RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 FBXO46Q6PJ61 603 aaPredicted RBP24.81■■□□□ 1.56
UBE2D4-205ENST00000443780 ANKRD23Q86SG2 305 aa24.81■■□□□ 1.56
UBE2D4-205ENST00000443780 CERS3Q8IU89 383 aa24.81■■□□□ 1.56
UBE2D4-205ENST00000443780 CD99L2Q8TCZ2 262 aa24.81■■□□□ 1.56
UBE2D4-205ENST00000443780 HERC5Q9UII4 1024 aaKnown RBP24.81■■□□□ 1.56
UBE2D4-205ENST00000443780 HPS5Q9UPZ3 1129 aa24.81■■□□□ 1.56
UBE2D4-205ENST00000443780 OTOP1Q7RTM1 612 aa24.8■■□□□ 1.56
UBE2D4-205ENST00000443780 DNAJC2Q99543 621 aaKnown RBP24.8■■□□□ 1.56
UBE2D4-205ENST00000443780 AFG3L2Q9Y4W6 797 aa24.8■■□□□ 1.56
UBE2D4-205ENST00000443780 TRIM17Q9Y577 477 aa24.8■■□□□ 1.56
UBE2D4-205ENST00000443780 GOLIM4O00461 696 aa24.79■■□□□ 1.56
UBE2D4-205ENST00000443780 TLR2O60603 784 aa24.79■■□□□ 1.56
UBE2D4-205ENST00000443780 ATP5JP18859 108 aa24.79■■□□□ 1.56
UBE2D4-205ENST00000443780 DCTPP1Q9H773 170 aa24.79■■□□□ 1.56
UBE2D4-205ENST00000443780 SMARCA5O60264 1052 aaPredicted RBP24.78■■□□□ 1.56
UBE2D4-205ENST00000443780 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.78■■□□□ 1.56
UBE2D4-205ENST00000443780 PALD1Q9ULE6 856 aa24.78■■□□□ 1.56
UBE2D4-205ENST00000443780 ZSWIM8A7E2V4 1837 aa24.77■■□□□ 1.56
UBE2D4-205ENST00000443780 A0A0G2JLL6 359 aaPredicted RBP24.77■■□□□ 1.56
UBE2D4-205ENST00000443780 PDHXO00330 501 aa24.77■■□□□ 1.56
UBE2D4-205ENST00000443780 PDE6AP16499 860 aa24.77■■□□□ 1.56
UBE2D4-205ENST00000443780 RRP1BQ14684 758 aaKnown RBP24.77■■□□□ 1.56
UBE2D4-205ENST00000443780 SLC9C2Q5TAH2 1124 aa24.77■■□□□ 1.56
UBE2D4-205ENST00000443780 PRRT2Q7Z6L0 340 aaPredicted RBP24.77■■□□□ 1.56
UBE2D4-205ENST00000443780 METTL16Q86W50 562 aaKnown RBP24.77■■□□□ 1.56
UBE2D4-205ENST00000443780 FOXP4Q8IVH2 680 aaPredicted RBP24.77■■□□□ 1.56
UBE2D4-205ENST00000443780 BOLA2Q9H3K6 86 aa24.77■■□□□ 1.56
UBE2D4-205ENST00000443780 CAP2P40123 477 aa24.76■■□□□ 1.55
UBE2D4-205ENST00000443780 CAP1Q01518 475 aa24.76■■□□□ 1.55
UBE2D4-205ENST00000443780 GPAT2Q6NUI2 795 aa24.76■■□□□ 1.55
UBE2D4-205ENST00000443780 FASTKD5Q7L8L6 764 aaKnown RBP24.76■■□□□ 1.55
UBE2D4-205ENST00000443780 CCDC84Q86UT8 332 aaPredicted RBP24.76■■□□□ 1.55
UBE2D4-205ENST00000443780 EDC3Q96F86 508 aaKnown RBP24.76■■□□□ 1.55
UBE2D4-205ENST00000443780 EFCC1Q9HA90 598 aa24.76■■□□□ 1.55
UBE2D4-205ENST00000443780 PAG1Q9NWQ8 432 aa24.76■■□□□ 1.55
UBE2D4-205ENST00000443780 SAP30BPQ9UHR5 308 aaKnown RBP24.76■■□□□ 1.55
UBE2D4-205ENST00000443780 PCDHB15Q9Y5E8 787 aa24.76■■□□□ 1.55
UBE2D4-205ENST00000443780 NAV1Q8NEY1 1877 aa24.76■■□□□ 1.55
UBE2D4-205ENST00000443780 USP5P45974 858 aa24.75■■□□□ 1.55
UBE2D4-205ENST00000443780 RGS19P49795 217 aa24.75■■□□□ 1.55
UBE2D4-205ENST00000443780 HAUS7Q99871 368 aa24.75■■□□□ 1.55
UBE2D4-205ENST00000443780 RIOK1Q9BRS2 568 aaKnown RBP24.75■■□□□ 1.55
UBE2D4-205ENST00000443780 MAGEB6P1A0A0J9YX57 407 aa24.74■■□□□ 1.55
UBE2D4-205ENST00000443780 TRIM75PA6NK02 468 aa24.74■■□□□ 1.55
UBE2D4-205ENST00000443780 CRACR2BQ8N4Y2 399 aaPredicted RBP24.74■■□□□ 1.55
UBE2D4-205ENST00000443780 DNAJC18Q9H819 358 aa24.74■■□□□ 1.55
UBE2D4-205ENST00000443780 ZNF532Q9HCE3 1301 aa24.74■■□□□ 1.55
UBE2D4-205ENST00000443780 MGAMO43451 1857 aa24.73■■□□□ 1.55
UBE2D4-205ENST00000443780 LOC285556D6RIA3 1793 aa24.73■■□□□ 1.55
UBE2D4-205ENST00000443780 DDX60LQ5H9U9 1706 aaKnown RBP24.73■■□□□ 1.55
UBE2D4-205ENST00000443780 ADGRA2Q96PE1 1338 aa24.73■■□□□ 1.55
UBE2D4-205ENST00000443780 TCRBV5S4A2TA0A5A2 114 aa24.73■■□□□ 1.55
UBE2D4-205ENST00000443780 HLA-DOAP06340 250 aa24.73■■□□□ 1.55
UBE2D4-205ENST00000443780 C17orf99Q6UX52 265 aa24.73■■□□□ 1.55
UBE2D4-205ENST00000443780 GADL1Q6ZQY3 521 aa24.73■■□□□ 1.55
UBE2D4-205ENST00000443780 TRIM34Q9BYJ4 488 aa24.73■■□□□ 1.55
UBE2D4-205ENST00000443780 PTPN22Q9Y2R2 807 aa24.73■■□□□ 1.55
UBE2D4-205ENST00000443780 ARHGEF6Q15052 776 aa24.72■■□□□ 1.55
UBE2D4-205ENST00000443780 SLC4A8Q2Y0W8 1093 aa24.72■■□□□ 1.55
UBE2D4-205ENST00000443780 TBC1D2Q9BYX2 928 aa24.72■■□□□ 1.55
UBE2D4-205ENST00000443780 CPA4Q9UI42 421 aa24.72■■□□□ 1.55
UBE2D4-205ENST00000443780 BAZ2AQ9UIF9 1905 aaKnown RBP24.71■■□□□ 1.55
UBE2D4-205ENST00000443780 USP17L5A8MUK1 530 aa24.71■■□□□ 1.55
UBE2D4-205ENST00000443780 SPP2Q13103 211 aa24.71■■□□□ 1.55
UBE2D4-205ENST00000443780 ZNF280CQ8ND82 737 aa24.71■■□□□ 1.55
UBE2D4-205ENST00000443780 PARK7Q99497 189 aaKnown RBP24.71■■□□□ 1.55
UBE2D4-205ENST00000443780 SOX10P56693 466 aa24.7■■□□□ 1.54
UBE2D4-205ENST00000443780 LACTBP83111 547 aaPredicted RBP24.7■■□□□ 1.54
UBE2D4-205ENST00000443780 CRBNQ96SW2 442 aa24.7■■□□□ 1.54
UBE2D4-205ENST00000443780 CRNKL1Q9BZJ0 848 aaKnown RBP24.7■■□□□ 1.54
UBE2D4-205ENST00000443780 ECHDC1Q9NTX5 307 aa24.7■■□□□ 1.54
UBE2D4-205ENST00000443780 SLC45A1Q9Y2W3 748 aa24.7■■□□□ 1.54
UBE2D4-205ENST00000443780 KIAA0100Q14667 2235 aaKnown RBP24.69■■□□□ 1.54
UBE2D4-205ENST00000443780 MYH8P13535 1937 aa24.69■■□□□ 1.54
UBE2D4-205ENST00000443780 ASNSP08243 561 aa24.69■■□□□ 1.54
UBE2D4-205ENST00000443780 CYP2C8P10632 490 aa24.69■■□□□ 1.54
UBE2D4-205ENST00000443780 ADD2P35612 726 aa24.69■■□□□ 1.54
UBE2D4-205ENST00000443780 JAG1P78504 1218 aa24.69■■□□□ 1.54
UBE2D4-205ENST00000443780 KIF22Q14807 665 aa24.69■■□□□ 1.54
UBE2D4-205ENST00000443780 ARHGAP39Q9C0H5 1083 aa24.69■■□□□ 1.54
UBE2D4-205ENST00000443780 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.69■■□□□ 1.54
UBE2D4-205ENST00000443780 AS3MTQ9HBK9 375 aa24.69■■□□□ 1.54
UBE2D4-205ENST00000443780 TTC6Q86TZ1 520 aa24.68■■□□□ 1.54
UBE2D4-205ENST00000443780 EHD4Q9H223 541 aa24.68■■□□□ 1.54
UBE2D4-205ENST00000443780 GINM1Q9NU53 330 aa24.68■■□□□ 1.54
UBE2D4-205ENST00000443780 SERPINB13Q9UIV8 391 aa24.68■■□□□ 1.54
UBE2D4-205ENST00000443780 AGTPBP1Q9UPW5 1226 aa24.68■■□□□ 1.54
UBE2D4-205ENST00000443780 GDF11O95390 407 aa24.67■■□□□ 1.54
UBE2D4-205ENST00000443780 MLLT1Q03111 559 aaPredicted RBP24.67■■□□□ 1.54
UBE2D4-205ENST00000443780 SLFNL1Q499Z3 407 aa24.67■■□□□ 1.54
UBE2D4-205ENST00000443780 LCORLQ8N3X6 602 aa24.67■■□□□ 1.54
UBE2D4-205ENST00000443780 PROCA1Q8NCQ7 364 aaPredicted RBP24.67■■□□□ 1.54
UBE2D4-205ENST00000443780 WDR18Q9BV38 432 aa24.67■■□□□ 1.54
UBE2D4-205ENST00000443780 DOCK3Q8IZD9 2030 aa24.67■■□□□ 1.54
UBE2D4-205ENST00000443780 HTTP42858 3142 aa24.67■■□□□ 1.54
UBE2D4-205ENST00000443780 BCRP11274 1271 aa24.66■■□□□ 1.54
UBE2D4-205ENST00000443780 SHROOM1Q2M3G4 852 aaPredicted RBP24.66■■□□□ 1.54
UBE2D4-205ENST00000443780 TREML2Q5T2D2 321 aa24.66■■□□□ 1.54
UBE2D4-205ENST00000443780 GPATCH3Q96I76 525 aa24.66■■□□□ 1.54
UBE2D4-205ENST00000443780 ARMT1Q9H993 441 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms