RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 RRP1BQ14684 758 aaKnown RBP19.24■□□□□ 0.67
USP39-205ENST00000442708 MCMDC2Q4G0Z9 681 aa19.24■□□□□ 0.67
USP39-205ENST00000442708 VPS53Q5VIR6 699 aa19.24■□□□□ 0.67
USP39-205ENST00000442708 METTL16Q86W50 562 aaKnown RBP19.24■□□□□ 0.67
USP39-205ENST00000442708 ZKSCAN4Q969J2 545 aaPredicted RBP19.24■□□□□ 0.67
USP39-205ENST00000442708 WRNIP1Q96S55 665 aa19.24■□□□□ 0.67
USP39-205ENST00000442708 MCM9Q9NXL9 1143 aa19.24■□□□□ 0.67
USP39-205ENST00000442708 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.24■□□□□ 0.67
USP39-205ENST00000442708 PI4KBQ9UBF8 816 aa19.24■□□□□ 0.67
USP39-205ENST00000442708 ATAD5Q96QE3 1844 aa19.23■□□□□ 0.67
USP39-205ENST00000442708 TBC1D12O60347 775 aa19.23■□□□□ 0.67
USP39-205ENST00000442708 CHMLP26374 656 aa19.23■□□□□ 0.67
USP39-205ENST00000442708 ZNF157P51786 506 aaPredicted RBP19.23■□□□□ 0.67
USP39-205ENST00000442708 VGLL4Q14135 290 aa19.23■□□□□ 0.67
USP39-205ENST00000442708 CTR9Q6PD62 1173 aa19.23■□□□□ 0.67
USP39-205ENST00000442708 CWC27Q6UX04 472 aaKnown RBP19.23■□□□□ 0.67
USP39-205ENST00000442708 CAPNS2Q96L46 248 aa19.23■□□□□ 0.67
USP39-205ENST00000442708 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.23■□□□□ 0.67
USP39-205ENST00000442708 DIAPH3Q9NSV4 1193 aa19.23■□□□□ 0.67
USP39-205ENST00000442708 LAMB1P07942 1786 aa19.23■□□□□ 0.67
USP39-205ENST00000442708 PCNTO95613 3336 aa19.22■□□□□ 0.67
USP39-205ENST00000442708 PATL2C9JE40 543 aaKnown RBP19.22■□□□□ 0.67
USP39-205ENST00000442708 USP17L12C9JPN9 530 aa19.22■□□□□ 0.67
USP39-205ENST00000442708 USP17L21D6R901 530 aa19.22■□□□□ 0.67
USP39-205ENST00000442708 GNAT2P19087 354 aa19.22■□□□□ 0.67
USP39-205ENST00000442708 MAP3K9P80192 1104 aa19.22■□□□□ 0.67
USP39-205ENST00000442708 GRM1Q13255 1194 aa19.22■□□□□ 0.67
USP39-205ENST00000442708 BMP2KLQ5H9B9 411 aa19.22■□□□□ 0.67
USP39-205ENST00000442708 PAXIP1Q6ZW49 1069 aaPredicted RBP19.22■□□□□ 0.67
USP39-205ENST00000442708 RASAL3Q86YV0 1011 aa19.22■□□□□ 0.67
USP39-205ENST00000442708 ANKRD13AQ8IZ07 590 aa19.22■□□□□ 0.67
USP39-205ENST00000442708 CNKSR2Q8WXI2 1034 aa19.22■□□□□ 0.67
USP39-205ENST00000442708 SNCAIPQ9Y6H5 919 aa19.22■□□□□ 0.67
USP39-205ENST00000442708 DOCK1Q14185 1865 aa19.22■□□□□ 0.67
USP39-205ENST00000442708 HIP1O00291 1037 aa19.21■□□□□ 0.67
USP39-205ENST00000442708 AOC2O75106 756 aa19.21■□□□□ 0.67
USP39-205ENST00000442708 POLR3DP05423 398 aaPredicted RBP19.21■□□□□ 0.67
USP39-205ENST00000442708 HLA-DOAP06340 250 aa19.21■□□□□ 0.67
USP39-205ENST00000442708 SLC10A3P09131 477 aa19.21■□□□□ 0.67
USP39-205ENST00000442708 GJA5P36382 358 aa19.21■□□□□ 0.67
USP39-205ENST00000442708 SHROOM1Q2M3G4 852 aaPredicted RBP19.21■□□□□ 0.67
USP39-205ENST00000442708 FOXP4Q8IVH2 680 aaPredicted RBP19.21■□□□□ 0.67
USP39-205ENST00000442708 IFNL3Q8IZI9 196 aa19.21■□□□□ 0.67
USP39-205ENST00000442708 ZIC5Q96T25 663 aa19.21■□□□□ 0.67
USP39-205ENST00000442708 ELP3Q9H9T3 547 aa19.21■□□□□ 0.67
USP39-205ENST00000442708 HERC5Q9UII4 1024 aaKnown RBP19.21■□□□□ 0.67
USP39-205ENST00000442708 THSD7BQ9C0I4 1608 aa19.21■□□□□ 0.67
USP39-205ENST00000442708 CCDC171Q6TFL3 1326 aa19.21■□□□□ 0.67
USP39-205ENST00000442708 WDR33Q9C0J8 1336 aaKnown RBP19.21■□□□□ 0.67
USP39-205ENST00000442708 APPP05067 770 aa19.2■□□□□ 0.66
USP39-205ENST00000442708 JAG1P78504 1218 aa19.2■□□□□ 0.66
USP39-205ENST00000442708 GABPAQ06546 454 aa19.2■□□□□ 0.66
USP39-205ENST00000442708 C12orf60Q5U649 245 aa19.2■□□□□ 0.66
USP39-205ENST00000442708 GIMAP6Q6P9H5 292 aa19.2■□□□□ 0.66
USP39-205ENST00000442708 TTC6Q86TZ1 520 aa19.2■□□□□ 0.66
USP39-205ENST00000442708 SLC10A4Q96EP9 437 aa19.2■□□□□ 0.66
USP39-205ENST00000442708 DYNLL2Q96FJ2 89 aa19.2■□□□□ 0.66
USP39-205ENST00000442708 EHD4Q9H223 541 aa19.2■□□□□ 0.66
USP39-205ENST00000442708 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.2■□□□□ 0.66
USP39-205ENST00000442708 PHIPQ8WWQ0 1821 aa19.2■□□□□ 0.66
USP39-205ENST00000442708 UNCXA6NJT0 531 aa19.19■□□□□ 0.66
USP39-205ENST00000442708 SBK1Q52WX2 424 aa19.19■□□□□ 0.66
USP39-205ENST00000442708 CRACR2BQ8N4Y2 399 aaPredicted RBP19.19■□□□□ 0.66
USP39-205ENST00000442708 SLC44A5Q8NCS7 719 aa19.19■□□□□ 0.66
USP39-205ENST00000442708 SERPINB13Q9UIV8 391 aa19.19■□□□□ 0.66
USP39-205ENST00000442708 MYH8P13535 1937 aa19.19■□□□□ 0.66
USP39-205ENST00000442708 HSPD1P10809 573 aaKnown RBP19.18■□□□□ 0.66
USP39-205ENST00000442708 SHMT1P34896 483 aa19.18■□□□□ 0.66
USP39-205ENST00000442708 MKRN3Q13064 507 aaKnown RBP19.18■□□□□ 0.66
USP39-205ENST00000442708 NOL9Q5SY16 702 aaKnown RBP19.18■□□□□ 0.66
USP39-205ENST00000442708 CCDC102AQ96A19 550 aa19.18■□□□□ 0.66
USP39-205ENST00000442708 WNK4Q96J92 1243 aa19.18■□□□□ 0.66
USP39-205ENST00000442708 CSADQ9Y600 493 aa19.18■□□□□ 0.66
USP39-205ENST00000442708 TDO2P48775 406 aa19.17■□□□□ 0.66
USP39-205ENST00000442708 SPRYD7Q5W111 196 aa19.17■□□□□ 0.66
USP39-205ENST00000442708 TATDN1Q6P1N9 297 aa19.17■□□□□ 0.66
USP39-205ENST00000442708 TNS4Q8IZW8 715 aa19.17■□□□□ 0.66
USP39-205ENST00000442708 DDRGK1Q96HY6 314 aa19.17■□□□□ 0.66
USP39-205ENST00000442708 ARPP21Q9UBL0 812 aaPredicted RBP19.17■□□□□ 0.66
USP39-205ENST00000442708 CTNND1O60716 968 aaKnown RBP19.16■□□□□ 0.66
USP39-205ENST00000442708 GDF11O95390 407 aa19.16■□□□□ 0.66
USP39-205ENST00000442708 CAP2P40123 477 aa19.16■□□□□ 0.66
USP39-205ENST00000442708 ECE1P42892 770 aa19.16■□□□□ 0.66
USP39-205ENST00000442708 ALX1Q15699 326 aa19.16■□□□□ 0.66
USP39-205ENST00000442708 CCDC84Q86UT8 332 aaPredicted RBP19.16■□□□□ 0.66
USP39-205ENST00000442708 SCYL3Q8IZE3 742 aa19.16■□□□□ 0.66
USP39-205ENST00000442708 OPTNQ96CV9 577 aa19.16■□□□□ 0.66
USP39-205ENST00000442708 SPDYE5A6NIY4 337 aa19.15■□□□□ 0.66
USP39-205ENST00000442708 MINDY4BA8MYZ0 360 aa19.15■□□□□ 0.66
USP39-205ENST00000442708 FGAP02671 866 aa19.15■□□□□ 0.66
USP39-205ENST00000442708 C16orf86Q6ZW13 317 aa19.15■□□□□ 0.66
USP39-205ENST00000442708 STK11IPQ8N1F8 1099 aa19.15■□□□□ 0.66
USP39-205ENST00000442708 OTUD5Q96G74 571 aa19.15■□□□□ 0.66
USP39-205ENST00000442708 TRIM34Q9BYJ4 488 aa19.15■□□□□ 0.66
USP39-205ENST00000442708 NACAP1Q9BZK3 213 aa19.15■□□□□ 0.66
USP39-205ENST00000442708 NAPBQ9H115 298 aa19.15■□□□□ 0.66
USP39-205ENST00000442708 TACC3Q9Y6A5 838 aa19.15■□□□□ 0.66
USP39-205ENST00000442708 SGSM2O43147 1006 aa19.14■□□□□ 0.65
USP39-205ENST00000442708 PTPRAP18433 802 aa19.14■□□□□ 0.65
USP39-205ENST00000442708 CDK8P49336 464 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms