RNA–Protein interactions for RNA: ENST00000444658.7

CCNDBP1-202, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-202ENST00000444658 SYT1P21579 422 aa10.84□□□□□ -0.67
CCNDBP1-202ENST00000444658 IARSP41252 1262 aaKnown RBP10.84□□□□□ -0.67
CCNDBP1-202ENST00000444658 SEC23AQ15436 765 aa10.84□□□□□ -0.67
CCNDBP1-202ENST00000444658 SKOR2Q2VWA4 1001 aaPredicted RBP10.84□□□□□ -0.67
CCNDBP1-202ENST00000444658 TMEM67Q5HYA8 995 aa10.84□□□□□ -0.67
CCNDBP1-202ENST00000444658 RSBN1LQ6PCB5 846 aaPredicted RBP10.84□□□□□ -0.67
CCNDBP1-202ENST00000444658 SYNE3Q6ZMZ3 975 aa10.84□□□□□ -0.67
CCNDBP1-202ENST00000444658 CHST3Q7LGC8 479 aa10.84□□□□□ -0.67
CCNDBP1-202ENST00000444658 DGKHQ86XP1 1220 aa10.84□□□□□ -0.67
CCNDBP1-202ENST00000444658 LARGE2Q8N3Y3 721 aa10.84□□□□□ -0.67
CCNDBP1-202ENST00000444658 NECAB1Q8N987 351 aa10.84□□□□□ -0.67
CCNDBP1-202ENST00000444658 ZSCAN10Q96SZ4 725 aaPredicted RBP10.84□□□□□ -0.67
CCNDBP1-202ENST00000444658 MAP3K14Q99558 947 aa10.84□□□□□ -0.67
CCNDBP1-202ENST00000444658 LARP6Q9BRS8 491 aaKnown RBP10.84□□□□□ -0.67
CCNDBP1-202ENST00000444658 LRRC2Q9BYS8 371 aa10.84□□□□□ -0.67
CCNDBP1-202ENST00000444658 DHX36Q9H2U1 1008 aaKnown RBP10.84□□□□□ -0.67
CCNDBP1-202ENST00000444658 CREBZFQ9NS37 354 aa10.84□□□□□ -0.67
CCNDBP1-202ENST00000444658 USP40Q9NVE5 1235 aa10.84□□□□□ -0.67
CCNDBP1-202ENST00000444658 BRPF3Q9ULD4 1205 aa10.84□□□□□ -0.67
CCNDBP1-202ENST00000444658 HPS5Q9UPZ3 1129 aa10.84□□□□□ -0.67
CCNDBP1-202ENST00000444658 ATP6V1DQ9Y5K8 247 aa10.84□□□□□ -0.67
CCNDBP1-202ENST00000444658 KIAA1551Q9HCM1 1747 aa10.84□□□□□ -0.67
CCNDBP1-202ENST00000444658 KLF18A0A0U1RQI7 1052 aa10.83□□□□□ -0.68
CCNDBP1-202ENST00000444658 CCDC196A0A1B0GTZ2 297 aa10.83□□□□□ -0.68
CCNDBP1-202ENST00000444658 GOLGA6L22H0YM25 854 aa10.83□□□□□ -0.68
CCNDBP1-202ENST00000444658 WDHD1O75717 1129 aaPredicted RBP10.83□□□□□ -0.68
CCNDBP1-202ENST00000444658 CDKL5O76039 1030 aa10.83□□□□□ -0.68
CCNDBP1-202ENST00000444658 POLR3DP05423 398 aaPredicted RBP10.83□□□□□ -0.68
CCNDBP1-202ENST00000444658 USP17L8P0C7I0 530 aa10.83□□□□□ -0.68
CCNDBP1-202ENST00000444658 CALM1P0DP23 149 aa10.83□□□□□ -0.68
CCNDBP1-202ENST00000444658 CALM2P0DP24 149 aa10.83□□□□□ -0.68
CCNDBP1-202ENST00000444658 CALM3P0DP25 149 aa10.83□□□□□ -0.68
CCNDBP1-202ENST00000444658 LARP1BQ659C4 914 aaKnown RBP10.83□□□□□ -0.68
CCNDBP1-202ENST00000444658 CDC42EP5Q6NZY7 148 aa10.83□□□□□ -0.68
CCNDBP1-202ENST00000444658 APOA5Q6Q788 366 aa10.83□□□□□ -0.68
CCNDBP1-202ENST00000444658 C16orf86Q6ZW13 317 aa10.83□□□□□ -0.68
CCNDBP1-202ENST00000444658 NSUN7Q8NE18 718 aaKnown RBP10.83□□□□□ -0.68
CCNDBP1-202ENST00000444658 UBAC1Q9BSL1 405 aa10.83□□□□□ -0.68
CCNDBP1-202ENST00000444658 TAOK3Q9H2K8 898 aa10.83□□□□□ -0.68
CCNDBP1-202ENST00000444658 INCENPQ9NQS7 918 aa10.83□□□□□ -0.68
CCNDBP1-202ENST00000444658 HDAC9Q9UKV0 1011 aa10.83□□□□□ -0.68
CCNDBP1-202ENST00000444658 SLC12A7Q9Y666 1083 aa10.83□□□□□ -0.68
CCNDBP1-202ENST00000444658 MYO5AQ9Y4I1 1855 aaKnown RBP10.83□□□□□ -0.68
CCNDBP1-202ENST00000444658 TIAM2Q8IVF5 1701 aa10.82□□□□□ -0.68
CCNDBP1-202ENST00000444658 MAST2Q6P0Q8 1798 aa10.82□□□□□ -0.68
CCNDBP1-202ENST00000444658 DLEC1Q9Y238 1755 aa10.82□□□□□ -0.68
CCNDBP1-202ENST00000444658 CCDC69A6NI79 296 aa10.82□□□□□ -0.68
CCNDBP1-202ENST00000444658 ZBTB43O43298 467 aa10.82□□□□□ -0.68
CCNDBP1-202ENST00000444658 ZSCAN22P10073 491 aaPredicted RBP10.82□□□□□ -0.68
CCNDBP1-202ENST00000444658 NOVP48745 357 aa10.82□□□□□ -0.68
CCNDBP1-202ENST00000444658 WTAPQ15007 396 aa10.82□□□□□ -0.68
CCNDBP1-202ENST00000444658 TNIP1Q15025 636 aa10.82□□□□□ -0.68
CCNDBP1-202ENST00000444658 FKBP1CQ5VVH2 108 aa10.82□□□□□ -0.68
CCNDBP1-202ENST00000444658 CPLX2Q6PUV4 134 aaKnown RBP10.82□□□□□ -0.68
CCNDBP1-202ENST00000444658 METTL16Q86W50 562 aaKnown RBP10.82□□□□□ -0.68
CCNDBP1-202ENST00000444658 NIM1KQ8IY84 436 aa10.82□□□□□ -0.68
CCNDBP1-202ENST00000444658 ZNF444Q8N0Y2 327 aaPredicted RBP10.82□□□□□ -0.68
CCNDBP1-202ENST00000444658 JDP2Q8WYK2 163 aa10.82□□□□□ -0.68
CCNDBP1-202ENST00000444658 FBXW7Q969H0 707 aa10.82□□□□□ -0.68
CCNDBP1-202ENST00000444658 EHD4Q9H223 541 aa10.82□□□□□ -0.68
CCNDBP1-202ENST00000444658 SWAP70Q9UH65 585 aa10.82□□□□□ -0.68
CCNDBP1-202ENST00000444658 FLT1P17948 1338 aa10.82□□□□□ -0.68
CCNDBP1-202ENST00000444658 RANBP6O60518 1105 aaKnown RBP10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 ENTPD3O75355 529 aa10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 CTDNEP1O95476 244 aa10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 RPS12P25398 132 aaKnown RBP10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 DEKP35659 375 aaKnown RBP10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 PLCD1P51178 756 aa10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 GABPAQ06546 454 aa10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 STK3Q13188 491 aa10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 PPP4R3BQ5MIZ7 849 aa10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 FOXP4Q8IVH2 680 aaPredicted RBP10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 OGFOD1Q8N543 542 aa10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 NKX2-3Q8TAU0 364 aa10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 MKNK2Q9HBH9 465 aa10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 ZNF277Q9NRM2 450 aaPredicted RBP10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 CYP2D7A0A087X1C5 515 aa10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 NFKBIEO00221 500 aa10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 BAG4O95429 457 aaKnown RBP10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 CDK8P49336 464 aa10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 METAP2P50579 478 aaKnown RBP eCLIP10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 PKP1Q13835 747 aa10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 RRP12Q5JTH9 1297 aaKnown RBP10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 NFXL1Q6ZNB6 911 aa10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 KIAA0825Q8IV33 1275 aa10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 MAPKAPK5Q8IW41 473 aa10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 ENAHQ8N8S7 591 aaPredicted RBP10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 FANCBQ8NB91 859 aa10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 NEDD1Q8NHV4 660 aa10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 DPF2Q92785 391 aa10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 MXD3Q9BW11 206 aa10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 OSBPL5Q9H0X9 879 aaPredicted RBP10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 ZSCAN16Q9H4T2 348 aaPredicted RBP10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 GPHNQ9NQX3 736 aaPredicted RBP10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 TOMM22Q9NS69 142 aa10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 MTMR6Q9Y217 621 aa10.81□□□□□ -0.68
CCNDBP1-202ENST00000444658 CCDC88AQ3V6T2 1871 aa10.8□□□□□ -0.68
CCNDBP1-202ENST00000444658 TNKSO95271 1327 aa10.8□□□□□ -0.68
CCNDBP1-202ENST00000444658 PSDA5PKW4 1024 aaPredicted RBP10.8□□□□□ -0.68
CCNDBP1-202ENST00000444658 GOLGA8BA8MQT2 603 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms