RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 PLEKHM2Q8IWE5 1019 aa11.56□□□□□ -0.56
SHPRH-206ENST00000438092 RABEP2Q9H5N1 569 aa11.56□□□□□ -0.56
SHPRH-206ENST00000438092 USP40Q9NVE5 1235 aa11.56□□□□□ -0.56
SHPRH-206ENST00000438092 BSPRYQ5W0U4 402 aa11.56□□□□□ -0.56
SHPRH-206ENST00000438092 TRIM7Q9C029 511 aa11.56□□□□□ -0.56
SHPRH-206ENST00000438092 HMGXB3Q12766 1538 aa11.56□□□□□ -0.56
SHPRH-206ENST00000438092 SLC27A2O14975 620 aa11.56□□□□□ -0.56
SHPRH-206ENST00000438092 CASC4Q6P4E1 433 aa11.56□□□□□ -0.56
SHPRH-206ENST00000438092 SESTD1Q86VW0 696 aa11.56□□□□□ -0.56
SHPRH-206ENST00000438092 SPATA24Q86W54 205 aa11.56□□□□□ -0.56
SHPRH-206ENST00000438092 METTL22Q9BUU2 404 aaPredicted RBP11.56□□□□□ -0.56
SHPRH-206ENST00000438092 MRPL44Q9H9J2 332 aaKnown RBP11.56□□□□□ -0.56
SHPRH-206ENST00000438092 TTF2Q9UNY4 1162 aaKnown RBP11.56□□□□□ -0.56
SHPRH-206ENST00000438092 ZAP70P43403 619 aa11.56□□□□□ -0.56
SHPRH-206ENST00000438092 KSR1Q8IVT5 923 aa11.56□□□□□ -0.56
SHPRH-206ENST00000438092 EYA2O00167 538 aa11.56□□□□□ -0.56
SHPRH-206ENST00000438092 CD19P15391 556 aa11.56□□□□□ -0.56
SHPRH-206ENST00000438092 ATP2A2P16615 1042 aaKnown RBP11.56□□□□□ -0.56
SHPRH-206ENST00000438092 TBC1D8BQ0IIM8 1120 aa11.56□□□□□ -0.56
SHPRH-206ENST00000438092 MKRN3Q13064 507 aaKnown RBP11.56□□□□□ -0.56
SHPRH-206ENST00000438092 UTP14CQ5TAP6 766 aaKnown RBP11.56□□□□□ -0.56
SHPRH-206ENST00000438092 GLG1Q92896 1179 aa11.56□□□□□ -0.56
SHPRH-206ENST00000438092 JAKMIP2Q96AA8 810 aa11.56□□□□□ -0.56
SHPRH-206ENST00000438092 BLZF1Q9H2G9 400 aa11.56□□□□□ -0.56
SHPRH-206ENST00000438092 HSPA1LP34931 641 aa11.55□□□□□ -0.56
SHPRH-206ENST00000438092 PTPROQ16827 1216 aa11.55□□□□□ -0.56
SHPRH-206ENST00000438092 SNX29Q8TEQ0 813 aa11.55□□□□□ -0.56
SHPRH-206ENST00000438092 DDX21Q9NR30 783 aaKnown RBP eCLIP11.55□□□□□ -0.56
SHPRH-206ENST00000438092 RAPGEF6Q8TEU7 1601 aa11.55□□□□□ -0.56
SHPRH-206ENST00000438092 A0A1W2PP64 1363 aa11.55□□□□□ -0.56
SHPRH-206ENST00000438092 ZNF532Q9HCE3 1301 aa11.55□□□□□ -0.56
SHPRH-206ENST00000438092 PRPF6O94906 941 aaKnown RBP11.55□□□□□ -0.56
SHPRH-206ENST00000438092 SUCLG2Q96I99 432 aa11.55□□□□□ -0.56
SHPRH-206ENST00000438092 LPXNO60711 386 aa11.55□□□□□ -0.56
SHPRH-206ENST00000438092 HPDP32754 393 aaPredicted RBP11.55□□□□□ -0.56
SHPRH-206ENST00000438092 IGBP1P78318 339 aa11.55□□□□□ -0.56
SHPRH-206ENST00000438092 ASIC2Q16515 512 aa11.55□□□□□ -0.56
SHPRH-206ENST00000438092 CALCRLQ16602 461 aa11.55□□□□□ -0.56
SHPRH-206ENST00000438092 ARHGAP44Q17R89 818 aa11.55□□□□□ -0.56
SHPRH-206ENST00000438092 KIAA0825Q8IV33 1275 aa11.55□□□□□ -0.56
SHPRH-206ENST00000438092 MED10Q9BTT4 135 aa11.55□□□□□ -0.56
SHPRH-206ENST00000438092 HELLSQ9NRZ9 838 aa11.55□□□□□ -0.56
SHPRH-206ENST00000438092 ANAPC4Q9UJX5 808 aa11.55□□□□□ -0.56
SHPRH-206ENST00000438092 SOS1Q07889 1333 aaPredicted RBP11.55□□□□□ -0.56
SHPRH-206ENST00000438092 RPS6KB1P23443 525 aa11.55□□□□□ -0.56
SHPRH-206ENST00000438092 RPRD2Q5VT52 1461 aaKnown RBP11.55□□□□□ -0.56
SHPRH-206ENST00000438092 CALUO43852 315 aaPredicted RBP11.55□□□□□ -0.56
SHPRH-206ENST00000438092 MNAT1P51948 309 aa11.55□□□□□ -0.56
SHPRH-206ENST00000438092 TBC1D10BQ4KMP7 808 aaPredicted RBP11.55□□□□□ -0.56
SHPRH-206ENST00000438092 SPATA5Q8NB90 893 aa11.55□□□□□ -0.56
SHPRH-206ENST00000438092 PSMD6Q15008 389 aa11.54□□□□□ -0.56
SHPRH-206ENST00000438092 C4orf50Q6ZRC1 276 aa11.54□□□□□ -0.56
SHPRH-206ENST00000438092 CPLX4Q7Z7G2 160 aa11.54□□□□□ -0.56
SHPRH-206ENST00000438092 NOP9Q86U38 636 aaKnown RBP11.54□□□□□ -0.56
SHPRH-206ENST00000438092 EDC3Q96F86 508 aaKnown RBP11.54□□□□□ -0.56
SHPRH-206ENST00000438092 VPS54Q9P1Q0 977 aa11.54□□□□□ -0.56
SHPRH-206ENST00000438092 MTUS1Q9ULD2 1270 aa11.54□□□□□ -0.56
SHPRH-206ENST00000438092 CSADQ9Y600 493 aa11.54□□□□□ -0.56
SHPRH-206ENST00000438092 KCNQ4P56696 695 aa11.54□□□□□ -0.56
SHPRH-206ENST00000438092 HERC4Q5GLZ8 1057 aaPredicted RBP11.54□□□□□ -0.56
SHPRH-206ENST00000438092 ARHGEF16Q5VV41 709 aa11.54□□□□□ -0.56
SHPRH-206ENST00000438092 WDR66Q8TBY9 1149 aa11.54□□□□□ -0.56
SHPRH-206ENST00000438092 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.54□□□□□ -0.56
SHPRH-206ENST00000438092 TRPC6Q9Y210 931 aa11.54□□□□□ -0.56
SHPRH-206ENST00000438092 AFG3L2Q9Y4W6 797 aa11.54□□□□□ -0.56
SHPRH-206ENST00000438092 FAM102BQ5T8I3 360 aa11.54□□□□□ -0.56
SHPRH-206ENST00000438092 ZMYM3Q14202 1370 aa11.54□□□□□ -0.56
SHPRH-206ENST00000438092 SEC24BO95487 1268 aa11.54□□□□□ -0.56
SHPRH-206ENST00000438092 ADCY7P51828 1080 aa11.54□□□□□ -0.56
SHPRH-206ENST00000438092 CALCOCO2Q13137 446 aa11.54□□□□□ -0.56
SHPRH-206ENST00000438092 BRAPQ7Z569 592 aa11.54□□□□□ -0.56
SHPRH-206ENST00000438092 ST7Q9NRC1 585 aa11.54□□□□□ -0.56
SHPRH-206ENST00000438092 TEX14Q8IWB6 1497 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 IGSF3O75054 1194 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 DEXIO95424 95 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 ALAS1P13196 640 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 TNNI1P19237 187 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 TFAP4Q01664 338 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 NCAPG2Q86XI2 1143 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 LRRC47Q8N1G4 583 aaKnown RBP11.53□□□□□ -0.56
SHPRH-206ENST00000438092 CALCOCO1Q9P1Z2 691 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 OPA1O60313 960 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 Q3C1V9 767 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 CSGALNACT2Q8N6G5 542 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 ANKS4BQ8N8V4 417 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 EPSTI1Q96J88 318 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 MTRF1LQ9UGC7 380 aaKnown RBP11.53□□□□□ -0.56
SHPRH-206ENST00000438092 ELP1O95163 1332 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 AKR1B15C9JRZ8 316 aaPredicted RBP11.53□□□□□ -0.56
SHPRH-206ENST00000438092 VIMP08670 466 aaKnown RBP11.53□□□□□ -0.56
SHPRH-206ENST00000438092 MAN1A1P33908 653 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 PARP10Q53GL7 1025 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 TTC38Q5R3I4 469 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 DCUN1D2Q6PH85 259 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 SLC52A2Q9HAB3 445 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 DNM2P50570 870 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 CARD14Q9BXL6 1004 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 SPDYE16A6NNV3 312 aaPredicted RBP11.53□□□□□ -0.56
SHPRH-206ENST00000438092 SPDYE2Q495Y8 402 aa11.53□□□□□ -0.56
SHPRH-206ENST00000438092 HAUS3Q68CZ6 603 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms