RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 PLCD1P51178 756 aa17.56■□□□□ 0.4
CPSF7-205ENST00000439958 LLPHQ9BRT6 129 aaKnown RBP17.56■□□□□ 0.4
CPSF7-205ENST00000439958 KLRG2A4D1S0 409 aaPredicted RBP17.56■□□□□ 0.4
CPSF7-205ENST00000439958 TSPY3P0CV98 308 aa17.56■□□□□ 0.4
CPSF7-205ENST00000439958 TSPY8P0CW00 308 aa17.56■□□□□ 0.4
CPSF7-205ENST00000439958 IL1R1P14778 569 aa17.56■□□□□ 0.4
CPSF7-205ENST00000439958 SLF2Q8IX21 1173 aa17.56■□□□□ 0.4
CPSF7-205ENST00000439958 ZNF654Q8IZM8 581 aa17.56■□□□□ 0.4
CPSF7-205ENST00000439958 ZSCAN10Q96SZ4 725 aaPredicted RBP17.56■□□□□ 0.4
CPSF7-205ENST00000439958 AGXT2Q9BYV1 514 aa17.56■□□□□ 0.4
CPSF7-205ENST00000439958 ARPP21Q9UBL0 812 aaPredicted RBP17.56■□□□□ 0.4
CPSF7-205ENST00000439958 CATIPQ7Z7H3 387 aa17.55■□□□□ 0.4
CPSF7-205ENST00000439958 RNF214Q8ND24 703 aa17.55■□□□□ 0.4
CPSF7-205ENST00000439958 ECE2O60344 883 aa17.55■□□□□ 0.4
CPSF7-205ENST00000439958 RAD17O75943 681 aa17.55■□□□□ 0.4
CPSF7-205ENST00000439958 CDKL5O76039 1030 aa17.55■□□□□ 0.4
CPSF7-205ENST00000439958 EIF6P56537 245 aaKnown RBP17.55■□□□□ 0.4
CPSF7-205ENST00000439958 SF3A1Q15459 793 aaKnown RBP17.55■□□□□ 0.4
CPSF7-205ENST00000439958 TRIM22Q8IYM9 498 aa17.55■□□□□ 0.4
CPSF7-205ENST00000439958 ZNF277Q9NRM2 450 aaPredicted RBP17.55■□□□□ 0.4
CPSF7-205ENST00000439958 USP17L3A6NCW0 530 aa17.55■□□□□ 0.4
CPSF7-205ENST00000439958 USP17L4A6NCW7 530 aa17.55■□□□□ 0.4
CPSF7-205ENST00000439958 DPEP1P16444 411 aa17.55■□□□□ 0.4
CPSF7-205ENST00000439958 USP17L1Q7RTZ2 530 aa17.55■□□□□ 0.4
CPSF7-205ENST00000439958 CERS5Q8N5B7 392 aa17.55■□□□□ 0.4
CPSF7-205ENST00000439958 ENAHQ8N8S7 591 aaPredicted RBP17.55■□□□□ 0.4
CPSF7-205ENST00000439958 USP40Q9NVE5 1235 aa17.55■□□□□ 0.4
CPSF7-205ENST00000439958 PCDHAC2Q9Y5I4 1007 aa17.55■□□□□ 0.4
CPSF7-205ENST00000439958 BAZ2AQ9UIF9 1905 aaKnown RBP17.55■□□□□ 0.4
CPSF7-205ENST00000439958 FDPSP14324 419 aaKnown RBP17.54■□□□□ 0.4
CPSF7-205ENST00000439958 SSRP1Q08945 709 aaKnown RBP17.54■□□□□ 0.4
CPSF7-205ENST00000439958 DAGLAQ9Y4D2 1042 aa17.54■□□□□ 0.4
CPSF7-205ENST00000439958 ZMYM6O95789 1325 aa17.54■□□□□ 0.4
CPSF7-205ENST00000439958 IRS2Q9Y4H2 1338 aa17.54■□□□□ 0.4
CPSF7-205ENST00000439958 LARGE2Q8N3Y3 721 aa17.54■□□□□ 0.4
CPSF7-205ENST00000439958 TTLL6Q8N841 843 aa17.54■□□□□ 0.4
CPSF7-205ENST00000439958 RTFDC1Q9BY42 306 aaPredicted RBP17.54■□□□□ 0.4
CPSF7-205ENST00000439958 TMEM63CQ9P1W3 806 aa17.54■□□□□ 0.4
CPSF7-205ENST00000439958 MBD3O95983 291 aa17.54■□□□□ 0.4
CPSF7-205ENST00000439958 CSPP1Q1MSJ5 1256 aa17.54■□□□□ 0.4
CPSF7-205ENST00000439958 ZSCAN23Q3MJ62 389 aa17.54■□□□□ 0.4
CPSF7-205ENST00000439958 SMARCC2Q8TAQ2 1214 aa17.53■□□□□ 0.4
CPSF7-205ENST00000439958 MPHOSPH10O00566 681 aaKnown RBP17.53■□□□□ 0.4
CPSF7-205ENST00000439958 SLURP2P0DP57 97 aa17.53■□□□□ 0.4
CPSF7-205ENST00000439958 CAMK4Q16566 473 aa17.53■□□□□ 0.4
CPSF7-205ENST00000439958 CLEC17AQ6ZS10 378 aa17.53■□□□□ 0.4
CPSF7-205ENST00000439958 TTC6Q86TZ1 520 aa17.52■□□□□ 0.4
CPSF7-205ENST00000439958 TCHHQ07283 1943 aa17.52■□□□□ 0.4
CPSF7-205ENST00000439958 ME1P48163 572 aa17.52■□□□□ 0.4
CPSF7-205ENST00000439958 KCNJ14Q9UNX9 436 aa17.52■□□□□ 0.4
CPSF7-205ENST00000439958 FANCBQ8NB91 859 aa17.52■□□□□ 0.39
CPSF7-205ENST00000439958 TEKT1Q969V4 418 aa17.52■□□□□ 0.39
CPSF7-205ENST00000439958 FAM196BA6NMK8 535 aa17.51■□□□□ 0.39
CPSF7-205ENST00000439958 POLD1P28340 1107 aa17.51■□□□□ 0.39
CPSF7-205ENST00000439958 CTCFLQ8NI51 663 aaPredicted RBP17.51■□□□□ 0.39
CPSF7-205ENST00000439958 KAT14Q9H8E8 782 aa17.51■□□□□ 0.39
CPSF7-205ENST00000439958 CASZ1Q86V15 1759 aa17.51■□□□□ 0.39
CPSF7-205ENST00000439958 ARAP2Q8WZ64 1704 aa17.51■□□□□ 0.39
CPSF7-205ENST00000439958 PDS5AQ29RF7 1337 aaKnown RBP17.51■□□□□ 0.39
CPSF7-205ENST00000439958 PLCG2P16885 1265 aa17.51■□□□□ 0.39
CPSF7-205ENST00000439958 LIFRP42702 1097 aa17.51■□□□□ 0.39
CPSF7-205ENST00000439958 STYK1Q6J9G0 422 aa17.51■□□□□ 0.39
CPSF7-205ENST00000439958 GAS2L3Q86XJ1 694 aa17.51■□□□□ 0.39
CPSF7-205ENST00000439958 SYAP1Q96A49 352 aaPredicted RBP17.51■□□□□ 0.39
CPSF7-205ENST00000439958 GUCY1A2P33402 732 aa17.51■□□□□ 0.39
CPSF7-205ENST00000439958 TMTC2Q8N394 836 aa17.51■□□□□ 0.39
CPSF7-205ENST00000439958 PANK2Q9BZ23 570 aa17.51■□□□□ 0.39
CPSF7-205ENST00000439958 PLCB2Q00722 1185 aa17.5■□□□□ 0.39
CPSF7-205ENST00000439958 C12orf60Q5U649 245 aa17.5■□□□□ 0.39
CPSF7-205ENST00000439958 FLT1P17948 1338 aa17.5■□□□□ 0.39
CPSF7-205ENST00000439958 SALL1Q9NSC2 1324 aa17.5■□□□□ 0.39
CPSF7-205ENST00000439958 TRIM34Q9BYJ4 488 aa17.5■□□□□ 0.39
CPSF7-205ENST00000439958 BCS1LQ9Y276 419 aa17.5■□□□□ 0.39
CPSF7-205ENST00000439958 CCDC196A0A1B0GTZ2 297 aa17.5■□□□□ 0.39
CPSF7-205ENST00000439958 UBE2HP62256 183 aa17.5■□□□□ 0.39
CPSF7-205ENST00000439958 C15orf52Q6ZUT6 534 aaKnown RBP17.5■□□□□ 0.39
CPSF7-205ENST00000439958 CRACR2BQ8N4Y2 399 aaPredicted RBP17.5■□□□□ 0.39
CPSF7-205ENST00000439958 V9GY48 417 aaPredicted RBP17.5■□□□□ 0.39
CPSF7-205ENST00000439958 LAMA4Q16363 1823 aa17.49■□□□□ 0.39
CPSF7-205ENST00000439958 PLEKHA8P1O95397 391 aa17.49■□□□□ 0.39
CPSF7-205ENST00000439958 RESTQ13127 1097 aa17.49■□□□□ 0.39
CPSF7-205ENST00000439958 STK38Q15208 465 aa17.49■□□□□ 0.39
CPSF7-205ENST00000439958 GIMAP6Q6P9H5 292 aa17.49■□□□□ 0.39
CPSF7-205ENST00000439958 SGMS1Q86VZ5 419 aa17.49■□□□□ 0.39
CPSF7-205ENST00000439958 CLEC10AQ8IUN9 316 aa17.49■□□□□ 0.39
CPSF7-205ENST00000439958 ZBTB12Q9Y330 459 aaPredicted RBP17.49■□□□□ 0.39
CPSF7-205ENST00000439958 KRT40Q6A162 431 aa17.49■□□□□ 0.39
CPSF7-205ENST00000439958 PODNQ7Z5L7 613 aa17.49■□□□□ 0.39
CPSF7-205ENST00000439958 USP28Q96RU2 1077 aa17.49■□□□□ 0.39
CPSF7-205ENST00000439958 SCAND2PQ9GZW5 306 aaPredicted RBP17.49■□□□□ 0.39
CPSF7-205ENST00000439958 GPR75-ASB3A0A0A6YYF3 556 aa17.48■□□□□ 0.39
CPSF7-205ENST00000439958 GOLGA8HP0CJ92 632 aa17.48■□□□□ 0.39
CPSF7-205ENST00000439958 FBXO18Q8NFZ0 1043 aa17.48■□□□□ 0.39
CPSF7-205ENST00000439958 ZSCAN16Q9H4T2 348 aaPredicted RBP17.48■□□□□ 0.39
CPSF7-205ENST00000439958 VAT1LQ9HCJ6 419 aa17.48■□□□□ 0.39
CPSF7-205ENST00000439958 CFAP45Q9UL16 551 aa17.48■□□□□ 0.39
CPSF7-205ENST00000439958 SCAF8Q9UPN6 1271 aaKnown RBP17.48■□□□□ 0.39
CPSF7-205ENST00000439958 CRKP46108 304 aa17.48■□□□□ 0.39
CPSF7-205ENST00000439958 NFIAQ12857 509 aa17.48■□□□□ 0.39
CPSF7-205ENST00000439958 SAFBQ15424 915 aaKnown RBP eCLIP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms