RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 FAM43AQ8N2R8 423 aa20.3■□□□□ 0.84
TSPAN9-204ENST00000444315 CFHR5Q9BXR6 569 aa20.3■□□□□ 0.84
TSPAN9-204ENST00000444315 HERC5Q9UII4 1024 aaKnown RBP20.3■□□□□ 0.84
TSPAN9-204ENST00000444315 NAV1Q8NEY1 1877 aa20.29■□□□□ 0.84
TSPAN9-204ENST00000444315 TRIM75PA6NK02 468 aa20.29■□□□□ 0.84
TSPAN9-204ENST00000444315 BTBD19C9JJ37 291 aa20.29■□□□□ 0.84
TSPAN9-204ENST00000444315 SLURP2P0DP57 97 aa20.29■□□□□ 0.84
TSPAN9-204ENST00000444315 PDE6AP16499 860 aa20.29■□□□□ 0.84
TSPAN9-204ENST00000444315 ATP5JP18859 108 aa20.29■□□□□ 0.84
TSPAN9-204ENST00000444315 KIF22Q14807 665 aa20.29■□□□□ 0.84
TSPAN9-204ENST00000444315 ARHGEF6Q15052 776 aa20.29■□□□□ 0.84
TSPAN9-204ENST00000444315 NOM1Q5C9Z4 860 aaKnown RBP20.29■□□□□ 0.84
TSPAN9-204ENST00000444315 CRNKL1Q9BZJ0 848 aaKnown RBP20.29■□□□□ 0.84
TSPAN9-204ENST00000444315 PALD1Q9ULE6 856 aa20.29■□□□□ 0.84
TSPAN9-204ENST00000444315 TRIM17Q9Y577 477 aa20.29■□□□□ 0.84
TSPAN9-204ENST00000444315 MYH7P12883 1935 aa20.29■□□□□ 0.84
TSPAN9-204ENST00000444315 ZNF532Q9HCE3 1301 aa20.28■□□□□ 0.84
TSPAN9-204ENST00000444315 PHF20L1A8MW92 1017 aa20.28■□□□□ 0.84
TSPAN9-204ENST00000444315 TBC1D12O60347 775 aa20.28■□□□□ 0.84
TSPAN9-204ENST00000444315 PTPRAP18433 802 aa20.28■□□□□ 0.84
TSPAN9-204ENST00000444315 SP3Q02447 781 aa20.28■□□□□ 0.84
TSPAN9-204ENST00000444315 PKN2Q16513 984 aaKnown RBP20.28■□□□□ 0.84
TSPAN9-204ENST00000444315 CD99L2Q8TCZ2 262 aa20.28■□□□□ 0.84
TSPAN9-204ENST00000444315 EDC3Q96F86 508 aaKnown RBP20.28■□□□□ 0.84
TSPAN9-204ENST00000444315 DCTPP1Q9H773 170 aa20.28■□□□□ 0.84
TSPAN9-204ENST00000444315 ECHDC1Q9NTX5 307 aa20.28■□□□□ 0.84
TSPAN9-204ENST00000444315 ECM2O94769 699 aaPredicted RBP20.27■□□□□ 0.84
TSPAN9-204ENST00000444315 POLR3DP05423 398 aaPredicted RBP20.27■□□□□ 0.84
TSPAN9-204ENST00000444315 ZSCAN25Q6NSZ9 544 aa20.27■□□□□ 0.84
TSPAN9-204ENST00000444315 FASTKD5Q7L8L6 764 aaKnown RBP20.27■□□□□ 0.84
TSPAN9-204ENST00000444315 DDRGK1Q96HY6 314 aa20.27■□□□□ 0.84
TSPAN9-204ENST00000444315 PDHXO00330 501 aa20.26■□□□□ 0.83
TSPAN9-204ENST00000444315 CXCL11O14625 94 aa20.26■□□□□ 0.83
TSPAN9-204ENST00000444315 HAUS7Q99871 368 aa20.26■□□□□ 0.83
TSPAN9-204ENST00000444315 AS3MTQ9HBK9 375 aa20.26■□□□□ 0.83
TSPAN9-204ENST00000444315 ZCCHC17Q9NP64 241 aaKnown RBP20.26■□□□□ 0.83
TSPAN9-204ENST00000444315 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.26■□□□□ 0.83
TSPAN9-204ENST00000444315 KCNH4Q9UQ05 1017 aa20.26■□□□□ 0.83
TSPAN9-204ENST00000444315 PCDHB15Q9Y5E8 787 aa20.26■□□□□ 0.83
TSPAN9-204ENST00000444315 ANKRD23Q86SG2 305 aa20.25■□□□□ 0.83
TSPAN9-204ENST00000444315 TTC6Q86TZ1 520 aa20.25■□□□□ 0.83
TSPAN9-204ENST00000444315 CCDC84Q86UT8 332 aaPredicted RBP20.25■□□□□ 0.83
TSPAN9-204ENST00000444315 FOXP4Q8IVH2 680 aaPredicted RBP20.25■□□□□ 0.83
TSPAN9-204ENST00000444315 AMOTL1Q8IY63 956 aa20.25■□□□□ 0.83
TSPAN9-204ENST00000444315 PARK7Q99497 189 aaKnown RBP20.25■□□□□ 0.83
TSPAN9-204ENST00000444315 EFCC1Q9HA90 598 aa20.25■□□□□ 0.83
TSPAN9-204ENST00000444315 CAP2P40123 477 aa20.24■□□□□ 0.83
TSPAN9-204ENST00000444315 USP17L5A8MUK1 530 aa20.23■□□□□ 0.83
TSPAN9-204ENST00000444315 ERC2O15083 957 aa20.23■□□□□ 0.83
TSPAN9-204ENST00000444315 GDF11O95390 407 aa20.23■□□□□ 0.83
TSPAN9-204ENST00000444315 MAP3K10Q02779 954 aa20.23■□□□□ 0.83
TSPAN9-204ENST00000444315 TSHZ3Q63HK5 1081 aa20.23■□□□□ 0.83
TSPAN9-204ENST00000444315 FBXO46Q6PJ61 603 aaPredicted RBP20.23■□□□□ 0.83
TSPAN9-204ENST00000444315 SMCR8Q8TEV9 937 aaPredicted RBP20.23■□□□□ 0.83
TSPAN9-204ENST00000444315 TBC1D2Q9BYX2 928 aa20.23■□□□□ 0.83
TSPAN9-204ENST00000444315 A0A0G2JLL6 359 aaPredicted RBP20.22■□□□□ 0.83
TSPAN9-204ENST00000444315 TLR2O60603 784 aa20.22■□□□□ 0.83
TSPAN9-204ENST00000444315 MBD4O95243 580 aa20.22■□□□□ 0.83
TSPAN9-204ENST00000444315 ASNSP08243 561 aa20.22■□□□□ 0.83
TSPAN9-204ENST00000444315 LRRFIP1Q32MZ4 808 aaKnown RBP20.22■□□□□ 0.83
TSPAN9-204ENST00000444315 ANKRD45Q5TZF3 282 aa20.22■□□□□ 0.83
TSPAN9-204ENST00000444315 PRRT2Q7Z6L0 340 aaPredicted RBP20.22■□□□□ 0.83
TSPAN9-204ENST00000444315 ARMT1Q9H993 441 aa20.22■□□□□ 0.83
TSPAN9-204ENST00000444315 MCM9Q9NXL9 1143 aa20.22■□□□□ 0.83
TSPAN9-204ENST00000444315 CPA4Q9UI42 421 aa20.22■□□□□ 0.83
TSPAN9-204ENST00000444315 HPS5Q9UPZ3 1129 aa20.22■□□□□ 0.83
TSPAN9-204ENST00000444315 AFG3L2Q9Y4W6 797 aa20.22■□□□□ 0.83
TSPAN9-204ENST00000444315 SIPA1L1O43166 1804 aa20.22■□□□□ 0.83
TSPAN9-204ENST00000444315 PHIPQ8WWQ0 1821 aa20.21■□□□□ 0.83
TSPAN9-204ENST00000444315 ADD2P35612 726 aa20.21■□□□□ 0.83
TSPAN9-204ENST00000444315 SPP2Q13103 211 aa20.21■□□□□ 0.83
TSPAN9-204ENST00000444315 OTOP1Q7RTM1 612 aa20.21■□□□□ 0.83
TSPAN9-204ENST00000444315 LCORLQ8N3X6 602 aa20.21■□□□□ 0.83
TSPAN9-204ENST00000444315 ZNF280CQ8ND82 737 aa20.21■□□□□ 0.83
TSPAN9-204ENST00000444315 TMOD4Q9NZQ9 345 aa20.21■□□□□ 0.83
TSPAN9-204ENST00000444315 SERPINB13Q9UIV8 391 aa20.21■□□□□ 0.83
TSPAN9-204ENST00000444315 PNMA3Q9UL41 463 aa20.21■□□□□ 0.83
TSPAN9-204ENST00000444315 PTPRFP10586 1907 aa20.21■□□□□ 0.83
TSPAN9-204ENST00000444315 MYH8P13535 1937 aa20.2■□□□□ 0.82
TSPAN9-204ENST00000444315 PABPC4Q13310 644 aaKnown RBP eCLIP20.2■□□□□ 0.82
TSPAN9-204ENST00000444315 SDR42E1Q8WUS8 393 aa20.2■□□□□ 0.82
TSPAN9-204ENST00000444315 FEZ1Q99689 392 aa20.2■□□□□ 0.82
TSPAN9-204ENST00000444315 RIOK1Q9BRS2 568 aaKnown RBP20.2■□□□□ 0.82
TSPAN9-204ENST00000444315 CABP5Q9NP86 173 aa20.2■□□□□ 0.82
TSPAN9-204ENST00000444315 MPHOSPH10O00566 681 aaKnown RBP20.19■□□□□ 0.82
TSPAN9-204ENST00000444315 HMGCS2P54868 508 aa20.19■□□□□ 0.82
TSPAN9-204ENST00000444315 SOX10P56693 466 aa20.19■□□□□ 0.82
TSPAN9-204ENST00000444315 GCC1Q96CN9 775 aa20.19■□□□□ 0.82
TSPAN9-204ENST00000444315 FMNL1O95466 1100 aaPredicted RBP20.18■□□□□ 0.82
TSPAN9-204ENST00000444315 CYP2C8P10632 490 aa20.18■□□□□ 0.82
TSPAN9-204ENST00000444315 AAMPQ13685 434 aa20.18■□□□□ 0.82
TSPAN9-204ENST00000444315 RAB3GAP1Q15042 981 aa20.18■□□□□ 0.82
TSPAN9-204ENST00000444315 CERKLQ49MI3 558 aaPredicted RBP20.18■□□□□ 0.82
TSPAN9-204ENST00000444315 RWDD1Q9H446 243 aaPredicted RBP20.18■□□□□ 0.82
TSPAN9-204ENST00000444315 ZBTB21Q9ULJ3 1066 aa20.18■□□□□ 0.82
TSPAN9-204ENST00000444315 SLC4A4Q9Y6R1 1079 aa20.18■□□□□ 0.82
TSPAN9-204ENST00000444315 TTC41PQ6P2S7 1318 aa20.18■□□□□ 0.82
TSPAN9-204ENST00000444315 TCRBV5S4A2TA0A5A2 114 aa20.17■□□□□ 0.82
TSPAN9-204ENST00000444315 MX1P20591 662 aa20.17■□□□□ 0.82
TSPAN9-204ENST00000444315 OSBPP22059 807 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms