RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 ROBO3Q96MS0 1386 aa25.27■■□□□ 1.64
YBX1-203ENST00000436427 B4E1Z4 1266 aa25.26■■□□□ 1.63
YBX1-203ENST00000436427 PRDM1O75626 825 aa25.26■■□□□ 1.63
YBX1-203ENST00000436427 PDRG1Q9NUG6 133 aa25.26■■□□□ 1.63
YBX1-203ENST00000436427 CNTNAP1P78357 1384 aa25.25■■□□□ 1.63
YBX1-203ENST00000436427 DDTLA6NHG4 134 aaPredicted RBP25.25■■□□□ 1.63
YBX1-203ENST00000436427 PCP11498 1178 aaKnown RBP25.25■■□□□ 1.63
YBX1-203ENST00000436427 TNNI2P48788 182 aa25.25■■□□□ 1.63
YBX1-203ENST00000436427 TNFAIP1Q13829 316 aa25.25■■□□□ 1.63
YBX1-203ENST00000436427 FAM151AQ8WW52 585 aa25.25■■□□□ 1.63
YBX1-203ENST00000436427 TCEANC2Q96MN5 208 aa25.25■■□□□ 1.63
YBX1-203ENST00000436427 HIRAP54198 1017 aaPredicted RBP25.24■■□□□ 1.63
YBX1-203ENST00000436427 ANGEL2Q5VTE6 544 aaKnown RBP25.24■■□□□ 1.63
YBX1-203ENST00000436427 DHX32Q7L7V1 743 aaKnown RBP25.24■■□□□ 1.63
YBX1-203ENST00000436427 SH3BP5LQ7L8J4 393 aa25.24■■□□□ 1.63
YBX1-203ENST00000436427 CHST3Q7LGC8 479 aa25.24■■□□□ 1.63
YBX1-203ENST00000436427 FAM83AQ86UY5 434 aa25.24■■□□□ 1.63
YBX1-203ENST00000436427 MB21D2Q8IYB1 491 aaPredicted RBP25.24■■□□□ 1.63
YBX1-203ENST00000436427 SCAF8Q9UPN6 1271 aaKnown RBP25.24■■□□□ 1.63
YBX1-203ENST00000436427 COL2A1P02458 1487 aaPredicted RBP25.24■■□□□ 1.63
YBX1-203ENST00000436427 KDM4AO75164 1064 aa25.23■■□□□ 1.63
YBX1-203ENST00000436427 MCM5P33992 734 aa25.23■■□□□ 1.63
YBX1-203ENST00000436427 C16orf86Q6ZW13 317 aa25.23■■□□□ 1.63
YBX1-203ENST00000436427 MKNK2Q9HBH9 465 aa25.23■■□□□ 1.63
YBX1-203ENST00000436427 SERPINB13Q9UIV8 391 aa25.23■■□□□ 1.63
YBX1-203ENST00000436427 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.23■■□□□ 1.63
YBX1-203ENST00000436427 ATRNL1Q5VV63 1379 aa25.23■■□□□ 1.63
YBX1-203ENST00000436427 EPHX2P34913 555 aa25.22■■□□□ 1.63
YBX1-203ENST00000436427 SLC44A5Q8NCS7 719 aa25.22■■□□□ 1.63
YBX1-203ENST00000436427 ESR2Q92731 530 aa25.22■■□□□ 1.63
YBX1-203ENST00000436427 CSRNP1Q96S65 589 aa25.22■■□□□ 1.63
YBX1-203ENST00000436427 TMEM39BQ9GZU3 492 aa25.22■■□□□ 1.63
YBX1-203ENST00000436427 ZNF287Q9HBT7 754 aa25.22■■□□□ 1.63
YBX1-203ENST00000436427 GGA3Q9NZ52 723 aa25.22■■□□□ 1.63
YBX1-203ENST00000436427 PI4KBQ9UBF8 816 aa25.22■■□□□ 1.63
YBX1-203ENST00000436427 IQCA1LA6NCM1 817 aa25.22■■□□□ 1.63
YBX1-203ENST00000436427 RANBP6O60518 1105 aaKnown RBP25.22■■□□□ 1.63
YBX1-203ENST00000436427 CD2BP2O95400 341 aaKnown RBP25.22■■□□□ 1.63
YBX1-203ENST00000436427 FGRP09769 529 aa25.22■■□□□ 1.63
YBX1-203ENST00000436427 CDK8P49336 464 aa25.22■■□□□ 1.63
YBX1-203ENST00000436427 CRACR2BQ8N4Y2 399 aaPredicted RBP25.22■■□□□ 1.63
YBX1-203ENST00000436427 NKX2-3Q8TAU0 364 aa25.22■■□□□ 1.63
YBX1-203ENST00000436427 TTC14Q96N46 770 aa25.22■■□□□ 1.63
YBX1-203ENST00000436427 TRIM34Q9BYJ4 488 aa25.22■■□□□ 1.63
YBX1-203ENST00000436427 LRRC2Q9BYS8 371 aa25.22■■□□□ 1.63
YBX1-203ENST00000436427 PRC1O43663 620 aa25.21■■□□□ 1.63
YBX1-203ENST00000436427 ORC4O43929 436 aa25.21■■□□□ 1.63
YBX1-203ENST00000436427 FGD1P98174 961 aa25.21■■□□□ 1.63
YBX1-203ENST00000436427 RASA3Q14644 834 aa25.21■■□□□ 1.63
YBX1-203ENST00000436427 NOL8Q76FK4 1167 aaKnown RBP25.21■■□□□ 1.63
YBX1-203ENST00000436427 CYB5R4Q7L1T6 521 aa25.21■■□□□ 1.63
YBX1-203ENST00000436427 APOBEC3FQ8IUX4 373 aaKnown RBP25.21■■□□□ 1.63
YBX1-203ENST00000436427 IL27Q8NEV9 243 aa25.21■■□□□ 1.63
YBX1-203ENST00000436427 EHD4Q9H223 541 aa25.21■■□□□ 1.63
YBX1-203ENST00000436427 WDR90Q96KV7 1748 aa25.2■■□□□ 1.62
YBX1-203ENST00000436427 AK2P54819 239 aa25.2■■□□□ 1.62
YBX1-203ENST00000436427 EXOSC10Q01780 885 aaKnown RBP25.2■■□□□ 1.62
YBX1-203ENST00000436427 HSCBQ8IWL3 235 aa25.2■■□□□ 1.62
YBX1-203ENST00000436427 ZSWIM5Q9P217 1185 aa25.2■■□□□ 1.62
YBX1-203ENST00000436427 SCN4AP35499 1836 aa25.19■■□□□ 1.62
YBX1-203ENST00000436427 ANTXR2P58335 489 aa25.19■■□□□ 1.62
YBX1-203ENST00000436427 GABPAQ06546 454 aa25.19■■□□□ 1.62
YBX1-203ENST00000436427 Q6ZUG5 572 aa25.19■■□□□ 1.62
YBX1-203ENST00000436427 USP50Q70EL3 339 aaPredicted RBP25.19■■□□□ 1.62
YBX1-203ENST00000436427 SNX21Q969T3 373 aa25.19■■□□□ 1.62
YBX1-203ENST00000436427 SWAP70Q9UH65 585 aa25.19■■□□□ 1.62
YBX1-203ENST00000436427 BECN1Q14457 450 aa25.18■■□□□ 1.62
YBX1-203ENST00000436427 ZNF444Q8N0Y2 327 aaPredicted RBP25.18■■□□□ 1.62
YBX1-203ENST00000436427 DEFB129Q9H1M3 183 aa25.18■■□□□ 1.62
YBX1-203ENST00000436427 SIPA1L1O43166 1804 aa25.18■■□□□ 1.62
YBX1-203ENST00000436427 TSPY2A6NKD2 308 aa25.17■■□□□ 1.62
YBX1-203ENST00000436427 SLURP2P0DP57 97 aa25.17■■□□□ 1.62
YBX1-203ENST00000436427 FAM47AQ5JRC9 791 aa25.17■■□□□ 1.62
YBX1-203ENST00000436427 FOXP4Q8IVH2 680 aaPredicted RBP25.17■■□□□ 1.62
YBX1-203ENST00000436427 CDAN1Q8IWY9 1227 aa25.17■■□□□ 1.62
YBX1-203ENST00000436427 TBC1D2Q9BYX2 928 aa25.17■■□□□ 1.62
YBX1-203ENST00000436427 TAF1DQ9H5J8 278 aaPredicted RBP25.17■■□□□ 1.62
YBX1-203ENST00000436427 WDR19Q8NEZ3 1342 aa25.17■■□□□ 1.62
YBX1-203ENST00000436427 FAM196BA6NMK8 535 aa25.17■■□□□ 1.62
YBX1-203ENST00000436427 POTECB2RU33 542 aa25.17■■□□□ 1.62
YBX1-203ENST00000436427 RASA1P20936 1047 aa25.17■■□□□ 1.62
YBX1-203ENST00000436427 ANKRD1Q15327 319 aa25.17■■□□□ 1.62
YBX1-203ENST00000436427 EAPPQ56P03 285 aaPredicted RBP25.17■■□□□ 1.62
YBX1-203ENST00000436427 ZKSCAN3Q9BRR0 538 aa25.17■■□□□ 1.62
YBX1-203ENST00000436427 MCM2P49736 904 aa25.16■■□□□ 1.62
YBX1-203ENST00000436427 DCPSQ96C86 337 aaKnown RBP25.16■■□□□ 1.62
YBX1-203ENST00000436427 LARP6Q9BRS8 491 aaKnown RBP25.16■■□□□ 1.62
YBX1-203ENST00000436427 UBAC1Q9BSL1 405 aa25.16■■□□□ 1.62
YBX1-203ENST00000436427 PITPNM2Q9BZ72 1349 aa25.16■■□□□ 1.62
YBX1-203ENST00000436427 ALDH8A1Q9H2A2 487 aaPredicted RBP25.16■■□□□ 1.62
YBX1-203ENST00000436427 DNAJC18Q9H819 358 aa25.16■■□□□ 1.62
YBX1-203ENST00000436427 DAXXQ9UER7 740 aaPredicted RBP25.16■■□□□ 1.62
YBX1-203ENST00000436427 TSPY3P0CV98 308 aa25.15■■□□□ 1.62
YBX1-203ENST00000436427 TSPY8P0CW00 308 aa25.15■■□□□ 1.62
YBX1-203ENST00000436427 SHMT1P34896 483 aa25.15■■□□□ 1.62
YBX1-203ENST00000436427 NT5C2P49902 561 aa25.15■■□□□ 1.62
YBX1-203ENST00000436427 TFAP4Q01664 338 aa25.15■■□□□ 1.62
YBX1-203ENST00000436427 TOB2Q14106 344 aaPredicted RBP25.15■■□□□ 1.62
YBX1-203ENST00000436427 SART3Q15020 963 aaKnown RBP25.15■■□□□ 1.62
YBX1-203ENST00000436427 BRF1Q92994 677 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms