RNA–Protein interactions for RNA: ENST00000438322.1

LINC00475-207, long intergenic non-protein coding RNA 475, humanhuman

TSL 3 BASIC

Gene LINC00475, Length 424 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-207ENST00000438322 ADGRA1Q86SQ6 560 aa12.79□□□□□ -0.36
LINC00475-207ENST00000438322 MIGA1Q8NAN2 632 aa12.79□□□□□ -0.36
LINC00475-207ENST00000438322 TGFBRAP1Q8WUH2 860 aa12.79□□□□□ -0.36
LINC00475-207ENST00000438322 ARHGAP39Q9C0H5 1083 aa12.79□□□□□ -0.36
LINC00475-207ENST00000438322 SAP30BPQ9UHR5 308 aaKnown RBP12.79□□□□□ -0.36
LINC00475-207ENST00000438322 TNRC18O15417 2968 aaPredicted RBP12.79□□□□□ -0.36
LINC00475-207ENST00000438322 ATRNL1Q5VV63 1379 aa12.79□□□□□ -0.36
LINC00475-207ENST00000438322 BAG3O95817 575 aa12.78□□□□□ -0.36
LINC00475-207ENST00000438322 IGHDP01880 384 aa12.78□□□□□ -0.36
LINC00475-207ENST00000438322 DYNLL1P63167 89 aaKnown RBP12.78□□□□□ -0.36
LINC00475-207ENST00000438322 KIF22Q14807 665 aa12.78□□□□□ -0.36
LINC00475-207ENST00000438322 NOL9Q5SY16 702 aaKnown RBP12.78□□□□□ -0.36
LINC00475-207ENST00000438322 TRIM34Q9BYJ4 488 aa12.78□□□□□ -0.36
LINC00475-207ENST00000438322 OSBPL5Q9H0X9 879 aaPredicted RBP12.78□□□□□ -0.36
LINC00475-207ENST00000438322 PTPN22Q9Y2R2 807 aa12.78□□□□□ -0.36
LINC00475-207ENST00000438322 SIPA1L1O43166 1804 aa12.78□□□□□ -0.36
LINC00475-207ENST00000438322 MGAMO43451 1857 aa12.77□□□□□ -0.37
LINC00475-207ENST00000438322 PHF20L1A8MW92 1017 aa12.77□□□□□ -0.37
LINC00475-207ENST00000438322 TLR2O60603 784 aa12.77□□□□□ -0.37
LINC00475-207ENST00000438322 CYP2C8P10632 490 aa12.77□□□□□ -0.37
LINC00475-207ENST00000438322 PTPRAP18433 802 aa12.77□□□□□ -0.37
LINC00475-207ENST00000438322 RGS19P49795 217 aa12.77□□□□□ -0.37
LINC00475-207ENST00000438322 CRACR2BQ8N4Y2 399 aaPredicted RBP12.77□□□□□ -0.37
LINC00475-207ENST00000438322 MAGEB6Q8N7X4 407 aa12.77□□□□□ -0.37
LINC00475-207ENST00000438322 GPATCH3Q96I76 525 aa12.77□□□□□ -0.37
LINC00475-207ENST00000438322 DNAJC2Q99543 621 aaKnown RBP12.77□□□□□ -0.37
LINC00475-207ENST00000438322 ANTXR1Q9H6X2 564 aa12.77□□□□□ -0.37
LINC00475-207ENST00000438322 KCNH4Q9UQ05 1017 aa12.77□□□□□ -0.37
LINC00475-207ENST00000438322 ZBTB22O15209 634 aa12.76□□□□□ -0.37
LINC00475-207ENST00000438322 SMARCA5O60264 1052 aaPredicted RBP12.76□□□□□ -0.37
LINC00475-207ENST00000438322 ARHGEF6Q15052 776 aa12.76□□□□□ -0.37
LINC00475-207ENST00000438322 B4GALNT3Q6L9W6 998 aa12.76□□□□□ -0.37
LINC00475-207ENST00000438322 ANKRD23Q86SG2 305 aa12.76□□□□□ -0.37
LINC00475-207ENST00000438322 SMC5Q8IY18 1101 aa12.76□□□□□ -0.37
LINC00475-207ENST00000438322 CCDC136Q96JN2 1154 aa12.76□□□□□ -0.37
LINC00475-207ENST00000438322 PTCH2Q9Y6C5 1203 aa12.76□□□□□ -0.37
LINC00475-207ENST00000438322 HTTP42858 3142 aa12.76□□□□□ -0.37
LINC00475-207ENST00000438322 NAV1Q8NEY1 1877 aa12.76□□□□□ -0.37
LINC00475-207ENST00000438322 CENPFP49454 3210 aa12.75□□□□□ -0.37
LINC00475-207ENST00000438322 CTNND1O60716 968 aaKnown RBP12.75□□□□□ -0.37
LINC00475-207ENST00000438322 FMNL1O95466 1100 aaPredicted RBP12.75□□□□□ -0.37
LINC00475-207ENST00000438322 PLCG2P16885 1265 aa12.75□□□□□ -0.37
LINC00475-207ENST00000438322 FLT1P17948 1338 aa12.75□□□□□ -0.37
LINC00475-207ENST00000438322 USP5P45974 858 aa12.75□□□□□ -0.37
LINC00475-207ENST00000438322 LACTBP83111 547 aaPredicted RBP12.75□□□□□ -0.37
LINC00475-207ENST00000438322 SLC9C1Q4G0N8 1177 aa12.75□□□□□ -0.37
LINC00475-207ENST00000438322 PARK7Q99497 189 aaKnown RBP12.75□□□□□ -0.37
LINC00475-207ENST00000438322 PALD1Q9ULE6 856 aa12.75□□□□□ -0.37
LINC00475-207ENST00000438322 MYH7P12883 1935 aa12.74□□□□□ -0.37
LINC00475-207ENST00000438322 GOLIM4O00461 696 aa12.74□□□□□ -0.37
LINC00475-207ENST00000438322 CXCL11O14625 94 aa12.74□□□□□ -0.37
LINC00475-207ENST00000438322 GDF11O95390 407 aa12.74□□□□□ -0.37
LINC00475-207ENST00000438322 MAP3K12Q12852 859 aa12.74□□□□□ -0.37
LINC00475-207ENST00000438322 MOGSQ13724 837 aa12.74□□□□□ -0.37
LINC00475-207ENST00000438322 SMCR8Q8TEV9 937 aaPredicted RBP12.74□□□□□ -0.37
LINC00475-207ENST00000438322 SH3TC2Q8TF17 1288 aa12.74□□□□□ -0.37
LINC00475-207ENST00000438322 ZNF512BQ96KM6 892 aaPredicted RBP12.74□□□□□ -0.37
LINC00475-207ENST00000438322 ZCCHC17Q9NP64 241 aaKnown RBP12.74□□□□□ -0.37
LINC00475-207ENST00000438322 AFG3L2Q9Y4W6 797 aa12.74□□□□□ -0.37
LINC00475-207ENST00000438322 MYH8P13535 1937 aa12.74□□□□□ -0.37
LINC00475-207ENST00000438322 A0A0G2JLL6 359 aaPredicted RBP12.73□□□□□ -0.37
LINC00475-207ENST00000438322 POTEFA5A3E0 1075 aa12.73□□□□□ -0.37
LINC00475-207ENST00000438322 MAP4K4O95819 1239 aaPredicted RBP12.73□□□□□ -0.37
LINC00475-207ENST00000438322 PSMC4P43686 418 aa12.73□□□□□ -0.37
LINC00475-207ENST00000438322 HMGCS2P54868 508 aa12.73□□□□□ -0.37
LINC00475-207ENST00000438322 NUCB1Q02818 461 aa12.73□□□□□ -0.37
LINC00475-207ENST00000438322 SPP2Q13103 211 aa12.73□□□□□ -0.37
LINC00475-207ENST00000438322 RRP1BQ14684 758 aaKnown RBP12.73□□□□□ -0.37
LINC00475-207ENST00000438322 TREML2Q5T2D2 321 aa12.73□□□□□ -0.37
LINC00475-207ENST00000438322 GPAT2Q6NUI2 795 aa12.73□□□□□ -0.37
LINC00475-207ENST00000438322 FASTKD5Q7L8L6 764 aaKnown RBP12.73□□□□□ -0.37
LINC00475-207ENST00000438322 PRRT2Q7Z6L0 340 aaPredicted RBP12.73□□□□□ -0.37
LINC00475-207ENST00000438322 CHD1LQ86WJ1 897 aa12.73□□□□□ -0.37
LINC00475-207ENST00000438322 EDC3Q96F86 508 aaKnown RBP12.73□□□□□ -0.37
LINC00475-207ENST00000438322 PPP4R2Q9NY27 417 aa12.73□□□□□ -0.37
LINC00475-207ENST00000438322 PI4KBQ9UBF8 816 aa12.73□□□□□ -0.37
LINC00475-207ENST00000438322 TAOK2Q9UL54 1235 aa12.73□□□□□ -0.37
LINC00475-207ENST00000438322 COL2A1P02458 1487 aaPredicted RBP12.72□□□□□ -0.37
LINC00475-207ENST00000438322 LOC285556D6RIA3 1793 aa12.72□□□□□ -0.37
LINC00475-207ENST00000438322 ERC2O15083 957 aa12.72□□□□□ -0.37
LINC00475-207ENST00000438322 NPM3O75607 178 aaKnown RBP12.72□□□□□ -0.37
LINC00475-207ENST00000438322 HLA-DOAP06340 250 aa12.72□□□□□ -0.37
LINC00475-207ENST00000438322 CAP2P40123 477 aa12.72□□□□□ -0.37
LINC00475-207ENST00000438322 SHROOM1Q2M3G4 852 aaPredicted RBP12.72□□□□□ -0.37
LINC00475-207ENST00000438322 C17orf99Q6UX52 265 aa12.72□□□□□ -0.37
LINC00475-207ENST00000438322 CENPQQ7L2Z9 268 aaPredicted RBP12.72□□□□□ -0.37
LINC00475-207ENST00000438322 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.72□□□□□ -0.37
LINC00475-207ENST00000438322 TRIM47Q96LD4 638 aa12.72□□□□□ -0.37
LINC00475-207ENST00000438322 TMEM106CQ9BVX2 250 aa12.72□□□□□ -0.37
LINC00475-207ENST00000438322 LNPKQ9C0E8 428 aa12.72□□□□□ -0.37
LINC00475-207ENST00000438322 DOCK3Q8IZD9 2030 aa12.72□□□□□ -0.37
LINC00475-207ENST00000438322 BAZ2AQ9UIF9 1905 aaKnown RBP12.72□□□□□ -0.37
LINC00475-207ENST00000438322 RBBP6Q7Z6E9 1792 aaKnown RBP12.71□□□□□ -0.37
LINC00475-207ENST00000438322 MYPNQ86TC9 1320 aa12.71□□□□□ -0.37
LINC00475-207ENST00000438322 USP17L5A8MUK1 530 aa12.71□□□□□ -0.37
LINC00475-207ENST00000438322 TBC1D12O60347 775 aa12.71□□□□□ -0.37
LINC00475-207ENST00000438322 ATP5JP18859 108 aa12.71□□□□□ -0.37
LINC00475-207ENST00000438322 OSBPP22059 807 aa12.71□□□□□ -0.37
LINC00475-207ENST00000438322 CTGFP29279 349 aa12.71□□□□□ -0.37
LINC00475-207ENST00000438322 PPP4CP60510 307 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms