RNA–Protein interactions for RNA: ENST00000439009.1

LINC00578-201, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-201ENST00000439009 MECOMQ03112 1051 aa9.8□□□□□ -0.84
LINC00578-201ENST00000439009 SPP2Q13103 211 aa9.8□□□□□ -0.84
LINC00578-201ENST00000439009 PABPC4Q13310 644 aaKnown RBP eCLIP9.8□□□□□ -0.84
LINC00578-201ENST00000439009 DZIP1Q86YF9 867 aaKnown RBP9.8□□□□□ -0.84
LINC00578-201ENST00000439009 SIL1Q9H173 461 aa9.8□□□□□ -0.84
LINC00578-201ENST00000439009 ASCC2Q9H1I8 757 aaPredicted RBP9.8□□□□□ -0.84
LINC00578-201ENST00000439009 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.8□□□□□ -0.84
LINC00578-201ENST00000439009 HMX1Q9NP08 348 aaPredicted RBP9.8□□□□□ -0.84
LINC00578-201ENST00000439009 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.8□□□□□ -0.84
LINC00578-201ENST00000439009 HDAC5Q9UQL6 1122 aa9.8□□□□□ -0.84
LINC00578-201ENST00000439009 STXBP5LQ9Y2K9 1186 aa9.8□□□□□ -0.84
LINC00578-201ENST00000439009 COL2A1P02458 1487 aaPredicted RBP9.79□□□□□ -0.84
LINC00578-201ENST00000439009 CENPBP07199 599 aaPredicted RBP9.79□□□□□ -0.84
LINC00578-201ENST00000439009 COL6A1P12109 1028 aa9.79□□□□□ -0.84
LINC00578-201ENST00000439009 HOXA7P31268 230 aaPredicted RBP9.79□□□□□ -0.84
LINC00578-201ENST00000439009 CAP2P40123 477 aa9.79□□□□□ -0.84
LINC00578-201ENST00000439009 TIMM10P62072 90 aa9.79□□□□□ -0.84
LINC00578-201ENST00000439009 TRIM32Q13049 653 aa9.79□□□□□ -0.84
LINC00578-201ENST00000439009 RRP1BQ14684 758 aaKnown RBP9.79□□□□□ -0.84
LINC00578-201ENST00000439009 CCDC84Q86UT8 332 aaPredicted RBP9.79□□□□□ -0.84
LINC00578-201ENST00000439009 METTL16Q86W50 562 aaKnown RBP9.79□□□□□ -0.84
LINC00578-201ENST00000439009 C7orf61Q8IZ16 206 aa9.79□□□□□ -0.84
LINC00578-201ENST00000439009 DEFB123Q8N688 67 aa9.79□□□□□ -0.84
LINC00578-201ENST00000439009 WDR18Q9BV38 432 aa9.79□□□□□ -0.84
LINC00578-201ENST00000439009 C11orf49Q9H6J7 331 aa9.79□□□□□ -0.84
LINC00578-201ENST00000439009 MTMR10Q9NXD2 777 aa9.79□□□□□ -0.84
LINC00578-201ENST00000439009 PA2G4Q9UQ80 394 aaKnown RBP9.79□□□□□ -0.84
LINC00578-201ENST00000439009 USP17L5A8MUK1 530 aa9.78□□□□□ -0.84
LINC00578-201ENST00000439009 LDHCP07864 332 aa9.78□□□□□ -0.84
LINC00578-201ENST00000439009 MAGEA10P43363 369 aaPredicted RBP9.78□□□□□ -0.84
LINC00578-201ENST00000439009 HMGCS2P54868 508 aa9.78□□□□□ -0.84
LINC00578-201ENST00000439009 SLFN5Q08AF3 891 aa9.78□□□□□ -0.84
LINC00578-201ENST00000439009 PICALMQ13492 652 aa9.78□□□□□ -0.84
LINC00578-201ENST00000439009 ERICH6Q7L0X2 663 aa9.78□□□□□ -0.84
LINC00578-201ENST00000439009 TRMT44Q8IYL2 757 aaKnown RBP9.78□□□□□ -0.84
LINC00578-201ENST00000439009 TRMT2AQ8IZ69 625 aaKnown RBP9.78□□□□□ -0.84
LINC00578-201ENST00000439009 TDHQ8IZJ6 230 aa9.78□□□□□ -0.84
LINC00578-201ENST00000439009 TRIB2Q92519 343 aa9.78□□□□□ -0.84
LINC00578-201ENST00000439009 USP6NLQ92738 828 aa9.78□□□□□ -0.84
LINC00578-201ENST00000439009 NSUN4Q96CB9 384 aaKnown RBP9.78□□□□□ -0.84
LINC00578-201ENST00000439009 ABCF2Q9UG63 623 aa9.78□□□□□ -0.84
LINC00578-201ENST00000439009 HERC5Q9UII4 1024 aaKnown RBP9.78□□□□□ -0.84
LINC00578-201ENST00000439009 TAOK2Q9UL54 1235 aa9.78□□□□□ -0.84
LINC00578-201ENST00000439009 AKAP2Q9Y2D5 859 aa9.78□□□□□ -0.84
LINC00578-201ENST00000439009 MGAMO43451 1857 aa9.77□□□□□ -0.85
LINC00578-201ENST00000439009 A0A1B0GUL7 405 aa9.77□□□□□ -0.85
LINC00578-201ENST00000439009 GSTO1P78417 241 aa9.77□□□□□ -0.85
LINC00578-201ENST00000439009 MTX1Q13505 466 aa9.77□□□□□ -0.85
LINC00578-201ENST00000439009 MVPQ14764 893 aaKnown RBP9.77□□□□□ -0.85
LINC00578-201ENST00000439009 LHX8Q68G74 356 aa9.77□□□□□ -0.85
LINC00578-201ENST00000439009 FAM9BQ8IZU0 186 aa9.77□□□□□ -0.85
LINC00578-201ENST00000439009 XAGE2Q96GT9 111 aa9.77□□□□□ -0.85
LINC00578-201ENST00000439009 GINM1Q9NU53 330 aa9.77□□□□□ -0.85
LINC00578-201ENST00000439009 HMG20BQ9P0W2 317 aa9.77□□□□□ -0.85
LINC00578-201ENST00000439009 ZMYND8Q9ULU4 1186 aaPredicted RBP9.77□□□□□ -0.85
LINC00578-201ENST00000439009 PFASO15067 1338 aa9.77□□□□□ -0.85
LINC00578-201ENST00000439009 FAM196BA6NMK8 535 aa9.76□□□□□ -0.85
LINC00578-201ENST00000439009 C19orf81C9J6K1 198 aa9.76□□□□□ -0.85
LINC00578-201ENST00000439009 CT47B1P0C2W7 299 aaPredicted RBP9.76□□□□□ -0.85
LINC00578-201ENST00000439009 BACE1P56817 501 aa9.76□□□□□ -0.85
LINC00578-201ENST00000439009 MORN1Q5T089 497 aa9.76□□□□□ -0.85
LINC00578-201ENST00000439009 FAM109BQ6ICB4 259 aaPredicted RBP9.76□□□□□ -0.85
LINC00578-201ENST00000439009 Q7L0L9 218 aa9.76□□□□□ -0.85
LINC00578-201ENST00000439009 SPATA5Q8NB90 893 aa9.76□□□□□ -0.85
LINC00578-201ENST00000439009 GPRC5AQ8NFJ5 357 aa9.76□□□□□ -0.85
LINC00578-201ENST00000439009 SOCS4Q8WXH5 440 aa9.76□□□□□ -0.85
LINC00578-201ENST00000439009 P2RX7Q99572 595 aaKnown RBP9.76□□□□□ -0.85
LINC00578-201ENST00000439009 NUDT12Q9BQG2 462 aa9.76□□□□□ -0.85
LINC00578-201ENST00000439009 DHX36Q9H2U1 1008 aaKnown RBP9.76□□□□□ -0.85
LINC00578-201ENST00000439009 AS3MTQ9HBK9 375 aa9.76□□□□□ -0.85
LINC00578-201ENST00000439009 PI4KBQ9UBF8 816 aa9.76□□□□□ -0.85
LINC00578-201ENST00000439009 RBPJLQ9UBG7 517 aa9.76□□□□□ -0.85
LINC00578-201ENST00000439009 PHIPQ8WWQ0 1821 aa9.75□□□□□ -0.85
LINC00578-201ENST00000439009 POTEB2H3BUK9 544 aa9.75□□□□□ -0.85
LINC00578-201ENST00000439009 IGSF3O75054 1194 aa9.75□□□□□ -0.85
LINC00578-201ENST00000439009 ASNSP08243 561 aa9.75□□□□□ -0.85
LINC00578-201ENST00000439009 PRKAR2AP13861 404 aaKnown RBP9.75□□□□□ -0.85
LINC00578-201ENST00000439009 SYN1P17600 705 aa9.75□□□□□ -0.85
LINC00578-201ENST00000439009 ARID4AP29374 1257 aaPredicted RBP9.75□□□□□ -0.85
LINC00578-201ENST00000439009 MAPK4P31152 587 aa9.75□□□□□ -0.85
LINC00578-201ENST00000439009 PPP4CP60510 307 aa9.75□□□□□ -0.85
LINC00578-201ENST00000439009 JAG1P78504 1218 aa9.75□□□□□ -0.85
LINC00578-201ENST00000439009 CACNB2Q08289 660 aaPredicted RBP9.75□□□□□ -0.85
LINC00578-201ENST00000439009 TFCP2Q12800 502 aa9.75□□□□□ -0.85
LINC00578-201ENST00000439009 POTEEQ6S8J3 1075 aa9.75□□□□□ -0.85
LINC00578-201ENST00000439009 FOXP4Q8IVH2 680 aaPredicted RBP9.75□□□□□ -0.85
LINC00578-201ENST00000439009 API5Q9BZZ5 524 aaKnown RBP9.75□□□□□ -0.85
LINC00578-201ENST00000439009 UBE2OQ9C0C9 1292 aaKnown RBP9.75□□□□□ -0.85
LINC00578-201ENST00000439009 TXNRD2Q9NNW7 524 aa9.75□□□□□ -0.85
LINC00578-201ENST00000439009 SMC4Q9NTJ3 1288 aa9.75□□□□□ -0.85
LINC00578-201ENST00000439009 NOB1Q9ULX3 412 aaKnown RBP9.75□□□□□ -0.85
LINC00578-201ENST00000439009 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.75□□□□□ -0.85
LINC00578-201ENST00000439009 PTPRFP10586 1907 aa9.74□□□□□ -0.85
LINC00578-201ENST00000439009 DOCK3Q8IZD9 2030 aa9.74□□□□□ -0.85
LINC00578-201ENST00000439009 CYP2B6P20813 491 aa9.74□□□□□ -0.85
LINC00578-201ENST00000439009 HERVK_113P62684 666 aa9.74□□□□□ -0.85
LINC00578-201ENST00000439009 IRX3P78415 501 aaPredicted RBP9.74□□□□□ -0.85
LINC00578-201ENST00000439009 MTMR2Q13614 643 aa9.74□□□□□ -0.85
LINC00578-201ENST00000439009 Q3C1V9 767 aa9.74□□□□□ -0.85
LINC00578-201ENST00000439009 TBC1D9Q6ZT07 1266 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms