RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 CTAGE8P0CG41 777 aa15.24■□□□□ 0.03
ACTN1-204ENST00000438964 CTAGE6Q86UF2 777 aa15.24■□□□□ 0.03
ACTN1-204ENST00000438964 CTAGE4Q8IX94 777 aa15.24■□□□□ 0.03
ACTN1-204ENST00000438964 IP6K1Q92551 441 aa15.24■□□□□ 0.03
ACTN1-204ENST00000438964 HELLSQ9NRZ9 838 aa15.24■□□□□ 0.03
ACTN1-204ENST00000438964 ERLIN1O75477 346 aa15.23■□□□□ 0.03
ACTN1-204ENST00000438964 CD44P16070 742 aaKnown RBP15.23■□□□□ 0.03
ACTN1-204ENST00000438964 CCT5P48643 541 aa15.23■□□□□ 0.03
ACTN1-204ENST00000438964 ATG9AQ7Z3C6 839 aa15.23■□□□□ 0.03
ACTN1-204ENST00000438964 FCHSD1Q86WN1 690 aa15.23■□□□□ 0.03
ACTN1-204ENST00000438964 MAP3K14Q99558 947 aa15.23■□□□□ 0.03
ACTN1-204ENST00000438964 VPS16Q9H269 839 aa15.23■□□□□ 0.03
ACTN1-204ENST00000438964 UTYO14607 1347 aa15.23■□□□□ 0.03
ACTN1-204ENST00000438964 FAM205CA6NFA0 338 aa15.23■□□□□ 0.03
ACTN1-204ENST00000438964 TRDNQ13061 729 aa15.23■□□□□ 0.03
ACTN1-204ENST00000438964 MB21D2Q8IYB1 491 aaPredicted RBP15.23■□□□□ 0.03
ACTN1-204ENST00000438964 SAMM50Q9Y512 469 aa15.23■□□□□ 0.03
ACTN1-204ENST00000438964 ZNF213O14771 459 aa15.22■□□□□ 0.03
ACTN1-204ENST00000438964 RANBP6O60518 1105 aaKnown RBP15.22■□□□□ 0.03
ACTN1-204ENST00000438964 ZNF790Q6PG37 636 aa15.22■□□□□ 0.03
ACTN1-204ENST00000438964 PSD3Q9NYI0 1048 aa15.22■□□□□ 0.03
ACTN1-204ENST00000438964 PCDHB6Q9Y5E3 794 aa15.22■□□□□ 0.03
ACTN1-204ENST00000438964 TECPR2O15040 1411 aa15.22■□□□□ 0.03
ACTN1-204ENST00000438964 GOLGA6L9A6NEM1 432 aa15.22■□□□□ 0.03
ACTN1-204ENST00000438964 MYBL2P10244 700 aa15.22■□□□□ 0.03
ACTN1-204ENST00000438964 RRP12Q5JTH9 1297 aaKnown RBP15.22■□□□□ 0.03
ACTN1-204ENST00000438964 ZBTB3Q9H5J0 574 aa15.22■□□□□ 0.03
ACTN1-204ENST00000438964 HOOK1Q9UJC3 728 aaKnown RBP15.22■□□□□ 0.03
ACTN1-204ENST00000438964 TMEM2Q9UHN6 1383 aa15.22■□□□□ 0.03
ACTN1-204ENST00000438964 ZNF18P17022 549 aa15.22■□□□□ 0.03
ACTN1-204ENST00000438964 KCNA6P17658 529 aa15.22■□□□□ 0.03
ACTN1-204ENST00000438964 ZAP70P43403 619 aa15.22■□□□□ 0.03
ACTN1-204ENST00000438964 TBC1D10CQ8IV04 446 aa15.22■□□□□ 0.03
ACTN1-204ENST00000438964 NCOA7Q8NI08 942 aa15.22■□□□□ 0.03
ACTN1-204ENST00000438964 KAT2BQ92831 832 aa15.22■□□□□ 0.03
ACTN1-204ENST00000438964 AXIN2Q9Y2T1 843 aa15.22■□□□□ 0.03
ACTN1-204ENST00000438964 NR1I3Q14994 352 aa15.21■□□□□ 0.03
ACTN1-204ENST00000438964 CEP112Q8N8E3 955 aa15.21■□□□□ 0.03
ACTN1-204ENST00000438964 EPSTI1Q96J88 318 aa15.21■□□□□ 0.03
ACTN1-204ENST00000438964 CHP1Q99653 195 aa15.21■□□□□ 0.03
ACTN1-204ENST00000438964 RGPD2P0DJD1 1756 aa15.21■□□□□ 0.03
ACTN1-204ENST00000438964 SYF2O95926 243 aaKnown RBP15.21■□□□□ 0.02
ACTN1-204ENST00000438964 ERVK-24P63145 666 aa15.21■□□□□ 0.02
ACTN1-204ENST00000438964 JMYQ8N9B5 988 aa15.21■□□□□ 0.02
ACTN1-204ENST00000438964 BLZF1Q9H2G9 400 aa15.21■□□□□ 0.02
ACTN1-204ENST00000438964 MYH8P13535 1937 aa15.21■□□□□ 0.02
ACTN1-204ENST00000438964 ZNF185O15231 689 aa15.2■□□□□ 0.02
ACTN1-204ENST00000438964 GGCXP38435 758 aa15.2■□□□□ 0.02
ACTN1-204ENST00000438964 CORO7P57737 925 aa15.2■□□□□ 0.02
ACTN1-204ENST00000438964 TRIM29Q14134 588 aa15.2■□□□□ 0.02
ACTN1-204ENST00000438964 DHX37Q8IY37 1157 aaKnown RBP15.2■□□□□ 0.02
ACTN1-204ENST00000438964 KRI1Q8N9T8 703 aaKnown RBP15.2■□□□□ 0.02
ACTN1-204ENST00000438964 OXER1Q8TDS5 423 aa15.2■□□□□ 0.02
ACTN1-204ENST00000438964 PSMB7Q99436 277 aa15.2■□□□□ 0.02
ACTN1-204ENST00000438964 NUP88Q99567 741 aaPredicted RBP15.2■□□□□ 0.02
ACTN1-204ENST00000438964 GPAA1O43292 621 aa15.2■□□□□ 0.02
ACTN1-204ENST00000438964 GYPCP04921 128 aa15.2■□□□□ 0.02
ACTN1-204ENST00000438964 IARSP41252 1262 aaKnown RBP15.2■□□□□ 0.02
ACTN1-204ENST00000438964 TOB1P50616 345 aaPredicted RBP15.2■□□□□ 0.02
ACTN1-204ENST00000438964 ZC3H6P61129 1189 aaKnown RBP15.2■□□□□ 0.02
ACTN1-204ENST00000438964 MDM2Q00987 491 aaPredicted RBP15.2■□□□□ 0.02
ACTN1-204ENST00000438964 NUTM2AQ8IVF1 878 aaPredicted RBP15.2■□□□□ 0.02
ACTN1-204ENST00000438964 AFAP1L1Q8TED9 768 aa15.2■□□□□ 0.02
ACTN1-204ENST00000438964 MMS19Q96T76 1030 aa15.2■□□□□ 0.02
ACTN1-204ENST00000438964 A0A087X0B3 334 aa15.19■□□□□ 0.02
ACTN1-204ENST00000438964 MATR3P43243 847 aaKnown RBP eCLIP15.19■□□□□ 0.022e-6■■■■□ 22.4
ACTN1-204ENST00000438964 ESCO1Q5FWF5 840 aa15.19■□□□□ 0.02
ACTN1-204ENST00000438964 ANKRD24Q8TF21 1146 aa15.19■□□□□ 0.02
ACTN1-204ENST00000438964 SMARCC1Q92922 1105 aaPredicted RBP15.19■□□□□ 0.02
ACTN1-204ENST00000438964 NAPGQ99747 312 aaPredicted RBP15.19■□□□□ 0.02
ACTN1-204ENST00000438964 NBPF3Q9H094 633 aa15.19■□□□□ 0.02
ACTN1-204ENST00000438964 DEF6Q9H4E7 631 aa15.19■□□□□ 0.02
ACTN1-204ENST00000438964 TAB2Q9NYJ8 693 aa15.19■□□□□ 0.02
ACTN1-204ENST00000438964 RAB21Q9UL25 225 aa15.19■□□□□ 0.02
ACTN1-204ENST00000438964 TSPOAP1O95153 1857 aa15.19■□□□□ 0.02
ACTN1-204ENST00000438964 DPYDQ12882 1025 aa15.19■□□□□ 0.02
ACTN1-204ENST00000438964 BAZ2BQ9UIF8 2168 aaKnown RBP15.19■□□□□ 0.02
ACTN1-204ENST00000438964 GOLGA8AA7E2F4 631 aa15.19■□□□□ 0.02
ACTN1-204ENST00000438964 GUCY2CP25092 1073 aa15.19■□□□□ 0.02
ACTN1-204ENST00000438964 CTR9Q6PD62 1173 aa15.19■□□□□ 0.02
ACTN1-204ENST00000438964 TTLL7Q6ZT98 887 aa15.19■□□□□ 0.02
ACTN1-204ENST00000438964 IQUBQ8NA54 791 aa15.19■□□□□ 0.02
ACTN1-204ENST00000438964 MSANTD4Q8NCY6 345 aa15.19■□□□□ 0.02
ACTN1-204ENST00000438964 FAM71BQ8TC56 605 aa15.19■□□□□ 0.02
ACTN1-204ENST00000438964 CSRNP2Q9H175 543 aa15.19■□□□□ 0.02
ACTN1-204ENST00000438964 KAT14Q9H8E8 782 aa15.19■□□□□ 0.02
ACTN1-204ENST00000438964 UBN2Q6ZU65 1347 aa15.19■□□□□ 0.02
ACTN1-204ENST00000438964 APOA5Q6Q788 366 aa15.18■□□□□ 0.02
ACTN1-204ENST00000438964 DIS3L2Q8IYB7 885 aaKnown RBP15.18■□□□□ 0.02
ACTN1-204ENST00000438964 PPM1EQ8WY54 764 aa15.18■□□□□ 0.02
ACTN1-204ENST00000438964 CTNND2Q9UQB3 1225 aa15.18■□□□□ 0.02
ACTN1-204ENST00000438964 MFAP3LO75121 409 aa15.18■□□□□ 0.02
ACTN1-204ENST00000438964 IDH1O75874 414 aaKnown RBP15.18■□□□□ 0.02
ACTN1-204ENST00000438964 MNAT1P51948 309 aa15.18■□□□□ 0.02
ACTN1-204ENST00000438964 CTDSPL2Q05D32 466 aa15.18■□□□□ 0.02
ACTN1-204ENST00000438964 MYO6Q9UM54 1294 aa15.18■□□□□ 0.02
ACTN1-204ENST00000438964 EXOC5O00471 708 aa15.17■□□□□ 0.02
ACTN1-204ENST00000438964 PPP6R2O75170 966 aa15.17■□□□□ 0.02
ACTN1-204ENST00000438964 ATP1A1P05023 1023 aaKnown RBP15.17■□□□□ 0.02
ACTN1-204ENST00000438964 PPARAQ07869 468 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms