RNA–Protein interactions for RNA: ENST00000442029.5

PTPRN-206, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-206ENST00000442029 PPP4CP60510 307 aa17.62■□□□□ 0.41
PTPRN-206ENST00000442029 PRRT2Q7Z6L0 340 aaPredicted RBP17.62■□□□□ 0.41
PTPRN-206ENST00000442029 NBPF11Q86T75 865 aa17.62■□□□□ 0.41
PTPRN-206ENST00000442029 MAPKAPK5Q8IW41 473 aa17.62■□□□□ 0.41
PTPRN-206ENST00000442029 CLASRPQ8N2M8 674 aaKnown RBP17.62■□□□□ 0.41
PTPRN-206ENST00000442029 RHPN1Q8TCX5 695 aa17.62■□□□□ 0.41
PTPRN-206ENST00000442029 TGFBRAP1Q8WUH2 860 aa17.62■□□□□ 0.41
PTPRN-206ENST00000442029 BCL11AQ9H165 835 aa17.62■□□□□ 0.41
PTPRN-206ENST00000442029 PI4KBQ9UBF8 816 aa17.62■□□□□ 0.41
PTPRN-206ENST00000442029 HERC5Q9UII4 1024 aaKnown RBP17.62■□□□□ 0.41
PTPRN-206ENST00000442029 AFG3L2Q9Y4W6 797 aa17.62■□□□□ 0.41
PTPRN-206ENST00000442029 MYH8P13535 1937 aa17.62■□□□□ 0.41
PTPRN-206ENST00000442029 NAV1Q8NEY1 1877 aa17.61■□□□□ 0.41
PTPRN-206ENST00000442029 TRIM75PA6NK02 468 aa17.61■□□□□ 0.41
PTPRN-206ENST00000442029 GNRH1P01148 92 aa17.61■□□□□ 0.41
PTPRN-206ENST00000442029 CAP1Q01518 475 aa17.61■□□□□ 0.41
PTPRN-206ENST00000442029 MAP3K12Q12852 859 aa17.61■□□□□ 0.41
PTPRN-206ENST00000442029 MOGSQ13724 837 aa17.61■□□□□ 0.41
PTPRN-206ENST00000442029 SLC9C1Q4G0N8 1177 aa17.61■□□□□ 0.41
PTPRN-206ENST00000442029 C17orf99Q6UX52 265 aa17.61■□□□□ 0.41
PTPRN-206ENST00000442029 ADGRA1Q86SQ6 560 aa17.61■□□□□ 0.41
PTPRN-206ENST00000442029 KIF1BPQ96EK5 621 aa17.61■□□□□ 0.41
PTPRN-206ENST00000442029 ZBTB40Q9NUA8 1239 aa17.61■□□□□ 0.41
PTPRN-206ENST00000442029 IFIT2P09913 472 aaKnown RBP17.6■□□□□ 0.41
PTPRN-206ENST00000442029 CERS3Q8IU89 383 aa17.6■□□□□ 0.41
PTPRN-206ENST00000442029 CRACR2BQ8N4Y2 399 aaPredicted RBP17.6■□□□□ 0.41
PTPRN-206ENST00000442029 MAGEB6Q8N7X4 407 aa17.6■□□□□ 0.41
PTPRN-206ENST00000442029 TBC1D2Q9BYX2 928 aa17.6■□□□□ 0.41
PTPRN-206ENST00000442029 ARHGAP39Q9C0H5 1083 aa17.6■□□□□ 0.41
PTPRN-206ENST00000442029 PTCH2Q9Y6C5 1203 aa17.6■□□□□ 0.41
PTPRN-206ENST00000442029 FLT1P17948 1338 aa17.6■□□□□ 0.41
PTPRN-206ENST00000442029 DOCK3Q8IZD9 2030 aa17.6■□□□□ 0.41
PTPRN-206ENST00000442029 FMNL1O95466 1100 aaPredicted RBP17.59■□□□□ 0.41
PTPRN-206ENST00000442029 HLA-DOAP06340 250 aa17.59■□□□□ 0.41
PTPRN-206ENST00000442029 CYP2C8P10632 490 aa17.59■□□□□ 0.41
PTPRN-206ENST00000442029 HOXD10P28358 340 aa17.59■□□□□ 0.41
PTPRN-206ENST00000442029 CAP2P40123 477 aa17.59■□□□□ 0.41
PTPRN-206ENST00000442029 PSMC4P43686 418 aa17.59■□□□□ 0.41
PTPRN-206ENST00000442029 PRMT2P55345 433 aa17.59■□□□□ 0.41
PTPRN-206ENST00000442029 TTF1Q15361 905 aaPredicted RBP17.59■□□□□ 0.41
PTPRN-206ENST00000442029 GPAT2Q6NUI2 795 aa17.59■□□□□ 0.41
PTPRN-206ENST00000442029 CCDC84Q86UT8 332 aaPredicted RBP17.59■□□□□ 0.41
PTPRN-206ENST00000442029 SMCR8Q8TEV9 937 aaPredicted RBP17.59■□□□□ 0.41
PTPRN-206ENST00000442029 ARMC5Q96C12 935 aa17.59■□□□□ 0.41
PTPRN-206ENST00000442029 TMEM106CQ9BVX2 250 aa17.59■□□□□ 0.41
PTPRN-206ENST00000442029 AS3MTQ9HBK9 375 aa17.59■□□□□ 0.41
PTPRN-206ENST00000442029 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.59■□□□□ 0.41
PTPRN-206ENST00000442029 NDUFB9Q9Y6M9 179 aa17.59■□□□□ 0.41
PTPRN-206ENST00000442029 RAB11FIP3O75154 756 aa17.58■□□□□ 0.4
PTPRN-206ENST00000442029 USP5P45974 858 aa17.58■□□□□ 0.4
PTPRN-206ENST00000442029 DYNLL1P63167 89 aaKnown RBP17.58■□□□□ 0.4
PTPRN-206ENST00000442029 TMED8Q6PL24 325 aaPredicted RBP17.58■□□□□ 0.4
PTPRN-206ENST00000442029 MIGA1Q8NAN2 632 aa17.58■□□□□ 0.4
PTPRN-206ENST00000442029 PNMA3Q9UL41 463 aa17.58■□□□□ 0.4
PTPRN-206ENST00000442029 SLC45A1Q9Y2W3 748 aa17.58■□□□□ 0.4
PTPRN-206ENST00000442029 ADGRA2Q96PE1 1338 aa17.57■□□□□ 0.4
PTPRN-206ENST00000442029 USP17L5A8MUK1 530 aa17.57■□□□□ 0.4
PTPRN-206ENST00000442029 SPP2Q13103 211 aa17.57■□□□□ 0.4
PTPRN-206ENST00000442029 PDE3AQ14432 1141 aa17.57■□□□□ 0.4
PTPRN-206ENST00000442029 FOXP4Q8IVH2 680 aaPredicted RBP17.57■□□□□ 0.4
PTPRN-206ENST00000442029 ZNF280CQ8ND82 737 aa17.57■□□□□ 0.4
PTPRN-206ENST00000442029 ANTXR1Q9H6X2 564 aa17.57■□□□□ 0.4
PTPRN-206ENST00000442029 SAP30BPQ9UHR5 308 aaKnown RBP17.57■□□□□ 0.4
PTPRN-206ENST00000442029 PALD1Q9ULE6 856 aa17.57■□□□□ 0.4
PTPRN-206ENST00000442029 FCGRTP55899 365 aa17.56■□□□□ 0.4
PTPRN-206ENST00000442029 PROCA1Q8NCQ7 364 aaPredicted RBP17.56■□□□□ 0.4
PTPRN-206ENST00000442029 RAET1EQ8TD07 263 aa17.56■□□□□ 0.4
PTPRN-206ENST00000442029 DNAJC2Q99543 621 aaKnown RBP17.56■□□□□ 0.4
PTPRN-206ENST00000442029 AGTPBP1Q9UPW5 1226 aa17.56■□□□□ 0.4
PTPRN-206ENST00000442029 TNRC18O15417 2968 aaPredicted RBP17.56■□□□□ 0.4
PTPRN-206ENST00000442029 MYPNQ86TC9 1320 aa17.55■□□□□ 0.4
PTPRN-206ENST00000442029 POTEFA5A3E0 1075 aa17.55■□□□□ 0.4
PTPRN-206ENST00000442029 ASNSP08243 561 aa17.55■□□□□ 0.4
PTPRN-206ENST00000442029 BCRP11274 1271 aa17.55■□□□□ 0.4
PTPRN-206ENST00000442029 PABPC4Q13310 644 aaKnown RBP eCLIP17.55■□□□□ 0.4
PTPRN-206ENST00000442029 SLC4A8Q2Y0W8 1093 aa17.55■□□□□ 0.4
PTPRN-206ENST00000442029 SIRT2Q8IXJ6 389 aa17.55■□□□□ 0.4
PTPRN-206ENST00000442029 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.55■□□□□ 0.4
PTPRN-206ENST00000442029 ZNF333Q96JL9 665 aa17.55■□□□□ 0.4
PTPRN-206ENST00000442029 TRIM47Q96LD4 638 aa17.55■□□□□ 0.4
PTPRN-206ENST00000442029 SRRDQ9UH36 339 aa17.55■□□□□ 0.4
PTPRN-206ENST00000442029 CENPFP49454 3210 aa17.55■□□□□ 0.4
PTPRN-206ENST00000442029 BAZ2AQ9UIF9 1905 aaKnown RBP17.55■□□□□ 0.4
PTPRN-206ENST00000442029 HTTP42858 3142 aa17.54■□□□□ 0.4
PTPRN-206ENST00000442029 OSBPP22059 807 aa17.54■□□□□ 0.4
PTPRN-206ENST00000442029 HMGCS2P54868 508 aa17.54■□□□□ 0.4
PTPRN-206ENST00000442029 SH3TC2Q8TF17 1288 aa17.54■□□□□ 0.4
PTPRN-206ENST00000442029 MAGEB6P1A0A0J9YX57 407 aa17.53■□□□□ 0.4
PTPRN-206ENST00000442029 GOLIM4O00461 696 aa17.53■□□□□ 0.4
PTPRN-206ENST00000442029 GDF11O95390 407 aa17.53■□□□□ 0.4
PTPRN-206ENST00000442029 MYCP01106 439 aaPredicted RBP17.53■□□□□ 0.4
PTPRN-206ENST00000442029 CTGFP29279 349 aa17.53■□□□□ 0.4
PTPRN-206ENST00000442029 RRP1BQ14684 758 aaKnown RBP17.53■□□□□ 0.4
PTPRN-206ENST00000442029 TREML2Q5T2D2 321 aa17.53■□□□□ 0.4
PTPRN-206ENST00000442029 C20orf194Q5TEA3 1177 aa17.53■□□□□ 0.4
PTPRN-206ENST00000442029 GINM1Q9NU53 330 aa17.53■□□□□ 0.4
PTPRN-206ENST00000442029 TMOD4Q9NZQ9 345 aa17.53■□□□□ 0.4
PTPRN-206ENST00000442029 DDX60LQ5H9U9 1706 aaKnown RBP17.52■□□□□ 0.4
PTPRN-206ENST00000442029 SLC9C2Q5TAH2 1124 aa17.52■□□□□ 0.4
PTPRN-206ENST00000442029 TTC6Q86TZ1 520 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms