RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 IFIT2P09913 472 aaKnown RBP21.57■■□□□ 1.04
DDX56-207ENST00000448192 DYNLL1P63167 89 aaKnown RBP21.57■■□□□ 1.04
DDX56-207ENST00000448192 MAGEB6Q8N7X4 407 aa21.57■■□□□ 1.04
DDX56-207ENST00000448192 AFG3L2Q9Y4W6 797 aa21.57■■□□□ 1.04
DDX56-207ENST00000448192 SIPA1L1O43166 1804 aa21.57■■□□□ 1.04
DDX56-207ENST00000448192 TRIM75PA6NK02 468 aa21.56■■□□□ 1.04
DDX56-207ENST00000448192 MAP3K12Q12852 859 aa21.56■■□□□ 1.04
DDX56-207ENST00000448192 KIF22Q14807 665 aa21.56■■□□□ 1.04
DDX56-207ENST00000448192 GADL1Q6ZQY3 521 aa21.56■■□□□ 1.04
DDX56-207ENST00000448192 CCDC84Q86UT8 332 aaPredicted RBP21.56■■□□□ 1.04
DDX56-207ENST00000448192 MIGA1Q8NAN2 632 aa21.56■■□□□ 1.04
DDX56-207ENST00000448192 DHX36Q9H2U1 1008 aaKnown RBP21.56■■□□□ 1.04
DDX56-207ENST00000448192 PI4KBQ9UBF8 816 aa21.56■■□□□ 1.04
DDX56-207ENST00000448192 CPA4Q9UI42 421 aa21.56■■□□□ 1.04
DDX56-207ENST00000448192 HTTP42858 3142 aa21.56■■□□□ 1.04
DDX56-207ENST00000448192 FLT1P17948 1338 aa21.55■■□□□ 1.04
DDX56-207ENST00000448192 MYH1P12882 1939 aa21.55■■□□□ 1.04
DDX56-207ENST00000448192 A0A0G2JLL6 359 aaPredicted RBP21.55■■□□□ 1.04
DDX56-207ENST00000448192 ECM2O94769 699 aaPredicted RBP21.55■■□□□ 1.04
DDX56-207ENST00000448192 GPAT2Q6NUI2 795 aa21.55■■□□□ 1.04
DDX56-207ENST00000448192 FASTKD5Q7L8L6 764 aaKnown RBP21.55■■□□□ 1.04
DDX56-207ENST00000448192 PRRT2Q7Z6L0 340 aaPredicted RBP21.55■■□□□ 1.04
DDX56-207ENST00000448192 SAP30BPQ9UHR5 308 aaKnown RBP21.55■■□□□ 1.04
DDX56-207ENST00000448192 HERC5Q9UII4 1024 aaKnown RBP21.55■■□□□ 1.04
DDX56-207ENST00000448192 TNRC18O15417 2968 aaPredicted RBP21.54■■□□□ 1.04
DDX56-207ENST00000448192 LACTBP83111 547 aaPredicted RBP21.54■■□□□ 1.04
DDX56-207ENST00000448192 C17orf99Q6UX52 265 aa21.54■■□□□ 1.04
DDX56-207ENST00000448192 ARHGAP39Q9C0H5 1083 aa21.54■■□□□ 1.04
DDX56-207ENST00000448192 PALD1Q9ULE6 856 aa21.54■■□□□ 1.04
DDX56-207ENST00000448192 CENPFP49454 3210 aa21.53■■□□□ 1.04
DDX56-207ENST00000448192 CAP2P40123 477 aa21.53■■□□□ 1.04
DDX56-207ENST00000448192 RRP1BQ14684 758 aaKnown RBP21.53■■□□□ 1.04
DDX56-207ENST00000448192 TTF1Q15361 905 aaPredicted RBP21.53■■□□□ 1.04
DDX56-207ENST00000448192 CRACR2BQ8N4Y2 399 aaPredicted RBP21.53■■□□□ 1.04
DDX56-207ENST00000448192 PARK7Q99497 189 aaKnown RBP21.53■■□□□ 1.04
DDX56-207ENST00000448192 DNAJC2Q99543 621 aaKnown RBP21.53■■□□□ 1.04
DDX56-207ENST00000448192 TRIM34Q9BYJ4 488 aa21.53■■□□□ 1.04
DDX56-207ENST00000448192 CYP2C8P10632 490 aa21.52■■□□□ 1.04
DDX56-207ENST00000448192 SLC4A8Q2Y0W8 1093 aa21.52■■□□□ 1.04
DDX56-207ENST00000448192 GOLIM4O00461 696 aa21.51■■□□□ 1.03
DDX56-207ENST00000448192 USP5P45974 858 aa21.51■■□□□ 1.03
DDX56-207ENST00000448192 CERS3Q8IU89 383 aa21.51■■□□□ 1.03
DDX56-207ENST00000448192 FOXP4Q8IVH2 680 aaPredicted RBP21.51■■□□□ 1.03
DDX56-207ENST00000448192 PTCH2Q9Y6C5 1203 aa21.51■■□□□ 1.03
DDX56-207ENST00000448192 ADGRA2Q96PE1 1338 aa21.51■■□□□ 1.03
DDX56-207ENST00000448192 HLA-DOAP06340 250 aa21.5■■□□□ 1.03
DDX56-207ENST00000448192 SPP2Q13103 211 aa21.5■■□□□ 1.03
DDX56-207ENST00000448192 SLC9C2Q5TAH2 1124 aa21.5■■□□□ 1.03
DDX56-207ENST00000448192 TMED8Q6PL24 325 aaPredicted RBP21.5■■□□□ 1.03
DDX56-207ENST00000448192 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.5■■□□□ 1.03
DDX56-207ENST00000448192 USP17L5A8MUK1 530 aa21.49■■□□□ 1.03
DDX56-207ENST00000448192 ZNF280CQ8ND82 737 aa21.49■■□□□ 1.03
DDX56-207ENST00000448192 LRRCC1Q9C099 1032 aa21.49■■□□□ 1.03
DDX56-207ENST00000448192 DNAJC18Q9H819 358 aa21.49■■□□□ 1.03
DDX56-207ENST00000448192 MGAMO43451 1857 aa21.49■■□□□ 1.03
DDX56-207ENST00000448192 MAGEB6P1A0A0J9YX57 407 aa21.48■■□□□ 1.03
DDX56-207ENST00000448192 SMARCA5O60264 1052 aaPredicted RBP21.48■■□□□ 1.03
DDX56-207ENST00000448192 PDE6AP16499 860 aa21.48■■□□□ 1.03
DDX56-207ENST00000448192 PSMC4P43686 418 aa21.48■■□□□ 1.03
DDX56-207ENST00000448192 SLC9C1Q4G0N8 1177 aa21.48■■□□□ 1.03
DDX56-207ENST00000448192 METTL16Q86W50 562 aaKnown RBP21.48■■□□□ 1.03
DDX56-207ENST00000448192 EDC3Q96F86 508 aaKnown RBP21.48■■□□□ 1.03
DDX56-207ENST00000448192 TBC1D2Q9BYX2 928 aa21.48■■□□□ 1.03
DDX56-207ENST00000448192 BOLA2Q9H3K6 86 aa21.48■■□□□ 1.03
DDX56-207ENST00000448192 AS3MTQ9HBK9 375 aa21.48■■□□□ 1.03
DDX56-207ENST00000448192 SLC45A1Q9Y2W3 748 aa21.48■■□□□ 1.03
DDX56-207ENST00000448192 LOC285556D6RIA3 1793 aa21.48■■□□□ 1.03
DDX56-207ENST00000448192 FMNL1O95466 1100 aaPredicted RBP21.47■■□□□ 1.03
DDX56-207ENST00000448192 GNRH1P01148 92 aa21.47■■□□□ 1.03
DDX56-207ENST00000448192 ASNSP08243 561 aa21.47■■□□□ 1.03
DDX56-207ENST00000448192 CTGFP29279 349 aa21.47■■□□□ 1.03
DDX56-207ENST00000448192 TREML2Q5T2D2 321 aa21.47■■□□□ 1.03
DDX56-207ENST00000448192 SMCR8Q8TEV9 937 aaPredicted RBP21.47■■□□□ 1.03
DDX56-207ENST00000448192 ARMC5Q96C12 935 aa21.47■■□□□ 1.03
DDX56-207ENST00000448192 TRIM47Q96LD4 638 aa21.47■■□□□ 1.03
DDX56-207ENST00000448192 PAG1Q9NWQ8 432 aa21.47■■□□□ 1.03
DDX56-207ENST00000448192 AGTPBP1Q9UPW5 1226 aa21.47■■□□□ 1.03
DDX56-207ENST00000448192 NAV1Q8NEY1 1877 aa21.47■■□□□ 1.03
DDX56-207ENST00000448192 GDF11O95390 407 aa21.46■■□□□ 1.03
DDX56-207ENST00000448192 BCRP11274 1271 aa21.46■■□□□ 1.03
DDX56-207ENST00000448192 ATP5JP18859 108 aa21.46■■□□□ 1.03
DDX56-207ENST00000448192 HMGCS2P54868 508 aa21.46■■□□□ 1.03
DDX56-207ENST00000448192 JAG1P78504 1218 aa21.46■■□□□ 1.03
DDX56-207ENST00000448192 NBPF11Q86T75 865 aa21.46■■□□□ 1.03
DDX56-207ENST00000448192 PROCA1Q8NCQ7 364 aaPredicted RBP21.46■■□□□ 1.03
DDX56-207ENST00000448192 RIOK1Q9BRS2 568 aaKnown RBP21.46■■□□□ 1.03
DDX56-207ENST00000448192 ZNF532Q9HCE3 1301 aa21.46■■□□□ 1.03
DDX56-207ENST00000448192 MYH7P12883 1935 aa21.45■■□□□ 1.02
DDX56-207ENST00000448192 SHROOM1Q2M3G4 852 aaPredicted RBP21.45■■□□□ 1.02
DDX56-207ENST00000448192 YTHDC1Q96MU7 727 aaKnown RBP21.45■■□□□ 1.02
DDX56-207ENST00000448192 RBBP6Q7Z6E9 1792 aaKnown RBP21.45■■□□□ 1.02
DDX56-207ENST00000448192 POTEFA5A3E0 1075 aa21.44■■□□□ 1.02
DDX56-207ENST00000448192 HOXD10P28358 340 aa21.44■■□□□ 1.02
DDX56-207ENST00000448192 PRMT2P55345 433 aa21.44■■□□□ 1.02
DDX56-207ENST00000448192 TTC6Q86TZ1 520 aa21.44■■□□□ 1.02
DDX56-207ENST00000448192 CRNKL1Q9BZJ0 848 aaKnown RBP21.44■■□□□ 1.02
DDX56-207ENST00000448192 SRRDQ9UH36 339 aa21.44■■□□□ 1.02
DDX56-207ENST00000448192 PNMA3Q9UL41 463 aa21.44■■□□□ 1.02
DDX56-207ENST00000448192 TCRBV5S4A2TA0A5A2 114 aa21.43■■□□□ 1.02
DDX56-207ENST00000448192 MYCP01106 439 aaPredicted RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms