RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 GRIN2CQ14957 1233 aa15.63■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 CDC42EP5Q6NZY7 148 aa15.63■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 ZNF579Q8NAF0 562 aaKnown RBP15.63■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 TBC1D22AQ8WUA7 517 aa15.63■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 IFT57Q9NWB7 429 aa15.63■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 ATRNL1Q5VV63 1379 aa15.62■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 LTBP2Q14767 1821 aa15.62■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 PEX10O60683 326 aa15.62■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 FRAT2O75474 233 aaPredicted RBP15.62■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 PSEN1P49768 467 aa15.62■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 TAF7LQ5H9L4 462 aa15.62■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 HHIPL2Q6UWX4 724 aa15.62■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 ADAMTS19Q8TE59 1207 aa15.62■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 MAST2Q6P0Q8 1798 aa15.62■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 CCDC57Q2TAC2 916 aa15.61■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 VPS37DQ86XT2 251 aa15.61■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 CCER1Q8TC90 406 aaPredicted RBP15.61■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 PPM1EQ8WY54 764 aa15.61■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 MFRPQ9BY79 579 aa15.61■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 MYH16Q9H6N6 1097 aa15.61■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 PHIPQ8WWQ0 1821 aa15.6■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 GNAI1P63096 354 aa15.6■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 CCL14Q16627 93 aa15.6■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 DAGLAQ9Y4D2 1042 aa15.6■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 SYNGAP1Q96PV0 1343 aa15.6■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 RTP1P59025 263 aa15.59■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 DIXDC1Q155Q3 683 aa15.59■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 SH3BP5LQ7L8J4 393 aa15.59■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 LINS1Q8NG48 757 aa15.59■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 DNAAF4Q8WXU2 420 aa15.59■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 BADQ92934 168 aa15.59■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 ASB2Q96Q27 587 aa15.59■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 UHRF1Q96T88 793 aaPredicted RBP15.59■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 PRKAG2Q9UGJ0 569 aa15.59■□□□□ 0.09
SMAD9-IT1-201ENST00000437983 GCLCP48506 637 aaPredicted RBP15.58■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 STK31Q9BXU1 1019 aa15.58■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 PNMA3Q9UL41 463 aa15.58■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 MAST3O60307 1309 aa15.58■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 ZKSCAN1P17029 563 aaPredicted RBP15.57■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 KCNV2Q8TDN2 545 aa15.57■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 ATXN2LQ8WWM7 1075 aaKnown RBP15.57■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 NECAB3Q96P71 396 aaPredicted RBP15.57■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 NUDT12Q9BQG2 462 aa15.57■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 ASCC2Q9H1I8 757 aaPredicted RBP15.57■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 USP40Q9NVE5 1235 aa15.57■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 ADAMTS8Q9UP79 889 aa15.57■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 ATP11BQ9Y2G3 1177 aa15.57■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 LRRFIP2Q9Y608 721 aaKnown RBP15.57■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 XRCC5P13010 732 aaKnown RBP15.56■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 FXR2P51116 673 aaKnown RBP eCLIP15.56■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 FLIIQ13045 1269 aa15.56■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 PDE3AQ14432 1141 aa15.56■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 PRDM5Q9NQX1 630 aaPredicted RBP15.56■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 WDR70Q9NW82 654 aa15.56■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 SUGT1Q9Y2Z0 365 aa15.56■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 PIEZO1Q92508 2521 aa15.56■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 CTNND1O60716 968 aaKnown RBP15.55■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 MAP3K10Q02779 954 aa15.55■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 SPP2Q13103 211 aa15.55■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 CAVIN4Q5BKX8 364 aa15.55■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 POTEEQ6S8J3 1075 aa15.55■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 SH3RF1Q7Z6J0 888 aa15.55■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 PROCA1Q8NCQ7 364 aaPredicted RBP15.55■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 USP6NLQ92738 828 aa15.55■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 CHMP4AQ9BY43 222 aa15.55■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 TXNRD2Q9NNW7 524 aa15.55■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 MORF4L1Q9UBU8 362 aa15.55■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 DDTLA6NHG4 134 aaPredicted RBP15.54■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 RGS3P49796 1198 aa15.54■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 EPHB4P54760 987 aa15.54■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 HMGCS2P54868 508 aa15.54■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 FKBP5Q13451 457 aaPredicted RBP15.54■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 TSR2Q969E8 191 aaKnown RBP15.54■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 THEGQ9P2T0 379 aa15.54■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 DOCK1Q14185 1865 aa15.54■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 FRMPD3Q5JV73 1810 aa15.54■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 DOCK2Q92608 1830 aa15.54■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 TRIM43BA6NCK2 446 aa15.53■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 MRPS5P82675 430 aaKnown RBP15.53■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 LRRC24Q50LG9 513 aa15.53■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 SOCS4Q8WXH5 440 aa15.53■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 TRIM43Q96BQ3 446 aaPredicted RBP15.53■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 C1QTNF1Q9BXJ1 281 aa15.53■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 MROH5Q6ZUA9 1318 aa15.52■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 F6X3S4 739 aa15.52■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 DNAJB2P25686 324 aa15.52■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 ITGB8P26012 769 aa15.52■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 PRDX5P30044 214 aa15.52■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 Q3C1V9 767 aa15.52■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 ALYREFQ86V81 257 aaKnown RBP15.52■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 ZSCAN29Q8IWY8 852 aaPredicted RBP15.52■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 TRMT44Q8IYL2 757 aaKnown RBP15.52■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 RNPC3Q96LT9 517 aaKnown RBP15.52■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 LRFN3Q9BTN0 628 aa15.52■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 ZNF576Q9H609 170 aa15.52■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 PDLIM7Q9NR12 457 aa15.52■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 FLRT1Q9NZU1 646 aa15.52■□□□□ 0.08
SMAD9-IT1-201ENST00000437983 LOC285556D6RIA3 1793 aa15.52■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 FAM196BA6NMK8 535 aa15.51■□□□□ 0.07
SMAD9-IT1-201ENST00000437983 APAF1O14727 1248 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms