RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 ECM2O94769 699 aaPredicted RBP8.78□□□□□ -1
SMG1-202ENST00000446231 EPN1Q9Y6I3 576 aaPredicted RBP8.78□□□□□ -1
SMG1-202ENST00000446231 FBXW10Q5XX13 1052 aa8.78□□□□□ -1
SMG1-202ENST00000446231 CCHCR1Q8TD31 782 aa8.78□□□□□ -1
SMG1-202ENST00000446231 ELF1P32519 619 aa8.78□□□□□ -1
SMG1-202ENST00000446231 FBXO41Q8TF61 875 aa8.78□□□□□ -1
SMG1-202ENST00000446231 LRP2BPQ9P2M1 347 aa8.78□□□□□ -1
SMG1-202ENST00000446231 RASSF10A6NK89 507 aa8.77□□□□□ -1
SMG1-202ENST00000446231 KRT40Q6A162 431 aa8.77□□□□□ -1
SMG1-202ENST00000446231 RAB34Q9BZG1 259 aa8.77□□□□□ -1
SMG1-202ENST00000446231 MGARPQ8TDB4 240 aa8.77□□□□□ -1.01
SMG1-202ENST00000446231 RANBP6O60518 1105 aaKnown RBP8.77□□□□□ -1.01
SMG1-202ENST00000446231 RANBP1P43487 201 aa8.77□□□□□ -1.01
SMG1-202ENST00000446231 NUCKS1Q9H1E3 243 aaKnown RBP8.77□□□□□ -1.01
SMG1-202ENST00000446231 PCF11O94913 1555 aaKnown RBP8.77□□□□□ -1.01
SMG1-202ENST00000446231 PNMA6EA0A0J9YXQ4 647 aa8.77□□□□□ -1.01
SMG1-202ENST00000446231 KRIT1O00522 736 aa8.77□□□□□ -1.01
SMG1-202ENST00000446231 CCDC174Q6PII3 467 aa8.77□□□□□ -1.01
SMG1-202ENST00000446231 P3H4Q92791 437 aa8.77□□□□□ -1.01
SMG1-202ENST00000446231 SOWAHDA6NJG2 315 aa8.77□□□□□ -1.01
SMG1-202ENST00000446231 IL13P35225 146 aa8.77□□□□□ -1.01
SMG1-202ENST00000446231 SFMBT2Q5VUG0 894 aa8.77□□□□□ -1.01
SMG1-202ENST00000446231 COL17A1Q9UMD9 1497 aaPredicted RBP8.77□□□□□ -1.01
SMG1-202ENST00000446231 TARSL2A2RTX5 802 aaKnown RBP8.77□□□□□ -1.01
SMG1-202ENST00000446231 WTAPQ15007 396 aa8.77□□□□□ -1.01
SMG1-202ENST00000446231 VPS16Q9H269 839 aa8.77□□□□□ -1.01
SMG1-202ENST00000446231 FAM184BQ9ULE4 1060 aa8.77□□□□□ -1.01
SMG1-202ENST00000446231 SESN3P58005 492 aa8.77□□□□□ -1.01
SMG1-202ENST00000446231 MAP3K12Q12852 859 aa8.77□□□□□ -1.01
SMG1-202ENST00000446231 IFIT5Q13325 482 aaKnown RBP8.77□□□□□ -1.01
SMG1-202ENST00000446231 VWA3BQ502W6 1294 aa8.77□□□□□ -1.01
SMG1-202ENST00000446231 KIF6Q6ZMV9 814 aa8.77□□□□□ -1.01
SMG1-202ENST00000446231 C2CD5Q86YS7 1000 aa8.77□□□□□ -1.01
SMG1-202ENST00000446231 WHAMMQ8TF30 809 aa8.77□□□□□ -1.01
SMG1-202ENST00000446231 RILPL1Q5EBL4 403 aa8.77□□□□□ -1.01
SMG1-202ENST00000446231 CALML4Q96GE6 196 aa8.77□□□□□ -1.01
SMG1-202ENST00000446231 MRFAP1Q9Y605 127 aa8.77□□□□□ -1.01
SMG1-202ENST00000446231 TYW1BQ6NUM6 668 aa8.77□□□□□ -1.01
SMG1-202ENST00000446231 GRM8O00222 908 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 ERCC5P28715 1186 aaPredicted RBP8.76□□□□□ -1.01
SMG1-202ENST00000446231 CETN1Q12798 172 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 NLRP14Q86W24 1093 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 SERPINA10Q9UK55 444 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 MRPS25P82663 173 aaKnown RBP8.76□□□□□ -1.01
SMG1-202ENST00000446231 SEPT2Q15019 361 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 NOP53Q9NZM5 478 aaKnown RBP8.76□□□□□ -1.01
SMG1-202ENST00000446231 HGSO14964 777 aaPredicted RBP8.76□□□□□ -1.01
SMG1-202ENST00000446231 RBL2Q08999 1139 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 PAK1Q13153 545 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 RASIP1Q5U651 963 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 E4F1Q66K89 784 aaPredicted RBP8.76□□□□□ -1.01
SMG1-202ENST00000446231 TEX11Q8IYF3 940 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 SLC35F6Q8N357 371 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 PLIN2Q99541 437 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 MCUR1Q96AQ8 359 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 ANXA1P04083 346 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 RRAGAQ7L523 313 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 CALR3Q96L12 384 aaKnown RBP8.76□□□□□ -1.01
SMG1-202ENST00000446231 CLIC6Q96NY7 704 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 HAUS4Q9H6D7 363 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 KAT14Q9H8E8 782 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 TMEM110-MUSTN1A8MSY1 372 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 MINDY4BA8MYZ0 360 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 ATP5DP30049 168 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 PAG1Q9NWQ8 432 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 BAZ2BQ9UIF8 2168 aaKnown RBP8.76□□□□□ -1.01
SMG1-202ENST00000446231 DHX9Q08211 1270 aaKnown RBP8.76□□□□□ -1.01
SMG1-202ENST00000446231 TRIM31Q9BZY9 425 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 KIF9Q9HAQ2 790 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 SLMAPQ14BN4 828 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 TRIM58Q8NG06 486 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 HELLSQ9NRZ9 838 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 TMTC2Q8N394 836 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.76□□□□□ -1.012e-9■■■■■ 36.9
SMG1-202ENST00000446231 CNNM2Q9H8M5 875 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 MAPK8IP1Q9UQF2 711 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 HMGB1P1B2RPK0 211 aaPredicted RBP8.76□□□□□ -1.01
SMG1-202ENST00000446231 OPHN1O60890 802 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 CTNNA1P35221 906 aaKnown RBP8.76□□□□□ -1.01
SMG1-202ENST00000446231 DTNBP1Q96EV8 351 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 SMC6Q96SB8 1091 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 TTC21BQ7Z4L5 1316 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 HYOU1Q9Y4L1 999 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 CSGALNACT2Q8N6G5 542 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 ACRBPQ8NEB7 543 aa8.76□□□□□ -1.01
SMG1-202ENST00000446231 NOC4LQ9BVI4 516 aaKnown RBP8.76□□□□□ -1.01
SMG1-202ENST00000446231 FAM133BQ5BKY9 247 aaKnown RBP8.75□□□□□ -1.01
SMG1-202ENST00000446231 L2HGDHQ9H9P8 463 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 SCRN1Q12765 414 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 IQCDQ96DY2 449 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 KRT2P35908 639 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 AMOTQ4VCS5 1084 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 DDX21Q9NR30 783 aaKnown RBP eCLIP8.75□□□□□ -1.01
SMG1-202ENST00000446231 CALCOCO2Q13137 446 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 SCOCQ9UIL1 159 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 MSH6P52701 1360 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 UNC5CLQ8IV45 518 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 FAM135BQ49AJ0 1406 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 TAF11Q15544 211 aa8.75□□□□□ -1.01
SMG1-202ENST00000446231 PLEKHF1Q96S99 279 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms