RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 SEPT6Q14141 434 aa5.75□□□□□ -1.49
HMGB3-203ENST00000430118 IKBKEQ14164 716 aa5.75□□□□□ -1.49
HMGB3-203ENST00000430118 MLECQ14165 292 aa5.75□□□□□ -1.49
HMGB3-203ENST00000430118 PERM1Q5SV97 790 aa5.75□□□□□ -1.49
HMGB3-203ENST00000430118 RASIP1Q5U651 963 aa5.75□□□□□ -1.49
HMGB3-203ENST00000430118 HFE2Q6ZVN8 426 aa5.75□□□□□ -1.49
HMGB3-203ENST00000430118 ST13P5Q8NFI4 369 aaPredicted RBP5.75□□□□□ -1.49
HMGB3-203ENST00000430118 JARID2Q92833 1246 aaPredicted RBP5.75□□□□□ -1.49
HMGB3-203ENST00000430118 TMEM260Q9NX78 707 aa5.75□□□□□ -1.49
HMGB3-203ENST00000430118 NSFL1CQ9UNZ2 370 aaKnown RBP5.75□□□□□ -1.49
HMGB3-203ENST00000430118 NOP58Q9Y2X3 529 aaKnown RBP5.75□□□□□ -1.49
HMGB3-203ENST00000430118 SNCAIPQ9Y6H5 919 aa5.75□□□□□ -1.49
HMGB3-203ENST00000430118 STRCQ7RTU9 1775 aa5.75□□□□□ -1.49
HMGB3-203ENST00000430118 LTBP4Q8N2S1 1624 aa5.74□□□□□ -1.49
HMGB3-203ENST00000430118 RAPGEF6Q8TEU7 1601 aa5.74□□□□□ -1.49
HMGB3-203ENST00000430118 PPP1R12AO14974 1030 aaPredicted RBP5.74□□□□□ -1.49
HMGB3-203ENST00000430118 GSTP1P09211 210 aaKnown RBP5.74□□□□□ -1.49
HMGB3-203ENST00000430118 CDC27P30260 824 aa5.74□□□□□ -1.49
HMGB3-203ENST00000430118 ADH7P40394 386 aa5.74□□□□□ -1.49
HMGB3-203ENST00000430118 MAP2K3P46734 347 aa5.74□□□□□ -1.49
HMGB3-203ENST00000430118 CHMP4BP1P59074 171 aa5.74□□□□□ -1.49
HMGB3-203ENST00000430118 CLCQ05315 142 aa5.74□□□□□ -1.49
HMGB3-203ENST00000430118 GK5Q6ZS86 529 aa5.74□□□□□ -1.49
HMGB3-203ENST00000430118 SV2AQ7L0J3 742 aa5.74□□□□□ -1.49
HMGB3-203ENST00000430118 KIAA0907Q7Z7F0 614 aaPredicted RBP5.74□□□□□ -1.49
HMGB3-203ENST00000430118 CELF2-AS1Q8N7Q2 184 aa5.74□□□□□ -1.49
HMGB3-203ENST00000430118 SH3TC2Q8TF17 1288 aa5.74□□□□□ -1.49
HMGB3-203ENST00000430118 LPIN3Q9BQK8 851 aa5.74□□□□□ -1.49
HMGB3-203ENST00000430118 SMG9Q9H0W8 520 aaKnown RBP5.74□□□□□ -1.49
HMGB3-203ENST00000430118 CBX8Q9HC52 389 aa5.74□□□□□ -1.49
HMGB3-203ENST00000430118 METTL14Q9HCE5 456 aaKnown RBP5.74□□□□□ -1.49
HMGB3-203ENST00000430118 ATP10BO94823 1461 aa5.74□□□□□ -1.49
HMGB3-203ENST00000430118 SOBPA7XYQ1 873 aa5.73□□□□□ -1.49
HMGB3-203ENST00000430118 DNAJC6O75061 913 aa5.73□□□□□ -1.49
HMGB3-203ENST00000430118 CYP11A1P05108 521 aa5.73□□□□□ -1.49
HMGB3-203ENST00000430118 CPB1P15086 417 aa5.73□□□□□ -1.49
HMGB3-203ENST00000430118 ARL4DP49703 201 aa5.73□□□□□ -1.49
HMGB3-203ENST00000430118 ZNF157P51786 506 aaPredicted RBP5.73□□□□□ -1.49
HMGB3-203ENST00000430118 PIP4K2BP78356 416 aa5.73□□□□□ -1.49
HMGB3-203ENST00000430118 C2orf27AQ580R0 203 aa5.73□□□□□ -1.49
HMGB3-203ENST00000430118 HP1BP3Q5SSJ5 553 aaPredicted RBP5.73□□□□□ -1.49
HMGB3-203ENST00000430118 LCE2CQ5TA81 110 aa5.73□□□□□ -1.49
HMGB3-203ENST00000430118 FBXW10Q5XX13 1052 aa5.73□□□□□ -1.49
HMGB3-203ENST00000430118 INTS3Q68E01 1043 aaKnown RBP5.73□□□□□ -1.49
HMGB3-203ENST00000430118 ADAMTSL4Q6UY14 1074 aa5.73□□□□□ -1.49
HMGB3-203ENST00000430118 SLC16A10Q8TF71 515 aa5.73□□□□□ -1.49
HMGB3-203ENST00000430118 THAP3Q8WTV1 239 aaPredicted RBP5.73□□□□□ -1.49
HMGB3-203ENST00000430118 GPATCH3Q96I76 525 aa5.73□□□□□ -1.49
HMGB3-203ENST00000430118 IGFLR1Q9H665 355 aa5.73□□□□□ -1.49
HMGB3-203ENST00000430118 SPC25Q9HBM1 224 aa5.73□□□□□ -1.49
HMGB3-203ENST00000430118 OSGEPQ9NPF4 335 aa5.73□□□□□ -1.49
HMGB3-203ENST00000430118 STK17AQ9UEE5 414 aa5.73□□□□□ -1.49
HMGB3-203ENST00000430118 NAGPAQ9UK23 515 aa5.73□□□□□ -1.49
HMGB3-203ENST00000430118 PCDHB14Q9Y5E9 798 aa5.73□□□□□ -1.49
HMGB3-203ENST00000430118 HECW1Q76N89 1606 aa5.73□□□□□ -1.49
HMGB3-203ENST00000430118 ATP10AO60312 1499 aa5.72□□□□□ -1.49
HMGB3-203ENST00000430118 ELOA3CA0A087WX78 387 aaPredicted RBP5.72□□□□□ -1.49
HMGB3-203ENST00000430118 ELOA3DA6NLF2 546 aaPredicted RBP5.72□□□□□ -1.49
HMGB3-203ENST00000430118 MX2P20592 715 aa5.72□□□□□ -1.49
HMGB3-203ENST00000430118 GUCY2CP25092 1073 aa5.72□□□□□ -1.49
HMGB3-203ENST00000430118 ANAPC15P60006 121 aa5.72□□□□□ -1.49
HMGB3-203ENST00000430118 TBC1D8BQ0IIM8 1120 aa5.72□□□□□ -1.49
HMGB3-203ENST00000430118 LONRF2Q1L5Z9 754 aa5.72□□□□□ -1.49
HMGB3-203ENST00000430118 ELOA3BQ3SY89 546 aa5.72□□□□□ -1.49
HMGB3-203ENST00000430118 ZC3H12BQ5HYM0 836 aaKnown RBP5.72□□□□□ -1.49
HMGB3-203ENST00000430118 FAM117BQ6P1L5 589 aa5.72□□□□□ -1.49
HMGB3-203ENST00000430118 ELOA3Q8NG57 546 aa5.72□□□□□ -1.49
HMGB3-203ENST00000430118 STK35Q8TDR2 534 aa5.72□□□□□ -1.49
HMGB3-203ENST00000430118 TMEM40Q8WWA1 233 aa5.72□□□□□ -1.49
HMGB3-203ENST00000430118 DNAJC7Q99615 494 aa5.72□□□□□ -1.49
HMGB3-203ENST00000430118 FEZ1Q99689 392 aa5.72□□□□□ -1.49
HMGB3-203ENST00000430118 EPN3Q9H201 632 aa5.72□□□□□ -1.49
HMGB3-203ENST00000430118 FANCLQ9NW38 375 aa5.72□□□□□ -1.49
HMGB3-203ENST00000430118 NXF1Q9UBU9 619 aaKnown RBP5.72□□□□□ -1.49
HMGB3-203ENST00000430118 POLR3KQ9Y2Y1 108 aaPredicted RBP5.72□□□□□ -1.49
HMGB3-203ENST00000430118 NCOA1Q15788 1441 aa5.72□□□□□ -1.49
HMGB3-203ENST00000430118 CNTLNQ9NXG0 1405 aa5.72□□□□□ -1.49
HMGB3-203ENST00000430118 SYNGAP1Q96PV0 1343 aa5.72□□□□□ -1.49
HMGB3-203ENST00000430118 ZNF518AQ6AHZ1 1483 aa5.71□□□□□ -1.49
HMGB3-203ENST00000430118 PLEKHD1A6NEE1 506 aa5.71□□□□□ -1.5
HMGB3-203ENST00000430118 GFRA2O00451 464 aa5.71□□□□□ -1.5
HMGB3-203ENST00000430118 SOX1O00570 391 aaPredicted RBP5.71□□□□□ -1.5
HMGB3-203ENST00000430118 C2CD2LO14523 706 aa5.71□□□□□ -1.5
HMGB3-203ENST00000430118 PPFIA3O75145 1194 aa5.71□□□□□ -1.5
HMGB3-203ENST00000430118 EPHA1P21709 976 aa5.71□□□□□ -1.5
HMGB3-203ENST00000430118 PDE4BQ07343 736 aa5.71□□□□□ -1.5
HMGB3-203ENST00000430118 NCAPHQ15003 741 aa5.71□□□□□ -1.5
HMGB3-203ENST00000430118 MTERF2Q49AM1 385 aa5.71□□□□□ -1.5
HMGB3-203ENST00000430118 KANK3Q6NY19 840 aa5.71□□□□□ -1.5
HMGB3-203ENST00000430118 C16orf86Q6ZW13 317 aa5.71□□□□□ -1.5
HMGB3-203ENST00000430118 HDXQ7Z353 690 aa5.71□□□□□ -1.5
HMGB3-203ENST00000430118 LILRB2Q8N423 598 aa5.71□□□□□ -1.5
HMGB3-203ENST00000430118 GRIN3AQ8TCU5 1115 aa5.71□□□□□ -1.5
HMGB3-203ENST00000430118 NRSN2Q9GZP1 204 aa5.71□□□□□ -1.5
HMGB3-203ENST00000430118 GMIPQ9P107 970 aa5.71□□□□□ -1.5
HMGB3-203ENST00000430118 TRIM33Q9UPN9 1127 aa5.71□□□□□ -1.5
HMGB3-203ENST00000430118 COL4A3BPQ9Y5P4 624 aa5.71□□□□□ -1.5
HMGB3-203ENST00000430118 A0A1W2PQH9 124 aa5.7□□□□□ -1.5
HMGB3-203ENST00000430118 RGS9O75916 674 aaPredicted RBP5.7□□□□□ -1.5
HMGB3-203ENST00000430118 ALAS2P22557 587 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms