RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 H3BQF6 201 aa11.34□□□□□ -0.59
CDC42SE1-202ENST00000439374 ENC1O14682 589 aa11.34□□□□□ -0.59
CDC42SE1-202ENST00000439374 NEMFO60524 1076 aa11.34□□□□□ -0.59
CDC42SE1-202ENST00000439374 PDE8BO95263 885 aa11.34□□□□□ -0.59
CDC42SE1-202ENST00000439374 CDC27P30260 824 aa11.34□□□□□ -0.59
CDC42SE1-202ENST00000439374 SSRP1Q08945 709 aaKnown RBP11.34□□□□□ -0.59
CDC42SE1-202ENST00000439374 NAA16Q6N069 864 aaPredicted RBP11.34□□□□□ -0.59
CDC42SE1-202ENST00000439374 SPATA5Q8NB90 893 aa11.34□□□□□ -0.59
CDC42SE1-202ENST00000439374 ADAM21Q9UKJ8 722 aa11.34□□□□□ -0.59
CDC42SE1-202ENST00000439374 PPP2R2CQ9Y2T4 447 aa11.34□□□□□ -0.59
CDC42SE1-202ENST00000439374 MAP3K15Q6ZN16 1313 aa11.34□□□□□ -0.59
CDC42SE1-202ENST00000439374 LOC102724159A0A0B4J2E5 919 aa11.34□□□□□ -0.59
CDC42SE1-202ENST00000439374 PWP2Q15269 919 aaKnown RBP11.34□□□□□ -0.59
CDC42SE1-202ENST00000439374 MICALL1Q8N3F8 863 aa11.34□□□□□ -0.59
CDC42SE1-202ENST00000439374 BAG1Q99933 345 aaPredicted RBP11.34□□□□□ -0.59
CDC42SE1-202ENST00000439374 LLPHQ9BRT6 129 aaKnown RBP11.34□□□□□ -0.59
CDC42SE1-202ENST00000439374 RCOR1Q9UKL0 485 aa11.34□□□□□ -0.59
CDC42SE1-202ENST00000439374 RGPD1P0DJD0 1748 aa11.34□□□□□ -0.59
CDC42SE1-202ENST00000439374 ANTXR2P58335 489 aa11.33□□□□□ -0.6
CDC42SE1-202ENST00000439374 SUSD4Q5VX71 490 aa11.33□□□□□ -0.6
CDC42SE1-202ENST00000439374 CDC5LQ99459 802 aaKnown RBP11.33□□□□□ -0.6
CDC42SE1-202ENST00000439374 CENPHQ9H3R5 247 aa11.33□□□□□ -0.6
CDC42SE1-202ENST00000439374 ZSWIM5Q9P217 1185 aa11.33□□□□□ -0.6
CDC42SE1-202ENST00000439374 RRP15Q9Y3B9 282 aaKnown RBP11.33□□□□□ -0.6
CDC42SE1-202ENST00000439374 NFAT5O94916 1531 aa11.33□□□□□ -0.6
CDC42SE1-202ENST00000439374 BAZ2BQ9UIF8 2168 aaKnown RBP11.33□□□□□ -0.6
CDC42SE1-202ENST00000439374 NR5A1Q13285 461 aa11.33□□□□□ -0.6
CDC42SE1-202ENST00000439374 RASGRF1Q13972 1273 aa11.33□□□□□ -0.6
CDC42SE1-202ENST00000439374 CCDC150Q8NCX0 1101 aa11.33□□□□□ -0.6
CDC42SE1-202ENST00000439374 ZNF274Q96GC6 653 aaPredicted RBP11.33□□□□□ -0.6
CDC42SE1-202ENST00000439374 ISCA1Q9BUE6 129 aa11.33□□□□□ -0.6
CDC42SE1-202ENST00000439374 CABP5Q9NP86 173 aa11.33□□□□□ -0.6
CDC42SE1-202ENST00000439374 ELP1O95163 1332 aa11.33□□□□□ -0.6
CDC42SE1-202ENST00000439374 FMN2Q9NZ56 1722 aa11.33□□□□□ -0.6
CDC42SE1-202ENST00000439374 LTN1O94822 1766 aa11.33□□□□□ -0.6
CDC42SE1-202ENST00000439374 FANCGO15287 622 aa11.33□□□□□ -0.6
CDC42SE1-202ENST00000439374 PDE8AO60658 829 aa11.33□□□□□ -0.6
CDC42SE1-202ENST00000439374 WTAPQ15007 396 aa11.33□□□□□ -0.6
CDC42SE1-202ENST00000439374 DDB1Q16531 1140 aa11.33□□□□□ -0.6
CDC42SE1-202ENST00000439374 LONRF2Q1L5Z9 754 aa11.33□□□□□ -0.6
CDC42SE1-202ENST00000439374 TXLNBQ8N3L3 684 aa11.33□□□□□ -0.6
CDC42SE1-202ENST00000439374 CTAGE5O15320 804 aa11.32□□□□□ -0.6
CDC42SE1-202ENST00000439374 GUCY1A2P33402 732 aa11.32□□□□□ -0.6
CDC42SE1-202ENST00000439374 IFNL3Q8IZI9 196 aa11.32□□□□□ -0.6
CDC42SE1-202ENST00000439374 LCORLQ8N3X6 602 aa11.32□□□□□ -0.6
CDC42SE1-202ENST00000439374 LINC00301Q8NCQ3 95 aa11.32□□□□□ -0.6
CDC42SE1-202ENST00000439374 TEX13AQ9BXU3 409 aaPredicted RBP11.32□□□□□ -0.6
CDC42SE1-202ENST00000439374 NEDD4P46934 1319 aa11.32□□□□□ -0.6
CDC42SE1-202ENST00000439374 KCNQ2O43526 872 aa11.32□□□□□ -0.6
CDC42SE1-202ENST00000439374 ADD2P35612 726 aa11.32□□□□□ -0.6
CDC42SE1-202ENST00000439374 TSGA10IPQ3SY00 556 aa11.32□□□□□ -0.6
CDC42SE1-202ENST00000439374 CC2D1AQ6P1N0 951 aaPredicted RBP11.32□□□□□ -0.6
CDC42SE1-202ENST00000439374 SMARCC2Q8TAQ2 1214 aa11.32□□□□□ -0.6
CDC42SE1-202ENST00000439374 KCNG4Q8TDN1 519 aa11.32□□□□□ -0.6
CDC42SE1-202ENST00000439374 SAMSN1Q9NSI8 373 aaKnown RBP11.32□□□□□ -0.6
CDC42SE1-202ENST00000439374 CWC15Q9P013 229 aaKnown RBP11.32□□□□□ -0.6
CDC42SE1-202ENST00000439374 NFE2L3Q9Y4A8 694 aa11.32□□□□□ -0.6
CDC42SE1-202ENST00000439374 CDKL5O76039 1030 aa11.32□□□□□ -0.6
CDC42SE1-202ENST00000439374 CDC25AP30304 524 aa11.32□□□□□ -0.6
CDC42SE1-202ENST00000439374 LIG3P49916 1009 aa11.32□□□□□ -0.6
CDC42SE1-202ENST00000439374 RTN1Q16799 776 aa11.32□□□□□ -0.6
CDC42SE1-202ENST00000439374 APOA5Q6Q788 366 aa11.32□□□□□ -0.6
CDC42SE1-202ENST00000439374 DIS3L2Q8IYB7 885 aaKnown RBP11.32□□□□□ -0.6
CDC42SE1-202ENST00000439374 CAGE1Q8TC20 777 aa11.32□□□□□ -0.6
CDC42SE1-202ENST00000439374 PLIN2Q99541 437 aa11.32□□□□□ -0.6
CDC42SE1-202ENST00000439374 VPS54Q9P1Q0 977 aa11.32□□□□□ -0.6
CDC42SE1-202ENST00000439374 ATP2C2O75185 946 aa11.31□□□□□ -0.6
CDC42SE1-202ENST00000439374 ZPR1O75312 459 aa11.31□□□□□ -0.6
CDC42SE1-202ENST00000439374 TBC1D8O95759 1140 aa11.31□□□□□ -0.6
CDC42SE1-202ENST00000439374 DYNLL1P63167 89 aaKnown RBP11.31□□□□□ -0.6
CDC42SE1-202ENST00000439374 TTF1Q15361 905 aaPredicted RBP11.31□□□□□ -0.6
CDC42SE1-202ENST00000439374 PUM3Q15397 648 aaKnown RBP11.31□□□□□ -0.6
CDC42SE1-202ENST00000439374 ACRBPQ8NEB7 543 aa11.31□□□□□ -0.6
CDC42SE1-202ENST00000439374 PCMTD1Q96MG8 357 aaPredicted RBP11.31□□□□□ -0.6
CDC42SE1-202ENST00000439374 GUCA1BQ9UMX6 200 aa11.31□□□□□ -0.6
CDC42SE1-202ENST00000439374 RIPOR2Q9Y4F9 1068 aa11.31□□□□□ -0.6
CDC42SE1-202ENST00000439374 XRN1Q8IZH2 1706 aaKnown RBP11.31□□□□□ -0.6
CDC42SE1-202ENST00000439374 TOPAZ1Q8N9V7 1692 aa11.31□□□□□ -0.6
CDC42SE1-202ENST00000439374 CHMP4BP1P59074 171 aa11.31□□□□□ -0.6
CDC42SE1-202ENST00000439374 FAM47AQ5JRC9 791 aa11.31□□□□□ -0.6
CDC42SE1-202ENST00000439374 NCAPH2Q6IBW4 605 aa11.31□□□□□ -0.6
CDC42SE1-202ENST00000439374 ILDR1Q86SU0 546 aaPredicted RBP11.31□□□□□ -0.6
CDC42SE1-202ENST00000439374 JMYQ8N9B5 988 aa11.31□□□□□ -0.6
CDC42SE1-202ENST00000439374 SLC4A9Q96Q91 983 aa11.31□□□□□ -0.6
CDC42SE1-202ENST00000439374 PCDHA5Q9Y5H7 936 aa11.31□□□□□ -0.6
CDC42SE1-202ENST00000439374 POLR2DO15514 142 aaKnown RBP11.3□□□□□ -0.6
CDC42SE1-202ENST00000439374 ECM2O94769 699 aaPredicted RBP11.3□□□□□ -0.6
CDC42SE1-202ENST00000439374 H2AFXP16104 143 aaPredicted RBP11.3□□□□□ -0.6
CDC42SE1-202ENST00000439374 KIF23Q02241 960 aaPredicted RBP11.3□□□□□ -0.6
CDC42SE1-202ENST00000439374 ADALQ6DHV7 355 aa11.3□□□□□ -0.6
CDC42SE1-202ENST00000439374 PPFIBP1Q86W92 1011 aa11.3□□□□□ -0.6
CDC42SE1-202ENST00000439374 FAM208AQ9UK61 1670 aaKnown RBP11.3□□□□□ -0.6
CDC42SE1-202ENST00000439374 GOLGB1Q14789 3259 aaKnown RBP11.3□□□□□ -0.6
CDC42SE1-202ENST00000439374 KIF2AO00139 706 aaPredicted RBP11.3□□□□□ -0.6
CDC42SE1-202ENST00000439374 CIAO1O76071 339 aa11.3□□□□□ -0.6
CDC42SE1-202ENST00000439374 ABL1P00519 1130 aa11.3□□□□□ -0.6
CDC42SE1-202ENST00000439374 PDE4BQ07343 736 aa11.3□□□□□ -0.6
CDC42SE1-202ENST00000439374 EP400NLQ6ZTU2 488 aa11.3□□□□□ -0.6
CDC42SE1-202ENST00000439374 MB21D2Q8IYB1 491 aaPredicted RBP11.3□□□□□ -0.6
CDC42SE1-202ENST00000439374 HPS5Q9UPZ3 1129 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms