15■■■□□ 2.26
BBC3-204ENST00000449228 FOXD4L6Q3SYB3 417 aaPredicted RBP29.13■■■□□ 2.25
BBC3-204ENST00000449228 FOXD4L3Q6VB84 417 aaPredicted RBP29.13■■■□□ 2.25
BBC3-204ENST00000449228 ENAHQ8N8S7 591 aaPredicted RBP29.13■■■□□ 2.25
BBC3-204ENST00000449228 ZNF277Q9NRM2 450 aaPredicted RBP29.13■■■□□ 2.25
BBC3-204ENST00000449228 NID2Q14112 1375 aa29.13■■■□□ 2.25
BBC3-204ENST00000449228 CCDC196A0A1B0GTZ2 297 aa29.13■■■□□ 2.25
BBC3-204ENST00000449228 RXRAP19793 462 aa29.13■■■□□ 2.25
BBC3-204ENST00000449228 PLCD1P51178 756 aa29.13■■■□□ 2.25
BBC3-204ENST00000449228 ZNF654Q8IZM8 581 aa29.13■■■□□ 2.25
BBC3-204ENST00000449228 ZNF444Q8N0Y2 327 aaPredicted RBP29.13■■■□□ 2.25
BBC3-204ENST00000449228 DYNLL2Q96FJ2 89 aa29.13■■■□□ 2.25
BBC3-204ENST00000449228 SGIP1Q9BQI5 828 aa29.13■■■□□ 2.25
BBC3-204ENST00000449228 MYO3BQ8WXR4 1341 aa29.12■■■□□ 2.25
BBC3-204ENST00000449228 YDJCA8MPS7 323 aa29.12■■■□□ 2.25
BBC3-204ENST00000449228 ADD1P35611 737 aaKnown RBP29.12■■■□□ 2.25
BBC3-204ENST00000449228 PPP2R5BQ15173 497 aa29.12■■■□□ 2.25
BBC3-204ENST00000449228 CCDC178Q5BJE1 867 aa29.12■■■□□ 2.25
BBC3-204ENST00000449228 APOBEC3HQ6NTF7 200 aaKnown RBP29.12■■■□□ 2.25
BBC3-204ENST00000449228 KLHL34Q8N239 644 aa29.12■■■□□ 2.25
BBC3-204ENST00000449228 MYL10Q9BUA6 226 aa29.12■■■□□ 2.25
BBC3-204ENST00000449228 ORC3Q9UBD5 711 aaPredicted RBP29.12■■■□□ 2.25
BBC3-204ENST00000449228 SERPINA10Q9UK55 444 aa29.12■■■□□ 2.25
BBC3-204ENST00000449228 SCN9AQ15858 1988 aa29.12■■■□□ 2.25
BBC3-204ENST00000449228 CDK5RAP2Q96SN8 1893 aa29.12■■■□□ 2.25
BBC3-204ENST00000449228 PRPF40AO75400 957 aaKnown RBP29.11■■■□□ 2.25
BBC3-204ENST00000449228 RBM5P52756 815 aaKnown RBP eCLIP29.11■■■□□ 2.25
BBC3-204ENST00000449228 PICALMQ13492 652 aa29.11■■■□□ 2.25
BBC3-204ENST00000449228 FAM47AQ5JRC9 791 aa29.11■■■□□ 2.25
BBC3-204ENST00000449228 CATIPQ7Z7H3 387 aa29.11■■■□□ 2.25
BBC3-204ENST00000449228 CCDC144CPQ8IYA2 1237 aa29.11■■■□□ 2.25
BBC3-204ENST00000449228 LMBRD1Q9NUN5 540 aa29.11■■■□□ 2.25
BBC3-204ENST00000449228 PSDA5PKW4 1024 aaPredicted RBP29.1■■■□□ 2.25
BBC3-204ENST00000449228 RTN1Q16799 776 aa29.1■■■□□ 2.25
BBC3-204ENST00000449228 CDC42EP5Q6NZY7 148 aa29.1■■■□□ 2.25
BBC3-204ENST00000449228 TTC6Q86TZ1 520 aa29.1■■■□□ 2.25
BBC3-204ENST00000449228 FDPSP14324 419 aaKnown RBP29.1■■■□□ 2.25
BBC3-204ENST00000449228 CDC27P30260 824 aa29.1■■■□□ 2.25
BBC3-204ENST00000449228 TFAP4Q01664 338 aa29.1■■■□□ 2.25
BBC3-204ENST00000449228 C16orf86Q6ZW13 317 aa29.1■■■□□ 2.25
BBC3-204ENST00000449228 ZSCAN16Q9H4T2 348 aaPredicted RBP29.1■■■□□ 2.25
BBC3-204ENST00000449228 WDHD1O75717 1129 aaPredicted RBP29.09■■■□□ 2.25
BBC3-204ENST00000449228 CALM1P0DP23 149 aa29.09■■■□□ 2.25
BBC3-204ENST00000449228 CALM2P0DP24 149 aa29.09■■■□□ 2.25
BBC3-204ENST00000449228 CALM3P0DP25 149 aa29.09■■■□□ 2.25
BBC3-204ENST00000449228 NIM1KQ8IY84 436 aa29.09■■■□□ 2.25
BBC3-204ENST00000449228 NUP133Q8WUM0 1156 aa29.09■■■□□ 2.25
BBC3-204ENST00000449228 CHAMP1Q96JM3 812 aa29.09■■■□□ 2.25
BBC3-204ENST00000449228 DDX60LQ5H9U9 1706 aaKnown RBP29.09■■■□□ 2.25
BBC3-204ENST00000449228 CSPP1Q1MSJ5 1256 aa29.08■■■□□ 2.25
BBC3-204ENST00000449228 FERMT3Q86UX7 667 aa29.08■■■□□ 2.25
BBC3-204ENST00000449228 FOCADQ5VW36 1801 aa29.08■■■□□ 2.25
BBC3-204ENST00000449228 PPFIA3O75145 1194 aa29.08■■■□□ 2.25
BBC3-204ENST00000449228 TSPY3P0CV98 308 aa29.08■■■□□ 2.25
BBC3-204ENST00000449228 TSPY8P0CW00 308 aa29.08■■■□□ 2.25
BBC3-204ENST00000449228 IARSP41252 1262 aaKnown RBP29.08■■■□□ 2.25
BBC3-204ENST00000449228 FANCBQ8NB91 859 aa29.08■■■□□ 2.25
BBC3-204ENST00000449228 DDX49Q9Y6V7 483 aaKnown RBP29.08■■■□□ 2.25
BBC3-204ENST00000449228 CDK8P49336 464 aa29.07■■■□□ 2.24
BBC3-204ENST00000449228 RSBN1LQ6PCB5 846 aaPredicted RBP29.07■■■□□ 2.24
BBC3-204ENST00000449228 RGS22Q8NE09 1264 aa29.07■■■□□ 2.24
BBC3-204ENST00000449228 TAOK3Q9H2K8 898 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms