RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 EVX2Q03828 476 aa22.79■■□□□ 1.24
RPS28-202ENST00000449223 PDE4BQ07343 736 aa22.79■■□□□ 1.24
RPS28-202ENST00000449223 C16orf86Q6ZW13 317 aa22.79■■□□□ 1.24
RPS28-202ENST00000449223 SAMD7Q7Z3H4 446 aa22.79■■□□□ 1.24
RPS28-202ENST00000449223 SAP30BPQ9UHR5 308 aaKnown RBP22.79■■□□□ 1.24
RPS28-202ENST00000449223 WDR90Q96KV7 1748 aa22.79■■□□□ 1.24
RPS28-202ENST00000449223 CNTNAP1P78357 1384 aa22.78■■□□□ 1.24
RPS28-202ENST00000449223 CPA1P15085 419 aa22.78■■□□□ 1.24
RPS28-202ENST00000449223 METTL16Q86W50 562 aaKnown RBP22.78■■□□□ 1.24
RPS28-202ENST00000449223 FAM151AQ8WW52 585 aa22.78■■□□□ 1.24
RPS28-202ENST00000449223 TBC1D2Q9BYX2 928 aa22.78■■□□□ 1.24
RPS28-202ENST00000449223 PDRG1Q9NUG6 133 aa22.78■■□□□ 1.24
RPS28-202ENST00000449223 CLRN2A0PK11 232 aa22.77■■□□□ 1.24
RPS28-202ENST00000449223 EPS15P42566 896 aa22.77■■□□□ 1.24
RPS28-202ENST00000449223 BECN1Q14457 450 aa22.77■■□□□ 1.24
RPS28-202ENST00000449223 TBC1D10BQ4KMP7 808 aaPredicted RBP22.77■■□□□ 1.24
RPS28-202ENST00000449223 ZFPM1Q8IX07 1006 aa22.77■■□□□ 1.24
RPS28-202ENST00000449223 ZNF287Q9HBT7 754 aa22.77■■□□□ 1.24
RPS28-202ENST00000449223 ADARB2Q9NS39 739 aaKnown RBP22.77■■□□□ 1.24
RPS28-202ENST00000449223 MYH8P13535 1937 aa22.77■■□□□ 1.24
RPS28-202ENST00000449223 B4E1Z4 1266 aa22.77■■□□□ 1.24
RPS28-202ENST00000449223 HLA-DOAP06340 250 aa22.77■■□□□ 1.24
RPS28-202ENST00000449223 LMOD1P29536 600 aaPredicted RBP22.77■■□□□ 1.24
RPS28-202ENST00000449223 ANTXR2P58335 489 aa22.77■■□□□ 1.24
RPS28-202ENST00000449223 TNFAIP1Q13829 316 aa22.77■■□□□ 1.24
RPS28-202ENST00000449223 ANKRD1Q15327 319 aa22.77■■□□□ 1.24
RPS28-202ENST00000449223 SH3BP5LQ7L8J4 393 aa22.77■■□□□ 1.24
RPS28-202ENST00000449223 ESR2Q92731 530 aa22.77■■□□□ 1.24
RPS28-202ENST00000449223 NKX2-3Q8TAU0 364 aa22.76■■□□□ 1.23
RPS28-202ENST00000449223 TRPM4Q8TD43 1214 aa22.76■■□□□ 1.23
RPS28-202ENST00000449223 IPO9Q96P70 1041 aaKnown RBP22.76■■□□□ 1.23
RPS28-202ENST00000449223 INCENPQ9NQS7 918 aa22.76■■□□□ 1.23
RPS28-202ENST00000449223 PI4KBQ9UBF8 816 aa22.76■■□□□ 1.23
RPS28-202ENST00000449223 SERPINB13Q9UIV8 391 aa22.76■■□□□ 1.23
RPS28-202ENST00000449223 DDTLA6NHG4 134 aaPredicted RBP22.75■■□□□ 1.23
RPS28-202ENST00000449223 AK2P54819 239 aa22.75■■□□□ 1.23
RPS28-202ENST00000449223 TCP10Q12799 353 aa22.75■■□□□ 1.23
RPS28-202ENST00000449223 HSCBQ8IWL3 235 aa22.75■■□□□ 1.23
RPS28-202ENST00000449223 ZSWIM5Q9P217 1185 aa22.75■■□□□ 1.23
RPS28-202ENST00000449223 SWAP70Q9UH65 585 aa22.75■■□□□ 1.23
RPS28-202ENST00000449223 PGAP2Q9UHJ9 254 aa22.75■■□□□ 1.23
RPS28-202ENST00000449223 K7ELQ4 463 aaPredicted RBP22.74■■□□□ 1.23
RPS28-202ENST00000449223 KDM4AO75164 1064 aa22.74■■□□□ 1.23
RPS28-202ENST00000449223 TNNI2P48788 182 aa22.74■■□□□ 1.23
RPS28-202ENST00000449223 TOB2Q14106 344 aaPredicted RBP22.74■■□□□ 1.23
RPS28-202ENST00000449223 RBM26Q5T8P6 1007 aaKnown RBP22.74■■□□□ 1.23
RPS28-202ENST00000449223 CYB5R4Q7L1T6 521 aa22.74■■□□□ 1.23
RPS28-202ENST00000449223 DYNLL2Q96FJ2 89 aa22.74■■□□□ 1.23
RPS28-202ENST00000449223 TMEM87BQ96K49 555 aa22.74■■□□□ 1.23
RPS28-202ENST00000449223 VEZTQ9HBM0 779 aa22.74■■□□□ 1.23
RPS28-202ENST00000449223 PITPNM2Q9BZ72 1349 aa22.74■■□□□ 1.23
RPS28-202ENST00000449223 TCP10L2B9ZVM9 353 aa22.73■■□□□ 1.23
RPS28-202ENST00000449223 PRC1O43663 620 aa22.73■■□□□ 1.23
RPS28-202ENST00000449223 CDK8P49336 464 aa22.73■■□□□ 1.23
RPS28-202ENST00000449223 HIRAP54198 1017 aaPredicted RBP22.73■■□□□ 1.23
RPS28-202ENST00000449223 EVCP57679 992 aa22.73■■□□□ 1.23
RPS28-202ENST00000449223 FOXP4Q8IVH2 680 aaPredicted RBP22.73■■□□□ 1.23
RPS28-202ENST00000449223 HACL1Q9UJ83 578 aa22.73■■□□□ 1.23
RPS28-202ENST00000449223 GREB1LQ9C091 1923 aaPredicted RBP22.73■■□□□ 1.23
RPS28-202ENST00000449223 SLC4A8Q2Y0W8 1093 aa22.72■■□□□ 1.23
RPS28-202ENST00000449223 PLIN4Q96Q06 1357 aa22.72■■□□□ 1.23
RPS28-202ENST00000449223 DCAF8L1A6NGE4 600 aa22.72■■□□□ 1.23
RPS28-202ENST00000449223 PRDM1O75626 825 aa22.72■■□□□ 1.23
RPS28-202ENST00000449223 RASA1P20936 1047 aa22.72■■□□□ 1.23
RPS28-202ENST00000449223 Q6ZUG5 572 aa22.72■■□□□ 1.23
RPS28-202ENST00000449223 APOBEC3FQ8IUX4 373 aaKnown RBP22.72■■□□□ 1.23
RPS28-202ENST00000449223 TCEANC2Q96MN5 208 aa22.72■■□□□ 1.23
RPS28-202ENST00000449223 IQCA1LA6NCM1 817 aa22.71■■□□□ 1.23
RPS28-202ENST00000449223 LIFRP42702 1097 aa22.71■■□□□ 1.23
RPS28-202ENST00000449223 RRP12Q5JTH9 1297 aaKnown RBP22.71■■□□□ 1.23
RPS28-202ENST00000449223 USP50Q70EL3 339 aaPredicted RBP22.71■■□□□ 1.23
RPS28-202ENST00000449223 SLC44A5Q8NCS7 719 aa22.71■■□□□ 1.23
RPS28-202ENST00000449223 IGDCC4Q8TDY8 1250 aa22.71■■□□□ 1.23
RPS28-202ENST00000449223 DNAJC18Q9H819 358 aa22.71■■□□□ 1.23
RPS28-202ENST00000449223 MKNK2Q9HBH9 465 aa22.71■■□□□ 1.23
RPS28-202ENST00000449223 TOMM22Q9NS69 142 aa22.71■■□□□ 1.23
RPS28-202ENST00000449223 HERC5Q9UII4 1024 aaKnown RBP22.71■■□□□ 1.23
RPS28-202ENST00000449223 LIMCH1Q9UPQ0 1083 aa22.71■■□□□ 1.23
RPS28-202ENST00000449223 ASTN2O75129 1339 aaPredicted RBP22.7■■□□□ 1.22
RPS28-202ENST00000449223 SH2B2O14492 632 aaPredicted RBP22.7■■□□□ 1.22
RPS28-202ENST00000449223 TBC1D12O60347 775 aa22.7■■□□□ 1.22
RPS28-202ENST00000449223 SHMT1P34896 483 aa22.7■■□□□ 1.22
RPS28-202ENST00000449223 MAP3K10Q02779 954 aa22.7■■□□□ 1.22
RPS28-202ENST00000449223 CHST3Q7LGC8 479 aa22.7■■□□□ 1.22
RPS28-202ENST00000449223 ZSCAN29Q8IWY8 852 aaPredicted RBP22.7■■□□□ 1.22
RPS28-202ENST00000449223 STK11IPQ8N1F8 1099 aa22.7■■□□□ 1.22
RPS28-202ENST00000449223 TEPSINQ96N21 525 aa22.7■■□□□ 1.22
RPS28-202ENST00000449223 CSRNP1Q96S65 589 aa22.7■■□□□ 1.22
RPS28-202ENST00000449223 TCP11L1Q9NUJ3 509 aa22.7■■□□□ 1.22
RPS28-202ENST00000449223 ANGEL1Q9UNK9 670 aaKnown RBP22.7■■□□□ 1.22
RPS28-202ENST00000449223 RANBP6O60518 1105 aaKnown RBP22.69■■□□□ 1.22
RPS28-202ENST00000449223 RASA3Q14644 834 aa22.69■■□□□ 1.22
RPS28-202ENST00000449223 SART3Q15020 963 aaKnown RBP22.69■■□□□ 1.22
RPS28-202ENST00000449223 TATDN1Q6P1N9 297 aa22.69■■□□□ 1.22
RPS28-202ENST00000449223 SGMS1Q86VZ5 419 aa22.69■■□□□ 1.22
RPS28-202ENST00000449223 IQCA1Q86XH1 822 aa22.69■■□□□ 1.22
RPS28-202ENST00000449223 TMX3Q96JJ7 454 aa22.69■■□□□ 1.22
RPS28-202ENST00000449223 ZSCAN31Q96LW9 406 aaPredicted RBP22.69■■□□□ 1.22
RPS28-202ENST00000449223 TMEM39BQ9GZU3 492 aa22.69■■□□□ 1.22
RPS28-202ENST00000449223 PPP2R3BQ9Y5P8 575 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms