RNA–Protein interactions for RNA: ENST00000430710.7

CHD8-202, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD8, Length 7,420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-202ENST00000430710 SNRKQ9NRH2 765 aa6.9□□□□□ -1.3
CHD8-202ENST00000430710 ODF2LQ9ULJ1 636 aa6.9□□□□□ -1.3
CHD8-202ENST00000430710 RBM6P78332 1123 aaKnown RBP6.9□□□□□ -1.31
CHD8-202ENST00000430710 POSTNQ15063 836 aa6.9□□□□□ -1.31
CHD8-202ENST00000430710 KRT71Q3SY84 523 aa6.9□□□□□ -1.31
CHD8-202ENST00000430710 TEX13AQ9BXU3 409 aaPredicted RBP6.9□□□□□ -1.31
CHD8-202ENST00000430710 PDE11AQ9HCR9 933 aa6.9□□□□□ -1.31
CHD8-202ENST00000430710 HELLSQ9NRZ9 838 aa6.9□□□□□ -1.31
CHD8-202ENST00000430710 ADGRF5Q8IZF2 1346 aa6.9□□□□□ -1.31
CHD8-202ENST00000430710 SGSM2O43147 1006 aa6.9□□□□□ -1.31
CHD8-202ENST00000430710 BAG3O95817 575 aa6.9□□□□□ -1.31
CHD8-202ENST00000430710 IL15P40933 162 aaPredicted RBP6.9□□□□□ -1.31
CHD8-202ENST00000430710 R3HDM1Q15032 1099 aaKnown RBP6.9□□□□□ -1.31
CHD8-202ENST00000430710 PHLDB3Q6NSJ2 640 aa6.9□□□□□ -1.31
CHD8-202ENST00000430710 DPY19L2Q6NUT2 758 aa6.9□□□□□ -1.31
CHD8-202ENST00000430710 CRNKL1Q9BZJ0 848 aaKnown RBP6.9□□□□□ -1.31
CHD8-202ENST00000430710 NUCKS1Q9H1E3 243 aaKnown RBP6.9□□□□□ -1.31
CHD8-202ENST00000430710 FAM114A2Q9NRY5 505 aa6.9□□□□□ -1.31
CHD8-202ENST00000430710 KIAA1468Q9P260 1216 aa6.9□□□□□ -1.31
CHD8-202ENST00000430710 PPP2R2CQ9Y2T4 447 aa6.9□□□□□ -1.31
CHD8-202ENST00000430710 TCOF1Q13428 1488 aaKnown RBP6.89□□□□□ -1.31
CHD8-202ENST00000430710 RIMBP2O15034 1052 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 CCT5P48643 541 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 LRRC59Q96AG4 307 aaKnown RBP6.89□□□□□ -1.31
CHD8-202ENST00000430710 NOS1P29475 1434 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 WASLO00401 505 aaPredicted RBP6.89□□□□□ -1.31
CHD8-202ENST00000430710 RPL13P26373 211 aaKnown RBP6.89□□□□□ -1.31
CHD8-202ENST00000430710 PEX19P40855 299 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 MAGEA9P43362 315 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 CCDC14Q49A88 953 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 RPUSD2Q8IZ73 545 aaKnown RBP6.89□□□□□ -1.31
CHD8-202ENST00000430710 ADGBQ8N7X0 1667 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 CCDC151A5D8V7 595 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 PLCD1P51178 756 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 PLS1Q14651 629 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 KRT79Q5XKE5 535 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 SEPT14Q6ZU15 432 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 CDC37L1Q7L3B6 337 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 FAM204AQ9H8W3 233 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 BCAP29Q9UHQ4 241 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 DDX41Q9UJV9 622 aaKnown RBP6.89□□□□□ -1.31
CHD8-202ENST00000430710 TERF2Q15554 542 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 ZKSCAN8Q15776 578 aaPredicted RBP6.89□□□□□ -1.31
CHD8-202ENST00000430710 MAP3K21Q5TCX8 1036 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 SRGAP1Q7Z6B7 1085 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 ZBTB3Q9H5J0 574 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 HOMER3Q9NSC5 361 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 ASIC2Q16515 512 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 ICE2Q659A1 982 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 HS2ST1Q7LGA3 356 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 CCDC97Q96F63 343 aaPredicted RBP6.89□□□□□ -1.31
CHD8-202ENST00000430710 PYCARDQ9ULZ3 195 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 FAN1Q9Y2M0 1017 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 PER1O15534 1290 aaPredicted RBP6.89□□□□□ -1.31
CHD8-202ENST00000430710 RNF113AO15541 343 aaKnown RBP6.89□□□□□ -1.31
CHD8-202ENST00000430710 NR1I2O75469 434 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 EEF2P13639 858 aaKnown RBP6.89□□□□□ -1.31
CHD8-202ENST00000430710 PLCB3Q01970 1234 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 ADALQ6DHV7 355 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 CCDC65Q8IXS2 484 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 PPP1R13BQ96KQ4 1090 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 NUF2Q9BZD4 464 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 SYNCQ9H7C4 482 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 CHPF2Q9P2E5 772 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 STK38LQ9Y2H1 464 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 COMMD10Q9Y6G5 202 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 AK9Q5TCS8 1911 aa6.89□□□□□ -1.31
CHD8-202ENST00000430710 MCM7P33993 719 aa6.88□□□□□ -1.31
CHD8-202ENST00000430710 KSR2Q6VAB6 950 aa6.88□□□□□ -1.31
CHD8-202ENST00000430710 ANKRD13DQ6ZTN6 518 aa6.88□□□□□ -1.31
CHD8-202ENST00000430710 HEATR3Q7Z4Q2 680 aa6.88□□□□□ -1.31
CHD8-202ENST00000430710 KLHL14Q9P2G3 628 aa6.88□□□□□ -1.31
CHD8-202ENST00000430710 DUOX2Q9NRD8 1548 aa6.88□□□□□ -1.31
CHD8-202ENST00000430710 RGS16O15492 202 aaPredicted RBP6.88□□□□□ -1.31
CHD8-202ENST00000430710 HOXB7P09629 217 aa6.88□□□□□ -1.31
CHD8-202ENST00000430710 SDCCAG8Q86SQ7 713 aaPredicted RBP6.88□□□□□ -1.31
CHD8-202ENST00000430710 ANTXR1Q9H6X2 564 aa6.88□□□□□ -1.31
CHD8-202ENST00000430710 VAT1LQ9HCJ6 419 aa6.88□□□□□ -1.31
CHD8-202ENST00000430710 C6orf50Q9HD87 102 aa6.88□□□□□ -1.31
CHD8-202ENST00000430710 VWA3AA6NCI4 1184 aa6.88□□□□□ -1.31
CHD8-202ENST00000430710 MAGEA1P43355 309 aa6.88□□□□□ -1.31
CHD8-202ENST00000430710 ZBTB17Q13105 803 aa6.88□□□□□ -1.31
CHD8-202ENST00000430710 TRPC3Q13507 836 aa6.88□□□□□ -1.31
CHD8-202ENST00000430710 RPS6KA1Q15418 735 aa6.88□□□□□ -1.31
CHD8-202ENST00000430710 TRIM68Q6AZZ1 485 aa6.88□□□□□ -1.31
CHD8-202ENST00000430710 CHST3Q7LGC8 479 aa6.88□□□□□ -1.31
CHD8-202ENST00000430710 CCDC84Q86UT8 332 aaPredicted RBP6.88□□□□□ -1.31
CHD8-202ENST00000430710 CCDC170Q8IYT3 715 aa6.88□□□□□ -1.31
CHD8-202ENST00000430710 IFNL2Q8IZJ0 200 aa6.88□□□□□ -1.31
CHD8-202ENST00000430710 STAG1Q8WVM7 1258 aa6.88□□□□□ -1.31
CHD8-202ENST00000430710 SLF1Q9BQI6 1058 aa6.88□□□□□ -1.31
CHD8-202ENST00000430710 TACO1Q9BSH4 297 aaKnown RBP6.88□□□□□ -1.31
CHD8-202ENST00000430710 SUDS3Q9H7L9 328 aaPredicted RBP6.88□□□□□ -1.31
CHD8-202ENST00000430710 GPBP1L1Q9HC44 474 aaPredicted RBP6.88□□□□□ -1.31
CHD8-202ENST00000430710 DDX21Q9NR30 783 aaKnown RBP eCLIP6.88□□□□□ -1.31
CHD8-202ENST00000430710 MYO1AQ9UBC5 1043 aa6.88□□□□□ -1.31
CHD8-202ENST00000430710 RAPGEF6Q8TEU7 1601 aa6.88□□□□□ -1.31
CHD8-202ENST00000430710 ERCC5P28715 1186 aaPredicted RBP6.88□□□□□ -1.31
CHD8-202ENST00000430710 MCTP2Q6DN12 878 aa6.88□□□□□ -1.31
CHD8-202ENST00000430710 TRMT1LQ7Z2T5 733 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms