RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 SH3RF3Q8TEJ3 882 aaPredicted RBP11.1□□□□□ -0.63
HDAC9-211ENST00000430454 TMEM106CQ9BVX2 250 aa11.1□□□□□ -0.63
HDAC9-211ENST00000430454 DDX4Q9NQI0 724 aaKnown RBP11.1□□□□□ -0.63
HDAC9-211ENST00000430454 USP5P45974 858 aa11.09□□□□□ -0.63
HDAC9-211ENST00000430454 LACTBP83111 547 aaPredicted RBP11.09□□□□□ -0.63
HDAC9-211ENST00000430454 SLC9C1Q4G0N8 1177 aa11.09□□□□□ -0.63
HDAC9-211ENST00000430454 GADL1Q6ZQY3 521 aa11.09□□□□□ -0.63
HDAC9-211ENST00000430454 SH3BP5LQ7L8J4 393 aa11.09□□□□□ -0.63
HDAC9-211ENST00000430454 SMCR8Q8TEV9 937 aaPredicted RBP11.09□□□□□ -0.63
HDAC9-211ENST00000430454 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.09□□□□□ -0.63
HDAC9-211ENST00000430454 TGFBRAP1Q8WUH2 860 aa11.09□□□□□ -0.63
HDAC9-211ENST00000430454 AFG3L2Q9Y4W6 797 aa11.09□□□□□ -0.63
HDAC9-211ENST00000430454 DOCK2Q92608 1830 aa11.09□□□□□ -0.63
HDAC9-211ENST00000430454 USP17L5A8MUK1 530 aa11.08□□□□□ -0.64
HDAC9-211ENST00000430454 FMNL1O95466 1100 aaPredicted RBP11.08□□□□□ -0.64
HDAC9-211ENST00000430454 ASNSP08243 561 aa11.08□□□□□ -0.64
HDAC9-211ENST00000430454 OSBPP22059 807 aa11.08□□□□□ -0.64
HDAC9-211ENST00000430454 CAP2P40123 477 aa11.08□□□□□ -0.64
HDAC9-211ENST00000430454 FCGRTP55899 365 aa11.08□□□□□ -0.64
HDAC9-211ENST00000430454 C17orf99Q6UX52 265 aa11.08□□□□□ -0.64
HDAC9-211ENST00000430454 TTC6Q86TZ1 520 aa11.08□□□□□ -0.64
HDAC9-211ENST00000430454 MAPKAPK5Q8IW41 473 aa11.08□□□□□ -0.64
HDAC9-211ENST00000430454 MAGEB6Q8N7X4 407 aa11.08□□□□□ -0.64
HDAC9-211ENST00000430454 PROCA1Q8NCQ7 364 aaPredicted RBP11.08□□□□□ -0.64
HDAC9-211ENST00000430454 ZNF280CQ8ND82 737 aa11.08□□□□□ -0.64
HDAC9-211ENST00000430454 ZNF384Q8TF68 577 aa11.08□□□□□ -0.64
HDAC9-211ENST00000430454 ARMC5Q96C12 935 aa11.08□□□□□ -0.64
HDAC9-211ENST00000430454 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.08□□□□□ -0.64
HDAC9-211ENST00000430454 IL1RAPL2Q9NP60 686 aa11.08□□□□□ -0.64
HDAC9-211ENST00000430454 PIH1D3Q9NQM4 214 aaKnown RBP11.08□□□□□ -0.64
HDAC9-211ENST00000430454 TRIM75PA6NK02 468 aa11.07□□□□□ -0.64
HDAC9-211ENST00000430454 APBB1O00213 710 aa11.07□□□□□ -0.64
HDAC9-211ENST00000430454 PSMC4P43686 418 aa11.07□□□□□ -0.64
HDAC9-211ENST00000430454 GPATCH3Q96I76 525 aa11.07□□□□□ -0.64
HDAC9-211ENST00000430454 TLR7Q9NYK1 1049 aaKnown RBP11.07□□□□□ -0.64
HDAC9-211ENST00000430454 TMOD4Q9NZQ9 345 aa11.07□□□□□ -0.64
HDAC9-211ENST00000430454 CPA4Q9UI42 421 aa11.07□□□□□ -0.64
HDAC9-211ENST00000430454 TAOK2Q9UL54 1235 aa11.07□□□□□ -0.64
HDAC9-211ENST00000430454 MAST2Q6P0Q8 1798 aa11.07□□□□□ -0.64
HDAC9-211ENST00000430454 FLT1P17948 1338 aa11.07□□□□□ -0.64
HDAC9-211ENST00000430454 MAGEB6P1A0A0J9YX57 407 aa11.06□□□□□ -0.64
HDAC9-211ENST00000430454 GCLCP48506 637 aaPredicted RBP11.06□□□□□ -0.64
HDAC9-211ENST00000430454 SPP2Q13103 211 aa11.06□□□□□ -0.64
HDAC9-211ENST00000430454 ZSCAN25Q6NSZ9 544 aa11.06□□□□□ -0.64
HDAC9-211ENST00000430454 GPAT2Q6NUI2 795 aa11.06□□□□□ -0.64
HDAC9-211ENST00000430454 AMOTL1Q8IY63 956 aa11.06□□□□□ -0.64
HDAC9-211ENST00000430454 RAET1EQ8TD07 263 aa11.06□□□□□ -0.64
HDAC9-211ENST00000430454 DDRGK1Q96HY6 314 aa11.06□□□□□ -0.64
HDAC9-211ENST00000430454 TRIM47Q96LD4 638 aa11.06□□□□□ -0.64
HDAC9-211ENST00000430454 WDR18Q9BV38 432 aa11.06□□□□□ -0.64
HDAC9-211ENST00000430454 CRNKL1Q9BZJ0 848 aaKnown RBP11.06□□□□□ -0.64
HDAC9-211ENST00000430454 LRRCC1Q9C099 1032 aa11.06□□□□□ -0.64
HDAC9-211ENST00000430454 AGTPBP1Q9UPW5 1226 aa11.06□□□□□ -0.64
HDAC9-211ENST00000430454 C19orf81C9J6K1 198 aa11.05□□□□□ -0.64
HDAC9-211ENST00000430454 CAPN2P17655 700 aa11.05□□□□□ -0.64
HDAC9-211ENST00000430454 MOGSQ13724 837 aa11.05□□□□□ -0.64
HDAC9-211ENST00000430454 SLC4A8Q2Y0W8 1093 aa11.05□□□□□ -0.64
HDAC9-211ENST00000430454 SLC9C2Q5TAH2 1124 aa11.05□□□□□ -0.64
HDAC9-211ENST00000430454 MIGA1Q8NAN2 632 aa11.05□□□□□ -0.64
HDAC9-211ENST00000430454 DNAJC2Q99543 621 aaKnown RBP11.05□□□□□ -0.64
HDAC9-211ENST00000430454 BCL11AQ9H165 835 aa11.05□□□□□ -0.64
HDAC9-211ENST00000430454 EHD4Q9H223 541 aa11.05□□□□□ -0.64
HDAC9-211ENST00000430454 PALD1Q9ULE6 856 aa11.05□□□□□ -0.64
HDAC9-211ENST00000430454 GOLIM4O00461 696 aa11.04□□□□□ -0.64
HDAC9-211ENST00000430454 POLR3DP05423 398 aaPredicted RBP11.04□□□□□ -0.64
HDAC9-211ENST00000430454 CYP2C8P10632 490 aa11.04□□□□□ -0.64
HDAC9-211ENST00000430454 ATP5JP18859 108 aa11.04□□□□□ -0.64
HDAC9-211ENST00000430454 UBXN2AP68543 259 aa11.04□□□□□ -0.64
HDAC9-211ENST00000430454 LRRFIP1Q32MZ4 808 aaKnown RBP11.04□□□□□ -0.64
HDAC9-211ENST00000430454 ADGRA1Q86SQ6 560 aa11.04□□□□□ -0.64
HDAC9-211ENST00000430454 METTL16Q86W50 562 aaKnown RBP11.04□□□□□ -0.64
HDAC9-211ENST00000430454 GTF3C2Q8WUA4 911 aaPredicted RBP11.04□□□□□ -0.64
HDAC9-211ENST00000430454 COA7Q96BR5 231 aa11.04□□□□□ -0.64
HDAC9-211ENST00000430454 CABP5Q9NP86 173 aa11.04□□□□□ -0.64
HDAC9-211ENST00000430454 PAG1Q9NWQ8 432 aa11.04□□□□□ -0.64
HDAC9-211ENST00000430454 BIN2Q9UBW5 565 aaPredicted RBP11.04□□□□□ -0.64
HDAC9-211ENST00000430454 ZBTB47Q9UFB7 747 aaPredicted RBP11.04□□□□□ -0.64
HDAC9-211ENST00000430454 SRRDQ9UH36 339 aa11.04□□□□□ -0.64
HDAC9-211ENST00000430454 SAP30BPQ9UHR5 308 aaKnown RBP11.04□□□□□ -0.64
HDAC9-211ENST00000430454 SERPINB13Q9UIV8 391 aa11.04□□□□□ -0.64
HDAC9-211ENST00000430454 PTCH2Q9Y6C5 1203 aa11.04□□□□□ -0.64
HDAC9-211ENST00000430454 MYPNQ86TC9 1320 aa11.04□□□□□ -0.64
HDAC9-211ENST00000430454 DOCK1Q14185 1865 aa11.04□□□□□ -0.64
HDAC9-211ENST00000430454 FAM196BA6NMK8 535 aa11.03□□□□□ -0.64
HDAC9-211ENST00000430454 USP17L10C9JJH3 530 aa11.03□□□□□ -0.64
HDAC9-211ENST00000430454 TNPO2O14787 897 aaKnown RBP11.03□□□□□ -0.64
HDAC9-211ENST00000430454 BCRP11274 1271 aa11.03□□□□□ -0.64
HDAC9-211ENST00000430454 PDE6AP16499 860 aa11.03□□□□□ -0.64
HDAC9-211ENST00000430454 BACE1P56817 501 aa11.03□□□□□ -0.64
HDAC9-211ENST00000430454 DYNLL1P63167 89 aaKnown RBP11.03□□□□□ -0.64
HDAC9-211ENST00000430454 IRX3P78415 501 aaPredicted RBP11.03□□□□□ -0.64
HDAC9-211ENST00000430454 SH3D19Q5HYK7 790 aa11.03□□□□□ -0.64
HDAC9-211ENST00000430454 SIRT2Q8IXJ6 389 aa11.03□□□□□ -0.64
HDAC9-211ENST00000430454 NKX2-3Q8TAU0 364 aa11.03□□□□□ -0.64
HDAC9-211ENST00000430454 ZNF333Q96JL9 665 aa11.03□□□□□ -0.64
HDAC9-211ENST00000430454 ADGRA2Q96PE1 1338 aa11.03□□□□□ -0.64
HDAC9-211ENST00000430454 GRK4P32298 578 aa11.02□□□□□ -0.65
HDAC9-211ENST00000430454 USP14P54578 494 aa11.02□□□□□ -0.65
HDAC9-211ENST00000430454 HMGCS2P54868 508 aa11.02□□□□□ -0.65
HDAC9-211ENST00000430454 FAM110CQ1W6H9 321 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms