RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 DHX36Q9H2U1 1008 aaKnown RBP22.1■■□□□ 1.13
SMPD4-210ENST00000441135 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.1■■□□□ 1.13
SMPD4-210ENST00000441135 HERC5Q9UII4 1024 aaKnown RBP22.1■■□□□ 1.13
SMPD4-210ENST00000441135 ZHX2Q9Y6X8 837 aa22.1■■□□□ 1.13
SMPD4-210ENST00000441135 SOX10P56693 466 aa22.09■■□□□ 1.13
SMPD4-210ENST00000441135 ANTXR1Q9H6X2 564 aa22.09■■□□□ 1.13
SMPD4-210ENST00000441135 TTC41PQ6P2S7 1318 aa22.08■■□□□ 1.13
SMPD4-210ENST00000441135 PDHXO00330 501 aa22.08■■□□□ 1.13
SMPD4-210ENST00000441135 CYP7A1P22680 504 aa22.08■■□□□ 1.13
SMPD4-210ENST00000441135 MOGSQ13724 837 aa22.08■■□□□ 1.13
SMPD4-210ENST00000441135 FASTKD5Q7L8L6 764 aaKnown RBP22.08■■□□□ 1.13
SMPD4-210ENST00000441135 SMC5Q8IY18 1101 aa22.08■■□□□ 1.13
SMPD4-210ENST00000441135 PI4KBQ9UBF8 816 aa22.08■■□□□ 1.13
SMPD4-210ENST00000441135 FLT1P17948 1338 aa22.07■■□□□ 1.12
SMPD4-210ENST00000441135 DOCK1Q14185 1865 aa22.07■■□□□ 1.12
SMPD4-210ENST00000441135 A0A0G2JLL6 359 aaPredicted RBP22.07■■□□□ 1.12
SMPD4-210ENST00000441135 PRRT2Q7Z6L0 340 aaPredicted RBP22.07■■□□□ 1.12
SMPD4-210ENST00000441135 PARK7Q99497 189 aaKnown RBP22.07■■□□□ 1.12
SMPD4-210ENST00000441135 BOLA2Q9H3K6 86 aa22.07■■□□□ 1.12
SMPD4-210ENST00000441135 PAG1Q9NWQ8 432 aa22.07■■□□□ 1.12
SMPD4-210ENST00000441135 ZBTB47Q9UFB7 747 aaPredicted RBP22.07■■□□□ 1.12
SMPD4-210ENST00000441135 PTPN22Q9Y2R2 807 aa22.07■■□□□ 1.12
SMPD4-210ENST00000441135 AFG3L2Q9Y4W6 797 aa22.07■■□□□ 1.12
SMPD4-210ENST00000441135 NDUFB9Q9Y6M9 179 aa22.07■■□□□ 1.12
SMPD4-210ENST00000441135 GOLIM4O00461 696 aa22.06■■□□□ 1.12
SMPD4-210ENST00000441135 SLURP2P0DP57 97 aa22.06■■□□□ 1.12
SMPD4-210ENST00000441135 KIF22Q14807 665 aa22.06■■□□□ 1.12
SMPD4-210ENST00000441135 MAGEB6Q8N7X4 407 aa22.06■■□□□ 1.12
SMPD4-210ENST00000441135 TGFBRAP1Q8WUH2 860 aa22.06■■□□□ 1.12
SMPD4-210ENST00000441135 DNAJC2Q99543 621 aaKnown RBP22.06■■□□□ 1.12
SMPD4-210ENST00000441135 FAM196BA6NMK8 535 aa22.05■■□□□ 1.12
SMPD4-210ENST00000441135 LACTBP83111 547 aaPredicted RBP22.05■■□□□ 1.12
SMPD4-210ENST00000441135 MAPKAPK5Q8IW41 473 aa22.05■■□□□ 1.12
SMPD4-210ENST00000441135 TBC1D2Q9BYX2 928 aa22.05■■□□□ 1.12
SMPD4-210ENST00000441135 ADGRA2Q96PE1 1338 aa22.05■■□□□ 1.12
SMPD4-210ENST00000441135 SALL3Q9BXA9 1300 aa22.05■■□□□ 1.12
SMPD4-210ENST00000441135 ERC2O15083 957 aa22.04■■□□□ 1.12
SMPD4-210ENST00000441135 ANKRD45Q5TZF3 282 aa22.04■■□□□ 1.12
SMPD4-210ENST00000441135 GPAT2Q6NUI2 795 aa22.04■■□□□ 1.12
SMPD4-210ENST00000441135 C17orf99Q6UX52 265 aa22.04■■□□□ 1.12
SMPD4-210ENST00000441135 SLC45A1Q9Y2W3 748 aa22.04■■□□□ 1.12
SMPD4-210ENST00000441135 FOCADQ5VW36 1801 aa22.03■■□□□ 1.12
SMPD4-210ENST00000441135 TRIM75PA6NK02 468 aa22.03■■□□□ 1.12
SMPD4-210ENST00000441135 GNRH1P01148 92 aa22.03■■□□□ 1.12
SMPD4-210ENST00000441135 PDE6AP16499 860 aa22.03■■□□□ 1.12
SMPD4-210ENST00000441135 CAP2P40123 477 aa22.03■■□□□ 1.12
SMPD4-210ENST00000441135 CAP1Q01518 475 aa22.03■■□□□ 1.12
SMPD4-210ENST00000441135 MIGA1Q8NAN2 632 aa22.03■■□□□ 1.12
SMPD4-210ENST00000441135 TRIM34Q9BYJ4 488 aa22.03■■□□□ 1.12
SMPD4-210ENST00000441135 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.03■■□□□ 1.124e-6■□□□□ 10
SMPD4-210ENST00000441135 BCL11AQ9H165 835 aa22.03■■□□□ 1.12
SMPD4-210ENST00000441135 GLRX3O76003 335 aaKnown RBP22.02■■□□□ 1.12
SMPD4-210ENST00000441135 HLA-DOAP06340 250 aa22.02■■□□□ 1.12
SMPD4-210ENST00000441135 MX1P20591 662 aa22.02■■□□□ 1.12
SMPD4-210ENST00000441135 DYNLL1P63167 89 aaKnown RBP22.02■■□□□ 1.12
SMPD4-210ENST00000441135 SLC9C2Q5TAH2 1124 aa22.02■■□□□ 1.12
SMPD4-210ENST00000441135 GADL1Q6ZQY3 521 aa22.02■■□□□ 1.12
SMPD4-210ENST00000441135 METTL16Q86W50 562 aaKnown RBP22.02■■□□□ 1.12
SMPD4-210ENST00000441135 FOXP4Q8IVH2 680 aaPredicted RBP22.02■■□□□ 1.12
SMPD4-210ENST00000441135 CRACR2BQ8N4Y2 399 aaPredicted RBP22.02■■□□□ 1.12
SMPD4-210ENST00000441135 CPA4Q9UI42 421 aa22.02■■□□□ 1.12
SMPD4-210ENST00000441135 HTTP42858 3142 aa22.02■■□□□ 1.11
SMPD4-210ENST00000441135 IGHDP01880 384 aa22.01■■□□□ 1.11
SMPD4-210ENST00000441135 ARMC5Q96C12 935 aa22.01■■□□□ 1.11
SMPD4-210ENST00000441135 EDC3Q96F86 508 aaKnown RBP22.01■■□□□ 1.11
SMPD4-210ENST00000441135 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.01■■□□□ 1.11
SMPD4-210ENST00000441135 STAP2Q9UGK3 403 aa22.01■■□□□ 1.11
SMPD4-210ENST00000441135 PALD1Q9ULE6 856 aa22.01■■□□□ 1.11
SMPD4-210ENST00000441135 MYH7P12883 1935 aa22.01■■□□□ 1.11
SMPD4-210ENST00000441135 CDK5RAP2Q96SN8 1893 aa22■■□□□ 1.11
SMPD4-210ENST00000441135 TCRBV5S4A2TA0A5A2 114 aa22■■□□□ 1.11
SMPD4-210ENST00000441135 ADD2P35612 726 aa22■■□□□ 1.11
SMPD4-210ENST00000441135 USP5P45974 858 aa22■■□□□ 1.11
SMPD4-210ENST00000441135 PRMT2P55345 433 aa22■■□□□ 1.11
SMPD4-210ENST00000441135 UBE3CQ15386 1083 aa22■■□□□ 1.11
SMPD4-210ENST00000441135 ZSCAN25Q6NSZ9 544 aa22■■□□□ 1.11
SMPD4-210ENST00000441135 CCDC84Q86UT8 332 aaPredicted RBP22■■□□□ 1.11
SMPD4-210ENST00000441135 ZNF280CQ8ND82 737 aa22■■□□□ 1.11
SMPD4-210ENST00000441135 PI4K2BQ8TCG2 481 aa22■■□□□ 1.11
SMPD4-210ENST00000441135 GINM1Q9NU53 330 aa22■■□□□ 1.11
SMPD4-210ENST00000441135 USP17L5A8MUK1 530 aa21.99■■□□□ 1.11
SMPD4-210ENST00000441135 ASNSP08243 561 aa21.99■■□□□ 1.11
SMPD4-210ENST00000441135 CYP2C8P10632 490 aa21.99■■□□□ 1.11
SMPD4-210ENST00000441135 RRP1BQ14684 758 aaKnown RBP21.99■■□□□ 1.11
SMPD4-210ENST00000441135 KBTBD3Q8NAB2 608 aa21.99■■□□□ 1.11
SMPD4-210ENST00000441135 PROCA1Q8NCQ7 364 aaPredicted RBP21.99■■□□□ 1.11
SMPD4-210ENST00000441135 RIOK1Q9BRS2 568 aaKnown RBP21.99■■□□□ 1.11
SMPD4-210ENST00000441135 ARHGAP39Q9C0H5 1083 aa21.99■■□□□ 1.11
SMPD4-210ENST00000441135 AS3MTQ9HBK9 375 aa21.99■■□□□ 1.11
SMPD4-210ENST00000441135 SAP30BPQ9UHR5 308 aaKnown RBP21.99■■□□□ 1.11
SMPD4-210ENST00000441135 AGTPBP1Q9UPW5 1226 aa21.99■■□□□ 1.11
SMPD4-210ENST00000441135 ZNF532Q9HCE3 1301 aa21.99■■□□□ 1.11
SMPD4-210ENST00000441135 NUCB1Q02818 461 aa21.98■■□□□ 1.11
SMPD4-210ENST00000441135 SPP2Q13103 211 aa21.98■■□□□ 1.11
SMPD4-210ENST00000441135 OTUD7AQ8TE49 926 aaPredicted RBP21.98■■□□□ 1.11
SMPD4-210ENST00000441135 DNAJC18Q9H819 358 aa21.98■■□□□ 1.11
SMPD4-210ENST00000441135 PTCH2Q9Y6C5 1203 aa21.98■■□□□ 1.11
SMPD4-210ENST00000441135 SIPA1L1O43166 1804 aa21.98■■□□□ 1.11
SMPD4-210ENST00000441135 PHIPQ8WWQ0 1821 aa21.98■■□□□ 1.11
SMPD4-210ENST00000441135 MAGEB6P1A0A0J9YX57 407 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms