RNA–Protein interactions for RNA: ENST00000438204.6

RPE-210, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-210ENST00000438204 NUDT12Q9BQG2 462 aa11.62□□□□□ -0.55
RPE-210ENST00000438204 PUS3Q9BZE2 481 aaKnown RBP11.62□□□□□ -0.55
RPE-210ENST00000438204 PRDM12Q9H4Q4 367 aa11.62□□□□□ -0.55
RPE-210ENST00000438204 LRRC37A2A6NM11 1700 aa11.62□□□□□ -0.55
RPE-210ENST00000438204 CHD9Q3L8U1 2897 aa11.62□□□□□ -0.55
RPE-210ENST00000438204 MAST3O60307 1309 aa11.61□□□□□ -0.55
RPE-210ENST00000438204 TRIM43BA6NCK2 446 aa11.61□□□□□ -0.55
RPE-210ENST00000438204 FRAT2O75474 233 aaPredicted RBP11.61□□□□□ -0.55
RPE-210ENST00000438204 ITGB8P26012 769 aa11.61□□□□□ -0.55
RPE-210ENST00000438204 GCLCP48506 637 aaPredicted RBP11.61□□□□□ -0.55
RPE-210ENST00000438204 HHIPL2Q6UWX4 724 aa11.61□□□□□ -0.55
RPE-210ENST00000438204 LMBR1LQ6UX01 489 aa11.61□□□□□ -0.55
RPE-210ENST00000438204 FBXO33Q7Z6M2 555 aa11.61□□□□□ -0.55
RPE-210ENST00000438204 VPS37DQ86XT2 251 aa11.61□□□□□ -0.55
RPE-210ENST00000438204 TSPYL6Q8N831 410 aa11.61□□□□□ -0.55
RPE-210ENST00000438204 SOCS4Q8WXH5 440 aa11.61□□□□□ -0.55
RPE-210ENST00000438204 TRIM43Q96BQ3 446 aaPredicted RBP11.61□□□□□ -0.55
RPE-210ENST00000438204 TIFAQ96CG3 184 aa11.61□□□□□ -0.55
RPE-210ENST00000438204 ASCC2Q9H1I8 757 aaPredicted RBP11.61□□□□□ -0.55
RPE-210ENST00000438204 CHD7Q9P2D1 2997 aa11.61□□□□□ -0.55
RPE-210ENST00000438204 XRCC5P13010 732 aaKnown RBP11.6□□□□□ -0.55
RPE-210ENST00000438204 HMGCS2P54868 508 aa11.6□□□□□ -0.55
RPE-210ENST00000438204 TFF2Q03403 129 aa11.6□□□□□ -0.55
RPE-210ENST00000438204 ADGRE1Q14246 886 aa11.6□□□□□ -0.55
RPE-210ENST00000438204 TMEM31Q5JXX7 168 aa11.6□□□□□ -0.55
RPE-210ENST00000438204 AKNAD1Q5T1N1 836 aa11.6□□□□□ -0.55
RPE-210ENST00000438204 GJC2Q5T442 439 aaPredicted RBP11.6□□□□□ -0.55
RPE-210ENST00000438204 SH3BP5LQ7L8J4 393 aa11.6□□□□□ -0.55
RPE-210ENST00000438204 MYH16Q9H6N6 1097 aa11.6□□□□□ -0.55
RPE-210ENST00000438204 TXNRD2Q9NNW7 524 aa11.6□□□□□ -0.55
RPE-210ENST00000438204 C11orf16Q9NQ32 467 aa11.6□□□□□ -0.55
RPE-210ENST00000438204 MORF4L1Q9UBU8 362 aa11.6□□□□□ -0.55
RPE-210ENST00000438204 LRRFIP2Q9Y608 721 aaKnown RBP11.6□□□□□ -0.55
RPE-210ENST00000438204 RFX7Q2KHR2 1363 aa11.59□□□□□ -0.55
RPE-210ENST00000438204 FAM196BA6NMK8 535 aa11.59□□□□□ -0.55
RPE-210ENST00000438204 DNM1LO00429 736 aa11.59□□□□□ -0.55
RPE-210ENST00000438204 MRE11P49959 708 aa11.59□□□□□ -0.55
RPE-210ENST00000438204 KCNQ1P51787 676 aa11.59□□□□□ -0.55
RPE-210ENST00000438204 CCDC57Q2TAC2 916 aa11.59□□□□□ -0.55
RPE-210ENST00000438204 PROCA1Q8NCQ7 364 aaPredicted RBP11.59□□□□□ -0.55
RPE-210ENST00000438204 USP6NLQ92738 828 aa11.59□□□□□ -0.55
RPE-210ENST00000438204 APBA2Q99767 749 aa11.59□□□□□ -0.55
RPE-210ENST00000438204 MRIQ9BWK5 157 aa11.59□□□□□ -0.55
RPE-210ENST00000438204 PORCNQ9H237 461 aa11.59□□□□□ -0.55
RPE-210ENST00000438204 SPINK5Q9NQ38 1064 aaPredicted RBP11.59□□□□□ -0.55
RPE-210ENST00000438204 FLRT1Q9NZU1 646 aa11.59□□□□□ -0.55
RPE-210ENST00000438204 DDX20Q9UHI6 824 aaKnown RBP11.59□□□□□ -0.55
RPE-210ENST00000438204 BMP1P13497 986 aa11.58□□□□□ -0.56
RPE-210ENST00000438204 IGFBP4P22692 258 aa11.58□□□□□ -0.56
RPE-210ENST00000438204 PBX2P40425 430 aa11.58□□□□□ -0.56
RPE-210ENST00000438204 RGS3P49796 1198 aa11.58□□□□□ -0.56
RPE-210ENST00000438204 SPP2Q13103 211 aa11.58□□□□□ -0.56
RPE-210ENST00000438204 SLC39A5Q6ZMH5 540 aa11.58□□□□□ -0.56
RPE-210ENST00000438204 KHSRPQ92945 711 aaKnown RBP eCLIP11.58□□□□□ -0.563e-8■■■■□ 21.2
RPE-210ENST00000438204 DDTLA6NHG4 134 aaPredicted RBP11.57□□□□□ -0.56
RPE-210ENST00000438204 CNGA1P29973 690 aa11.57□□□□□ -0.56
RPE-210ENST00000438204 RGS2P41220 211 aa11.57□□□□□ -0.56
RPE-210ENST00000438204 MORN1Q5T089 497 aa11.57□□□□□ -0.56
RPE-210ENST00000438204 ANO1Q5XXA6 986 aa11.57□□□□□ -0.56
RPE-210ENST00000438204 GPR142Q7Z601 462 aa11.57□□□□□ -0.56
RPE-210ENST00000438204 ZSCAN29Q8IWY8 852 aaPredicted RBP11.57□□□□□ -0.56
RPE-210ENST00000438204 TRMT44Q8IYL2 757 aaKnown RBP11.57□□□□□ -0.56
RPE-210ENST00000438204 LPAR1Q92633 364 aa11.57□□□□□ -0.56
RPE-210ENST00000438204 RUNDC1Q96C34 613 aa11.57□□□□□ -0.56
RPE-210ENST00000438204 USP40Q9NVE5 1235 aa11.57□□□□□ -0.56
RPE-210ENST00000438204 IFT57Q9NWB7 429 aa11.57□□□□□ -0.56
RPE-210ENST00000438204 RNF216Q9NWF9 866 aaPredicted RBP11.57□□□□□ -0.56
RPE-210ENST00000438204 GRXCR1A8MXD5 290 aa11.56□□□□□ -0.56
RPE-210ENST00000438204 CTNND1O60716 968 aaKnown RBP11.56□□□□□ -0.56
RPE-210ENST00000438204 MYCNP04198 464 aaPredicted RBP11.56□□□□□ -0.56
RPE-210ENST00000438204 PRDX5P30044 214 aa11.56□□□□□ -0.56
RPE-210ENST00000438204 IRX3P78415 501 aaPredicted RBP11.56□□□□□ -0.56
RPE-210ENST00000438204 SNX17Q15036 470 aa11.56□□□□□ -0.56
RPE-210ENST00000438204 PPP4R3CPQ6ZMV5 832 aa11.56□□□□□ -0.56
RPE-210ENST00000438204 MICALL1Q8N3F8 863 aa11.56□□□□□ -0.56
RPE-210ENST00000438204 TRPV1Q8NER1 839 aa11.56□□□□□ -0.56
RPE-210ENST00000438204 LINS1Q8NG48 757 aa11.56□□□□□ -0.56
RPE-210ENST00000438204 DNAAF4Q8WXU2 420 aa11.56□□□□□ -0.56
RPE-210ENST00000438204 STK31Q9BXU1 1019 aa11.56□□□□□ -0.56
RPE-210ENST00000438204 SUGT1Q9Y2Z0 365 aa11.56□□□□□ -0.56
RPE-210ENST00000438204 NDUFB9Q9Y6M9 179 aa11.56□□□□□ -0.56
RPE-210ENST00000438204 PRRC2BQ5JSZ5 2229 aaKnown RBP11.56□□□□□ -0.56
RPE-210ENST00000438204 CACNA1FO60840 1977 aa11.56□□□□□ -0.56
RPE-210ENST00000438204 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.55□□□□□ -0.56
RPE-210ENST00000438204 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.55□□□□□ -0.56
RPE-210ENST00000438204 GNAI1P63096 354 aa11.55□□□□□ -0.56
RPE-210ENST00000438204 PABPC4Q13310 644 aaKnown RBP eCLIP11.55□□□□□ -0.56
RPE-210ENST00000438204 CAVIN4Q5BKX8 364 aa11.55□□□□□ -0.56
RPE-210ENST00000438204 FERMT2Q96AC1 680 aa11.55□□□□□ -0.56
RPE-210ENST00000438204 PAGR1Q9BTK6 254 aa11.55□□□□□ -0.56
RPE-210ENST00000438204 PBX4Q9BYU1 374 aa11.55□□□□□ -0.56
RPE-210ENST00000438204 DDX4Q9NQI0 724 aaKnown RBP11.55□□□□□ -0.56
RPE-210ENST00000438204 CXXC1Q9P0U4 656 aaPredicted RBP11.55□□□□□ -0.56
RPE-210ENST00000438204 SIPA1L1O43166 1804 aa11.55□□□□□ -0.56
RPE-210ENST00000438204 KBTBD13C9JR72 458 aa11.54□□□□□ -0.56
RPE-210ENST00000438204 MAPK4P31152 587 aa11.54□□□□□ -0.56
RPE-210ENST00000438204 HERVK_113P62684 666 aa11.54□□□□□ -0.56
RPE-210ENST00000438204 TLE2Q04725 743 aa11.54□□□□□ -0.56
RPE-210ENST00000438204 FLIIQ13045 1269 aa11.54□□□□□ -0.56
RPE-210ENST00000438204 FKBP5Q13451 457 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms