RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 TRIM34Q9BYJ4 488 aa14.36□□□□□ -0.11
RFC4-208ENST00000447345 HLA-DOAP06340 250 aa14.35□□□□□ -0.11
RFC4-208ENST00000447345 ZFYP08048 801 aaPredicted RBP14.35□□□□□ -0.11
RFC4-208ENST00000447345 OSBP2Q969R2 916 aa14.35□□□□□ -0.11
RFC4-208ENST00000447345 EVI5LQ96CN4 794 aa14.35□□□□□ -0.11
RFC4-208ENST00000447345 SEC62Q99442 399 aaKnown RBP14.35□□□□□ -0.11
RFC4-208ENST00000447345 BEGAINQ9BUH8 593 aa14.35□□□□□ -0.11
RFC4-208ENST00000447345 DHX36Q9H2U1 1008 aaKnown RBP14.35□□□□□ -0.11
RFC4-208ENST00000447345 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.35□□□□□ -0.11
RFC4-208ENST00000447345 TSKSQ9UJT2 592 aa14.35□□□□□ -0.11
RFC4-208ENST00000447345 SLC4A4Q9Y6R1 1079 aa14.35□□□□□ -0.11
RFC4-208ENST00000447345 UNCXA6NJT0 531 aa14.34□□□□□ -0.11
RFC4-208ENST00000447345 FOXN1O15353 648 aa14.34□□□□□ -0.11
RFC4-208ENST00000447345 POLR3DP05423 398 aaPredicted RBP14.34□□□□□ -0.11
RFC4-208ENST00000447345 EVX2Q03828 476 aa14.34□□□□□ -0.11
RFC4-208ENST00000447345 LRRFIP1Q32MZ4 808 aaKnown RBP14.34□□□□□ -0.11
RFC4-208ENST00000447345 DCP1AQ9NPI6 582 aaPredicted RBP14.34□□□□□ -0.11
RFC4-208ENST00000447345 WBP1LQ9NX94 342 aa14.34□□□□□ -0.11
RFC4-208ENST00000447345 MCM9Q9NXL9 1143 aa14.34□□□□□ -0.11
RFC4-208ENST00000447345 PI4KBQ9UBF8 816 aa14.34□□□□□ -0.11
RFC4-208ENST00000447345 ZNF112Q9UJU3 913 aa14.34□□□□□ -0.11
RFC4-208ENST00000447345 CASP8AP2Q9UKL3 1982 aa14.34□□□□□ -0.11
RFC4-208ENST00000447345 SPDYE5A6NIY4 337 aa14.33□□□□□ -0.12
RFC4-208ENST00000447345 PHF20L1A8MW92 1017 aa14.33□□□□□ -0.12
RFC4-208ENST00000447345 GPAA1O43292 621 aa14.33□□□□□ -0.12
RFC4-208ENST00000447345 ZBTB48P10074 688 aaPredicted RBP14.33□□□□□ -0.12
RFC4-208ENST00000447345 CYP2D6P10635 497 aa14.33□□□□□ -0.12
RFC4-208ENST00000447345 CCDC84Q86UT8 332 aaPredicted RBP14.33□□□□□ -0.12
RFC4-208ENST00000447345 SCYL3Q8IZE3 742 aa14.33□□□□□ -0.12
RFC4-208ENST00000447345 CCDC136Q96JN2 1154 aa14.33□□□□□ -0.12
RFC4-208ENST00000447345 OSBPL3Q9H4L5 887 aa14.33□□□□□ -0.12
RFC4-208ENST00000447345 DNAJC18Q9H819 358 aa14.33□□□□□ -0.12
RFC4-208ENST00000447345 HERC5Q9UII4 1024 aaKnown RBP14.33□□□□□ -0.12
RFC4-208ENST00000447345 CYP2D7A0A087X1C5 515 aa14.32□□□□□ -0.12
RFC4-208ENST00000447345 TBC1D12O60347 775 aa14.32□□□□□ -0.12
RFC4-208ENST00000447345 GDF11O95390 407 aa14.32□□□□□ -0.12
RFC4-208ENST00000447345 SREBF2Q12772 1141 aa14.32□□□□□ -0.12
RFC4-208ENST00000447345 NOL9Q5SY16 702 aaKnown RBP14.32□□□□□ -0.12
RFC4-208ENST00000447345 CCDC129Q6ZRS4 1044 aa14.32□□□□□ -0.12
RFC4-208ENST00000447345 CENPQQ7L2Z9 268 aaPredicted RBP14.32□□□□□ -0.12
RFC4-208ENST00000447345 SKAP1Q86WV1 359 aa14.32□□□□□ -0.12
RFC4-208ENST00000447345 ERO1BQ86YB8 467 aa14.32□□□□□ -0.12
RFC4-208ENST00000447345 STRBPQ96SI9 672 aaKnown RBP14.32□□□□□ -0.12
RFC4-208ENST00000447345 PICK1Q9NRD5 415 aa14.32□□□□□ -0.12
RFC4-208ENST00000447345 LOC285556D6RIA3 1793 aa14.32□□□□□ -0.12
RFC4-208ENST00000447345 MANSC4A6NHS7 340 aaPredicted RBP14.31□□□□□ -0.12
RFC4-208ENST00000447345 PLCD1P51178 756 aa14.31□□□□□ -0.12
RFC4-208ENST00000447345 MAP3K10Q02779 954 aa14.31□□□□□ -0.12
RFC4-208ENST00000447345 RRP1BQ14684 758 aaKnown RBP14.31□□□□□ -0.12
RFC4-208ENST00000447345 SHROOM1Q2M3G4 852 aaPredicted RBP14.31□□□□□ -0.12
RFC4-208ENST00000447345 ZMYM1Q5SVZ6 1142 aa14.31□□□□□ -0.12
RFC4-208ENST00000447345 TTC6Q86TZ1 520 aa14.31□□□□□ -0.12
RFC4-208ENST00000447345 DDRGK1Q96HY6 314 aa14.31□□□□□ -0.12
RFC4-208ENST00000447345 FAM227BQ96M60 508 aa14.31□□□□□ -0.12
RFC4-208ENST00000447345 LAMA4Q16363 1823 aa14.31□□□□□ -0.12
RFC4-208ENST00000447345 CCL15-CCL14A0A0B4J2E2 113 aa14.3□□□□□ -0.12
RFC4-208ENST00000447345 A0A0D9SFI3 127 aa14.3□□□□□ -0.12
RFC4-208ENST00000447345 SMIM22K7EJ46 135 aa14.3□□□□□ -0.12
RFC4-208ENST00000447345 IRF6O14896 467 aa14.3□□□□□ -0.12
RFC4-208ENST00000447345 CTNND1O60716 968 aaKnown RBP14.3□□□□□ -0.12
RFC4-208ENST00000447345 TRPA1O75762 1119 aa14.3□□□□□ -0.12
RFC4-208ENST00000447345 APPP05067 770 aa14.3□□□□□ -0.12
RFC4-208ENST00000447345 GSPT1P15170 499 aaKnown RBP14.3□□□□□ -0.12
RFC4-208ENST00000447345 NMIQ13287 307 aaPredicted RBP14.3□□□□□ -0.12
RFC4-208ENST00000447345 PPIL2Q13356 520 aa14.3□□□□□ -0.12
RFC4-208ENST00000447345 CCL15Q16663 113 aa14.3□□□□□ -0.12
RFC4-208ENST00000447345 TTC22Q5TAA0 569 aa14.3□□□□□ -0.12
RFC4-208ENST00000447345 FOXP4Q8IVH2 680 aaPredicted RBP14.3□□□□□ -0.12
RFC4-208ENST00000447345 EPB41L4AQ9HCS5 686 aaPredicted RBP14.3□□□□□ -0.12
RFC4-208ENST00000447345 ATP8A2Q9NTI2 1148 aa14.3□□□□□ -0.12
RFC4-208ENST00000447345 RNF186Q9NXI6 227 aa14.3□□□□□ -0.12
RFC4-208ENST00000447345 SERPINB13Q9UIV8 391 aa14.3□□□□□ -0.12
RFC4-208ENST00000447345 USP17L12C9JPN9 530 aa14.29□□□□□ -0.12
RFC4-208ENST00000447345 USP17L21D6R901 530 aa14.29□□□□□ -0.12
RFC4-208ENST00000447345 HSPA8P11142 646 aaKnown RBP14.29□□□□□ -0.12
RFC4-208ENST00000447345 PTPRAP18433 802 aa14.29□□□□□ -0.12
RFC4-208ENST00000447345 TDO2P48775 406 aa14.29□□□□□ -0.12
RFC4-208ENST00000447345 PPATQ06203 517 aa14.29□□□□□ -0.12
RFC4-208ENST00000447345 AMOTL1Q8IY63 956 aa14.29□□□□□ -0.12
RFC4-208ENST00000447345 STK11IPQ8N1F8 1099 aa14.29□□□□□ -0.12
RFC4-208ENST00000447345 SLC44A5Q8NCS7 719 aa14.29□□□□□ -0.12
RFC4-208ENST00000447345 DYNLL2Q96FJ2 89 aa14.29□□□□□ -0.12
RFC4-208ENST00000447345 EHD4Q9H223 541 aa14.29□□□□□ -0.12
RFC4-208ENST00000447345 ZHX2Q9Y6X8 837 aa14.29□□□□□ -0.12
RFC4-208ENST00000447345 TRIM75PA6NK02 468 aa14.28□□□□□ -0.12
RFC4-208ENST00000447345 GSG1L2A8MUP6 293 aa14.28□□□□□ -0.12
RFC4-208ENST00000447345 IGF2BP3O00425 579 aaKnown RBP eCLIP14.28□□□□□ -0.12
RFC4-208ENST00000447345 GNAT2P19087 354 aa14.28□□□□□ -0.12
RFC4-208ENST00000447345 CAP2P40123 477 aa14.28□□□□□ -0.12
RFC4-208ENST00000447345 TM4SF4P48230 202 aa14.28□□□□□ -0.12
RFC4-208ENST00000447345 CTCFP49711 727 aaPredicted RBP14.28□□□□□ -0.12
RFC4-208ENST00000447345 GTF2A2P52657 109 aa14.28□□□□□ -0.12
RFC4-208ENST00000447345 LBX1P52954 281 aa14.28□□□□□ -0.12
RFC4-208ENST00000447345 JAG1P78504 1218 aa14.28□□□□□ -0.12
RFC4-208ENST00000447345 SNAPC2Q13487 334 aa14.28□□□□□ -0.12
RFC4-208ENST00000447345 METTL16Q86W50 562 aaKnown RBP14.28□□□□□ -0.12
RFC4-208ENST00000447345 IFNL1Q8IU54 200 aa14.28□□□□□ -0.12
RFC4-208ENST00000447345 REM2Q8IYK8 340 aaPredicted RBP14.28□□□□□ -0.12
RFC4-208ENST00000447345 BRI3BPQ8WY22 251 aa14.28□□□□□ -0.12
RFC4-208ENST00000447345 MS4A4AQ96JQ5 239 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms