RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 PPP1R37O75864 691 aa9.57□□□□□ -0.88
VPS50-203ENST00000436177 FMNL1O95466 1100 aaPredicted RBP9.57□□□□□ -0.88
VPS50-203ENST00000436177 ADORA1P30542 326 aa9.57□□□□□ -0.88
VPS50-203ENST00000436177 RGS3P49796 1198 aa9.57□□□□□ -0.88
VPS50-203ENST00000436177 GSTO1P78417 241 aa9.57□□□□□ -0.88
VPS50-203ENST00000436177 OS9Q13438 667 aaPredicted RBP9.57□□□□□ -0.88
VPS50-203ENST00000436177 PICALMQ13492 652 aa9.57□□□□□ -0.88
VPS50-203ENST00000436177 NOL9Q5SY16 702 aaKnown RBP9.57□□□□□ -0.88
VPS50-203ENST00000436177 RAET1EQ8TD07 263 aa9.57□□□□□ -0.88
VPS50-203ENST00000436177 ARHGAP45Q92619 1136 aa9.57□□□□□ -0.88
VPS50-203ENST00000436177 ZNF333Q96JL9 665 aa9.57□□□□□ -0.88
VPS50-203ENST00000436177 NEUROD6Q96NK8 337 aa9.57□□□□□ -0.88
VPS50-203ENST00000436177 NOL10Q9BSC4 688 aaKnown RBP9.57□□□□□ -0.88
VPS50-203ENST00000436177 BIN2Q9UBW5 565 aaPredicted RBP9.57□□□□□ -0.88
VPS50-203ENST00000436177 CPA4Q9UI42 421 aa9.57□□□□□ -0.88
VPS50-203ENST00000436177 CEP290O15078 2479 aa9.57□□□□□ -0.88
VPS50-203ENST00000436177 A0A1B0GUL7 405 aa9.56□□□□□ -0.88
VPS50-203ENST00000436177 GNAI2P04899 355 aa9.56□□□□□ -0.88
VPS50-203ENST00000436177 LDHCP07864 332 aa9.56□□□□□ -0.88
VPS50-203ENST00000436177 BTDP43251 543 aa9.56□□□□□ -0.88
VPS50-203ENST00000436177 TFCP2Q12800 502 aa9.56□□□□□ -0.88
VPS50-203ENST00000436177 G3BP1Q13283 466 aaKnown RBP eCLIP9.56□□□□□ -0.88
VPS50-203ENST00000436177 GADL1Q6ZQY3 521 aa9.56□□□□□ -0.88
VPS50-203ENST00000436177 ERICH6Q7L0X2 663 aa9.56□□□□□ -0.88
VPS50-203ENST00000436177 FASTKD5Q7L8L6 764 aaKnown RBP9.56□□□□□ -0.88
VPS50-203ENST00000436177 TRMT2AQ8IZ69 625 aaKnown RBP9.56□□□□□ -0.88
VPS50-203ENST00000436177 SCYL3Q8IZE3 742 aa9.56□□□□□ -0.88
VPS50-203ENST00000436177 SMCR8Q8TEV9 937 aaPredicted RBP9.56□□□□□ -0.88
VPS50-203ENST00000436177 XAGE2Q96GT9 111 aa9.56□□□□□ -0.88
VPS50-203ENST00000436177 FAM198AQ9UFP1 575 aa9.56□□□□□ -0.88
VPS50-203ENST00000436177 ZNF112Q9UJU3 913 aa9.56□□□□□ -0.88
VPS50-203ENST00000436177 KCNH4Q9UQ05 1017 aa9.56□□□□□ -0.88
VPS50-203ENST00000436177 PCDHGA4Q9Y5G9 962 aa9.56□□□□□ -0.88
VPS50-203ENST00000436177 ZHX2Q9Y6X8 837 aa9.56□□□□□ -0.88
VPS50-203ENST00000436177 MROH7-TTC4A0A0A0MT08 1334 aa9.56□□□□□ -0.88
VPS50-203ENST00000436177 GAKO14976 1311 aa9.56□□□□□ -0.88
VPS50-203ENST00000436177 CXCL11O14625 94 aa9.55□□□□□ -0.88
VPS50-203ENST00000436177 EN2P19622 333 aaPredicted RBP9.55□□□□□ -0.88
VPS50-203ENST00000436177 PSMC4P43686 418 aa9.55□□□□□ -0.88
VPS50-203ENST00000436177 FCGRTP55899 365 aa9.55□□□□□ -0.88
VPS50-203ENST00000436177 TIMM10P62072 90 aa9.55□□□□□ -0.88
VPS50-203ENST00000436177 SH3TC2Q8TF17 1288 aa9.55□□□□□ -0.88
VPS50-203ENST00000436177 IDI2Q9BXS1 227 aa9.55□□□□□ -0.88
VPS50-203ENST00000436177 ARHGAP39Q9C0H5 1083 aa9.55□□□□□ -0.88
VPS50-203ENST00000436177 RAI14Q9P0K7 980 aa9.55□□□□□ -0.88
VPS50-203ENST00000436177 LRP2BPQ9P2M1 347 aa9.55□□□□□ -0.88
VPS50-203ENST00000436177 UQCRFS1P1P0C7P4 283 aa9.54□□□□□ -0.88
VPS50-203ENST00000436177 TRIM27P14373 513 aa9.54□□□□□ -0.88
VPS50-203ENST00000436177 UBXN2AP68543 259 aa9.54□□□□□ -0.88
VPS50-203ENST00000436177 MECOMQ03112 1051 aa9.54□□□□□ -0.88
VPS50-203ENST00000436177 MTX1Q13505 466 aa9.54□□□□□ -0.88
VPS50-203ENST00000436177 ATF7IPQ6VMQ6 1270 aa9.54□□□□□ -0.88
VPS50-203ENST00000436177 FTSJ3Q8IY81 847 aaKnown RBP9.54□□□□□ -0.88
VPS50-203ENST00000436177 SPATA5Q8NB90 893 aa9.54□□□□□ -0.88
VPS50-203ENST00000436177 CLUAP1Q96AJ1 413 aa9.54□□□□□ -0.88
VPS50-203ENST00000436177 TRIM47Q96LD4 638 aa9.54□□□□□ -0.88
VPS50-203ENST00000436177 TRIM34Q9BYJ4 488 aa9.54□□□□□ -0.88
VPS50-203ENST00000436177 SRRDQ9UH36 339 aa9.54□□□□□ -0.88
VPS50-203ENST00000436177 LAMB1P07942 1786 aa9.54□□□□□ -0.88
VPS50-203ENST00000436177 MYPNQ86TC9 1320 aa9.54□□□□□ -0.88
VPS50-203ENST00000436177 TRIM75PA6NK02 468 aa9.53□□□□□ -0.88
VPS50-203ENST00000436177 CTNND1O60716 968 aaKnown RBP9.53□□□□□ -0.88
VPS50-203ENST00000436177 MAP4K4O95819 1239 aaPredicted RBP9.53□□□□□ -0.88
VPS50-203ENST00000436177 PTPRAP18433 802 aa9.53□□□□□ -0.88
VPS50-203ENST00000436177 GRK4P32298 578 aa9.53□□□□□ -0.88
VPS50-203ENST00000436177 C17orf99Q6UX52 265 aa9.53□□□□□ -0.88
VPS50-203ENST00000436177 ZFPM1Q8IX07 1006 aa9.53□□□□□ -0.88
VPS50-203ENST00000436177 NKX2-3Q8TAU0 364 aa9.53□□□□□ -0.88
VPS50-203ENST00000436177 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.53□□□□□ -0.88
VPS50-203ENST00000436177 PNMA3Q9UL41 463 aa9.53□□□□□ -0.88
VPS50-203ENST00000436177 MYH13Q9UKX3 1938 aa9.52□□□□□ -0.88
VPS50-203ENST00000436177 A0A0G2JLL6 359 aaPredicted RBP9.52□□□□□ -0.89
VPS50-203ENST00000436177 BAG3O95817 575 aa9.52□□□□□ -0.89
VPS50-203ENST00000436177 CYP2C8P10632 490 aa9.52□□□□□ -0.89
VPS50-203ENST00000436177 OSBPP22059 807 aa9.52□□□□□ -0.89
VPS50-203ENST00000436177 CAP1Q01518 475 aa9.52□□□□□ -0.89
VPS50-203ENST00000436177 PABPC4Q13310 644 aaKnown RBP eCLIP9.52□□□□□ -0.89
VPS50-203ENST00000436177 CCDC158Q5M9N0 1113 aa9.52□□□□□ -0.89
VPS50-203ENST00000436177 TTC39AQ5SRH9 613 aa9.52□□□□□ -0.89
VPS50-203ENST00000436177 ZKSCAN2Q63HK3 967 aa9.52□□□□□ -0.89
VPS50-203ENST00000436177 POTEEQ6S8J3 1075 aa9.52□□□□□ -0.89
VPS50-203ENST00000436177 PRRT2Q7Z6L0 340 aaPredicted RBP9.52□□□□□ -0.89
VPS50-203ENST00000436177 TEX11Q8IYF3 940 aa9.52□□□□□ -0.89
VPS50-203ENST00000436177 HMG20BQ9P0W2 317 aa9.52□□□□□ -0.89
VPS50-203ENST00000436177 RFX7Q2KHR2 1363 aa9.51□□□□□ -0.89
VPS50-203ENST00000436177 ATRNL1Q5VV63 1379 aa9.51□□□□□ -0.89
VPS50-203ENST00000436177 GPR75-ASB3A0A0A6YYF3 556 aa9.51□□□□□ -0.89
VPS50-203ENST00000436177 DDTLA6NHG4 134 aaPredicted RBP9.51□□□□□ -0.89
VPS50-203ENST00000436177 PHF20L1A8MW92 1017 aa9.51□□□□□ -0.89
VPS50-203ENST00000436177 TNPO2O14787 897 aaKnown RBP9.51□□□□□ -0.89
VPS50-203ENST00000436177 PRKCZQ05513 592 aa9.51□□□□□ -0.89
VPS50-203ENST00000436177 NAA16Q6N069 864 aaPredicted RBP9.51□□□□□ -0.89
VPS50-203ENST00000436177 PI16Q6UXB8 463 aa9.51□□□□□ -0.89
VPS50-203ENST00000436177 TBC1D9Q6ZT07 1266 aa9.51□□□□□ -0.89
VPS50-203ENST00000436177 COA7Q96BR5 231 aa9.51□□□□□ -0.89
VPS50-203ENST00000436177 RNF208Q9H0X6 261 aa9.51□□□□□ -0.89
VPS50-203ENST00000436177 DDX4Q9NQI0 724 aaKnown RBP9.51□□□□□ -0.89
VPS50-203ENST00000436177 SLC45A1Q9Y2W3 748 aa9.51□□□□□ -0.89
VPS50-203ENST00000436177 ADGRA2Q96PE1 1338 aa9.51□□□□□ -0.89
VPS50-203ENST00000436177 AK9Q5TCS8 1911 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms