RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 EGFL7Q9UHF1 273 aa13.36□□□□□ -0.27
LINC01090-202ENST00000434418 NSFL1CQ9UNZ2 370 aaKnown RBP13.36□□□□□ -0.27
LINC01090-202ENST00000434418 EPB42P16452 691 aa13.35□□□□□ -0.27
LINC01090-202ENST00000434418 MAP2K3P46734 347 aa13.35□□□□□ -0.27
LINC01090-202ENST00000434418 PCBP4P57723 403 aaKnown RBP13.35□□□□□ -0.27
LINC01090-202ENST00000434418 AKAP4Q5JQC9 854 aa13.35□□□□□ -0.27
LINC01090-202ENST00000434418 CMTR1Q8N1G2 835 aaKnown RBP13.35□□□□□ -0.27
LINC01090-202ENST00000434418 LGR6Q9HBX8 967 aa13.35□□□□□ -0.27
LINC01090-202ENST00000434418 GNEQ9Y223 722 aaKnown RBP13.35□□□□□ -0.27
LINC01090-202ENST00000434418 COL3A1P02461 1466 aaPredicted RBP13.35□□□□□ -0.27
LINC01090-202ENST00000434418 MRC1P22897 1456 aa13.35□□□□□ -0.27
LINC01090-202ENST00000434418 KIAA1551Q9HCM1 1747 aa13.34□□□□□ -0.27
LINC01090-202ENST00000434418 DIAPH1O60610 1272 aaKnown RBP13.34□□□□□ -0.27
LINC01090-202ENST00000434418 CRKLP46109 303 aaKnown RBP13.34□□□□□ -0.27
LINC01090-202ENST00000434418 TRIP4Q15650 581 aaPredicted RBP13.34□□□□□ -0.27
LINC01090-202ENST00000434418 NOM1Q5C9Z4 860 aaKnown RBP13.34□□□□□ -0.27
LINC01090-202ENST00000434418 KLF15Q9UIH9 416 aa13.34□□□□□ -0.27
LINC01090-202ENST00000434418 PRR12Q9ULL5 1215 aa13.34□□□□□ -0.27
LINC01090-202ENST00000434418 KCNMB2Q9Y691 235 aa13.34□□□□□ -0.27
LINC01090-202ENST00000434418 N4BP2Q86UW6 1770 aaPredicted RBP13.34□□□□□ -0.27
LINC01090-202ENST00000434418 RPS6KA4O75676 772 aa13.33□□□□□ -0.28
LINC01090-202ENST00000434418 GYS1P13807 737 aa13.33□□□□□ -0.28
LINC01090-202ENST00000434418 NPR3P17342 541 aa13.33□□□□□ -0.28
LINC01090-202ENST00000434418 RFC4P35249 363 aa13.33□□□□□ -0.28
LINC01090-202ENST00000434418 KCNA1Q09470 495 aa13.33□□□□□ -0.28
LINC01090-202ENST00000434418 MTHFSDQ2M296 383 aaKnown RBP13.33□□□□□ -0.28
LINC01090-202ENST00000434418 LYPD4Q6UWN0 246 aa13.33□□□□□ -0.28
LINC01090-202ENST00000434418 GLYCTKQ8IVS8 523 aa13.33□□□□□ -0.28
LINC01090-202ENST00000434418 OXCT2Q9BYC2 517 aaPredicted RBP13.33□□□□□ -0.28
LINC01090-202ENST00000434418 GSX2Q9BZM3 304 aa13.33□□□□□ -0.28
LINC01090-202ENST00000434418 KIF13BQ9NQT8 1826 aa13.33□□□□□ -0.28
LINC01090-202ENST00000434418 PXDNLA1KZ92 1463 aa13.33□□□□□ -0.28
LINC01090-202ENST00000434418 ADAMTS7Q9UKP4 1686 aa13.32□□□□□ -0.28
LINC01090-202ENST00000434418 U2SURPO15042 1029 aaKnown RBP13.32□□□□□ -0.28
LINC01090-202ENST00000434418 SLC39A6Q13433 755 aa13.32□□□□□ -0.28
LINC01090-202ENST00000434418 ECM1Q16610 540 aa13.32□□□□□ -0.28
LINC01090-202ENST00000434418 ZNF468Q5VIY5 522 aaPredicted RBP13.32□□□□□ -0.28
LINC01090-202ENST00000434418 KRT25Q7Z3Z0 450 aa13.32□□□□□ -0.28
LINC01090-202ENST00000434418 HOMEZQ8IX15 550 aa13.32□□□□□ -0.28
LINC01090-202ENST00000434418 SLC52A2Q9HAB3 445 aa13.32□□□□□ -0.28
LINC01090-202ENST00000434418 SRP68Q9UHB9 627 aaKnown RBP13.32□□□□□ -0.28
LINC01090-202ENST00000434418 GGA1Q9UJY5 639 aa13.32□□□□□ -0.28
LINC01090-202ENST00000434418 C10orf71Q711Q0 1435 aa13.31□□□□□ -0.28
LINC01090-202ENST00000434418 ATP10DQ9P241 1426 aa13.31□□□□□ -0.28
LINC01090-202ENST00000434418 KCPQ6ZWJ8 1503 aa13.31□□□□□ -0.28
LINC01090-202ENST00000434418 NEURL1BA8MQ27 555 aa13.31□□□□□ -0.28
LINC01090-202ENST00000434418 RNMTO43148 476 aaKnown RBP13.31□□□□□ -0.28
LINC01090-202ENST00000434418 C1QTNF8P60827 252 aa13.31□□□□□ -0.28
LINC01090-202ENST00000434418 ZNF385CQ66K41 422 aaPredicted RBP13.31□□□□□ -0.28
LINC01090-202ENST00000434418 C1orf229Q6ZS94 237 aaPredicted RBP13.31□□□□□ -0.28
LINC01090-202ENST00000434418 SYT9Q86SS6 491 aa13.31□□□□□ -0.28
LINC01090-202ENST00000434418 DNAJC10Q8IXB1 793 aa13.31□□□□□ -0.28
LINC01090-202ENST00000434418 NLGN1Q8N2Q7 840 aa13.31□□□□□ -0.28
LINC01090-202ENST00000434418 EDEM1Q92611 657 aa13.31□□□□□ -0.28
LINC01090-202ENST00000434418 BHMTQ93088 406 aa13.31□□□□□ -0.28
LINC01090-202ENST00000434418 NPC1L1Q9UHC9 1359 aa13.31□□□□□ -0.28
LINC01090-202ENST00000434418 FAM13AO94988 1023 aa13.3□□□□□ -0.28
LINC01090-202ENST00000434418 ARAFP10398 606 aa13.3□□□□□ -0.28
LINC01090-202ENST00000434418 DNM1Q05193 864 aaKnown RBP13.3□□□□□ -0.28
LINC01090-202ENST00000434418 INTS5Q6P9B9 1019 aaKnown RBP13.3□□□□□ -0.28
LINC01090-202ENST00000434418 ZNF526Q8TF50 670 aaPredicted RBP13.3□□□□□ -0.28
LINC01090-202ENST00000434418 A0A0G2JLW4 131 aa13.29□□□□□ -0.28
LINC01090-202ENST00000434418 SOWAHDA6NJG2 315 aa13.29□□□□□ -0.28
LINC01090-202ENST00000434418 XYLBO75191 536 aa13.29□□□□□ -0.28
LINC01090-202ENST00000434418 CELA2BP08218 269 aaPredicted RBP13.29□□□□□ -0.28
LINC01090-202ENST00000434418 NFKB1P19838 968 aa13.29□□□□□ -0.28
LINC01090-202ENST00000434418 CCINQ13939 588 aa13.29□□□□□ -0.28
LINC01090-202ENST00000434418 FCHSD1Q86WN1 690 aa13.29□□□□□ -0.28
LINC01090-202ENST00000434418 USP42Q9H9J4 1324 aaKnown RBP13.29□□□□□ -0.28
LINC01090-202ENST00000434418 UBR2Q8IWV8 1755 aa13.29□□□□□ -0.28
LINC01090-202ENST00000434418 SASH3O75995 380 aa13.28□□□□□ -0.28
LINC01090-202ENST00000434418 ZSCAN1Q8NBB4 408 aa13.28□□□□□ -0.28
LINC01090-202ENST00000434418 PIK3R5Q8WYR1 880 aa13.28□□□□□ -0.28
LINC01090-202ENST00000434418 CCDC87Q9NVE4 849 aa13.28□□□□□ -0.28
LINC01090-202ENST00000434418 ZFATQ9P243 1243 aa13.28□□□□□ -0.28
LINC01090-202ENST00000434418 ADCY9O60503 1353 aa13.28□□□□□ -0.28
LINC01090-202ENST00000434418 FZD6O60353 706 aa13.27□□□□□ -0.29
LINC01090-202ENST00000434418 DPEP1P16444 411 aa13.27□□□□□ -0.29
LINC01090-202ENST00000434418 TARSP26639 723 aaKnown RBP13.27□□□□□ -0.29
LINC01090-202ENST00000434418 ARHGAP4P98171 946 aa13.27□□□□□ -0.29
LINC01090-202ENST00000434418 DDR1Q08345 913 aa13.27□□□□□ -0.29
LINC01090-202ENST00000434418 AAMPQ13685 434 aa13.27□□□□□ -0.29
LINC01090-202ENST00000434418 SVOPQ8N4V2 548 aa13.27□□□□□ -0.29
LINC01090-202ENST00000434418 POLIQ9UNA4 740 aa13.27□□□□□ -0.29
LINC01090-202ENST00000434418 BRCA1P38398 1863 aaKnown RBP13.27□□□□□ -0.29
LINC01090-202ENST00000434418 A6NHS1 94 aa13.26□□□□□ -0.29
LINC01090-202ENST00000434418 SIPA1L3O60292 1781 aaPredicted RBP13.26□□□□□ -0.29
LINC01090-202ENST00000434418 PDGFAP04085 211 aa13.26□□□□□ -0.29
LINC01090-202ENST00000434418 CYP19A1P11511 503 aaPredicted RBP13.26□□□□□ -0.29
LINC01090-202ENST00000434418 ADH6P28332 368 aa13.26□□□□□ -0.29
LINC01090-202ENST00000434418 INSM1Q01101 510 aaPredicted RBP13.26□□□□□ -0.29
LINC01090-202ENST00000434418 SOS1Q07889 1333 aaPredicted RBP13.26□□□□□ -0.29
LINC01090-202ENST00000434418 GOLGA6L1Q8N7Z2 621 aa13.26□□□□□ -0.29
LINC01090-202ENST00000434418 PNMA5Q96PV4 448 aa13.26□□□□□ -0.29
LINC01090-202ENST00000434418 FAM13BQ9NYF5 915 aa13.26□□□□□ -0.29
LINC01090-202ENST00000434418 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.26□□□□□ -0.29
LINC01090-202ENST00000434418 COL15A1P39059 1388 aa13.25□□□□□ -0.29
LINC01090-202ENST00000434418 TGFB2P61812 414 aa13.25□□□□□ -0.29
LINC01090-202ENST00000434418 USPL1Q5W0Q7 1092 aa13.25□□□□□ -0.29
LINC01090-202ENST00000434418 ALKBH2Q6NS38 261 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms