RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 DIP2CQ9Y2E4 1556 aa14.3□□□□□ -0.12
CPNE4-201ENST00000429747 PPLO60437 1756 aa14.3□□□□□ -0.12
CPNE4-201ENST00000429747 PHKA1P46020 1223 aa14.3□□□□□ -0.12
CPNE4-201ENST00000429747 ANKRD18AQ8IVF6 992 aa14.3□□□□□ -0.12
CPNE4-201ENST00000429747 SPATA5Q8NB90 893 aa14.3□□□□□ -0.12
CPNE4-201ENST00000429747 EHBP1Q8NDI1 1231 aa14.3□□□□□ -0.12
CPNE4-201ENST00000429747 LPIN2Q92539 896 aa14.3□□□□□ -0.12
CPNE4-201ENST00000429747 ACSBG1Q96GR2 724 aa14.3□□□□□ -0.12
CPNE4-201ENST00000429747 DDX41Q9UJV9 622 aaKnown RBP14.3□□□□□ -0.12
CPNE4-201ENST00000429747 USP32Q8NFA0 1604 aa14.29□□□□□ -0.12
CPNE4-201ENST00000429747 MAP2P11137 1827 aaKnown RBP14.29□□□□□ -0.12
CPNE4-201ENST00000429747 EFCAB8A8MWE9 144 aa14.29□□□□□ -0.12
CPNE4-201ENST00000429747 KRT86O43790 486 aa14.29□□□□□ -0.12
CPNE4-201ENST00000429747 IFNL3Q8IZI9 196 aa14.29□□□□□ -0.12
CPNE4-201ENST00000429747 SMARCC2Q8TAQ2 1214 aa14.29□□□□□ -0.12
CPNE4-201ENST00000429747 CALML4Q96GE6 196 aa14.29□□□□□ -0.12
CPNE4-201ENST00000429747 FUCA2Q9BTY2 467 aa14.29□□□□□ -0.12
CPNE4-201ENST00000429747 IKBKBO14920 756 aa14.29□□□□□ -0.12
CPNE4-201ENST00000429747 COBLO75128 1261 aa14.29□□□□□ -0.12
CPNE4-201ENST00000429747 KMT5BQ4FZB7 885 aa14.29□□□□□ -0.12
CPNE4-201ENST00000429747 GPR161Q8N6U8 529 aaKnown RBP14.29□□□□□ -0.12
CPNE4-201ENST00000429747 ALS2CR12Q96Q35 445 aa14.29□□□□□ -0.12
CPNE4-201ENST00000429747 MMRN2Q9H8L6 949 aa14.29□□□□□ -0.12
CPNE4-201ENST00000429747 CLCN6P51797 869 aa14.29□□□□□ -0.12
CPNE4-201ENST00000429747 CKAP4Q07065 602 aaKnown RBP14.29□□□□□ -0.12
CPNE4-201ENST00000429747 KIF5AQ12840 1032 aa14.29□□□□□ -0.12
CPNE4-201ENST00000429747 TSGA10IPQ3SY00 556 aa14.29□□□□□ -0.12
CPNE4-201ENST00000429747 TTC38Q5R3I4 469 aa14.29□□□□□ -0.12
CPNE4-201ENST00000429747 GPIHBP1Q8IV16 184 aa14.29□□□□□ -0.12
CPNE4-201ENST00000429747 ZNF654Q8IZM8 581 aa14.29□□□□□ -0.12
CPNE4-201ENST00000429747 GREM2Q9H772 168 aa14.29□□□□□ -0.12
CPNE4-201ENST00000429747 PDE8AO60658 829 aa14.28□□□□□ -0.12
CPNE4-201ENST00000429747 ADAMTS2O95450 1211 aa14.28□□□□□ -0.12
CPNE4-201ENST00000429747 CCDC42Q96M95 316 aa14.28□□□□□ -0.12
CPNE4-201ENST00000429747 TSG101Q99816 390 aa14.28□□□□□ -0.12
CPNE4-201ENST00000429747 ARHGEF28Q8N1W1 1705 aaKnown RBP14.28□□□□□ -0.12
CPNE4-201ENST00000429747 AMPD3Q01432 767 aa14.28□□□□□ -0.12
CPNE4-201ENST00000429747 CCDC40Q4G0X9 1142 aa14.28□□□□□ -0.12
CPNE4-201ENST00000429747 FAM114A1Q8IWE2 563 aa14.28□□□□□ -0.12
CPNE4-201ENST00000429747 DHX40Q8IX18 779 aaKnown RBP14.28□□□□□ -0.12
CPNE4-201ENST00000429747 MROH1Q8NDA8 1641 aa14.28□□□□□ -0.12
CPNE4-201ENST00000429747 MACROD2A1Z1Q3 448 aa14.28□□□□□ -0.12
CPNE4-201ENST00000429747 KRT83P78385 493 aa14.28□□□□□ -0.12
CPNE4-201ENST00000429747 HLTFQ14527 1009 aaKnown RBP eCLIP14.28□□□□□ -0.12
CPNE4-201ENST00000429747 CT47A1Q5JQC4 288 aaPredicted RBP14.28□□□□□ -0.12
CPNE4-201ENST00000429747 TTF2Q9UNY4 1162 aaKnown RBP14.28□□□□□ -0.12
CPNE4-201ENST00000429747 TSPOAP1O95153 1857 aa14.27□□□□□ -0.12
CPNE4-201ENST00000429747 CALM1P0DP23 149 aa14.27□□□□□ -0.12
CPNE4-201ENST00000429747 CALM2P0DP24 149 aa14.27□□□□□ -0.12
CPNE4-201ENST00000429747 CALM3P0DP25 149 aa14.27□□□□□ -0.12
CPNE4-201ENST00000429747 RDXP35241 583 aaKnown RBP14.27□□□□□ -0.12
CPNE4-201ENST00000429747 DTHD1Q6ZMT9 781 aa14.27□□□□□ -0.12
CPNE4-201ENST00000429747 CCDC43Q96MW1 224 aaKnown RBP14.27□□□□□ -0.12
CPNE4-201ENST00000429747 SEPT11Q9NVA2 429 aaKnown RBP14.27□□□□□ -0.12
CPNE4-201ENST00000429747 IVLP07476 585 aa14.27□□□□□ -0.12
CPNE4-201ENST00000429747 TMEM266Q2M3C6 531 aa14.27□□□□□ -0.12
CPNE4-201ENST00000429747 DNAJC21Q5F1R6 531 aaKnown RBP14.27□□□□□ -0.12
CPNE4-201ENST00000429747 WWC2Q6AWC2 1192 aa14.27□□□□□ -0.12
CPNE4-201ENST00000429747 MCM9Q9NXL9 1143 aa14.27□□□□□ -0.12
CPNE4-201ENST00000429747 ATP6V1AP38606 617 aa14.27□□□□□ -0.13
CPNE4-201ENST00000429747 NR5A1Q13285 461 aa14.27□□□□□ -0.13
CPNE4-201ENST00000429747 GDAP1L1Q96MZ0 367 aa14.27□□□□□ -0.13
CPNE4-201ENST00000429747 ALDH8A1Q9H2A2 487 aaPredicted RBP14.27□□□□□ -0.13
CPNE4-201ENST00000429747 ZNF287Q9HBT7 754 aa14.27□□□□□ -0.13
CPNE4-201ENST00000429747 FGFR1OPO95684 399 aaKnown RBP14.26□□□□□ -0.13
CPNE4-201ENST00000429747 CALML3P27482 149 aa14.26□□□□□ -0.13
CPNE4-201ENST00000429747 PAK1Q13153 545 aa14.26□□□□□ -0.13
CPNE4-201ENST00000429747 DHX37Q8IY37 1157 aaKnown RBP14.26□□□□□ -0.13
CPNE4-201ENST00000429747 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.26□□□□□ -0.13
CPNE4-201ENST00000429747 UBA5Q9GZZ9 404 aa14.26□□□□□ -0.13
CPNE4-201ENST00000429747 FAM107BQ9H098 131 aa14.26□□□□□ -0.13
CPNE4-201ENST00000429747 STX10O60499 249 aa14.26□□□□□ -0.13
CPNE4-201ENST00000429747 PPP6R2O75170 966 aa14.26□□□□□ -0.13
CPNE4-201ENST00000429747 CYP26C1Q6V0L0 522 aa14.26□□□□□ -0.13
CPNE4-201ENST00000429747 TMTC1Q8IUR5 882 aa14.26□□□□□ -0.13
CPNE4-201ENST00000429747 FANCBQ8NB91 859 aa14.26□□□□□ -0.13
CPNE4-201ENST00000429747 SDR42E1Q8WUS8 393 aa14.26□□□□□ -0.13
CPNE4-201ENST00000429747 RAB34Q9BZG1 259 aa14.26□□□□□ -0.13
CPNE4-201ENST00000429747 TCEAL9Q9UHQ7 104 aa14.26□□□□□ -0.13
CPNE4-201ENST00000429747 H7C1W4 665 aa14.26□□□□□ -0.13
CPNE4-201ENST00000429747 CIAO1O76071 339 aa14.26□□□□□ -0.13
CPNE4-201ENST00000429747 TSPY3P0CV98 308 aa14.26□□□□□ -0.13
CPNE4-201ENST00000429747 TSPY8P0CW00 308 aa14.26□□□□□ -0.13
CPNE4-201ENST00000429747 CTSWP56202 376 aa14.26□□□□□ -0.13
CPNE4-201ENST00000429747 TBC1D8BQ0IIM8 1120 aa14.26□□□□□ -0.13
CPNE4-201ENST00000429747 SMYD4Q8IYR2 804 aaPredicted RBP14.26□□□□□ -0.13
CPNE4-201ENST00000429747 ZBTB38Q8NAP3 1195 aaPredicted RBP14.26□□□□□ -0.13
CPNE4-201ENST00000429747 SAMSN1Q9NSI8 373 aaKnown RBP14.26□□□□□ -0.13
CPNE4-201ENST00000429747 WWC3Q9ULE0 1092 aa14.26□□□□□ -0.13
CPNE4-201ENST00000429747 TMEM232C9JQI7 657 aa14.26□□□□□ -0.13
CPNE4-201ENST00000429747 CYP27B1O15528 508 aa14.26□□□□□ -0.13
CPNE4-201ENST00000429747 TACC1O75410 805 aa14.26□□□□□ -0.13
CPNE4-201ENST00000429747 ST3GAL1Q11201 340 aa14.26□□□□□ -0.13
CPNE4-201ENST00000429747 A0A0G2JLW4 131 aa14.25□□□□□ -0.13
CPNE4-201ENST00000429747 PCCAP05165 728 aaPredicted RBP14.25□□□□□ -0.13
CPNE4-201ENST00000429747 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.25□□□□□ -0.13
CPNE4-201ENST00000429747 MED23Q9ULK4 1368 aa14.25□□□□□ -0.13
CPNE4-201ENST00000429747 ZNF609O15014 1411 aa14.25□□□□□ -0.13
CPNE4-201ENST00000429747 IBSPP21815 317 aaPredicted RBP14.25□□□□□ -0.13
CPNE4-201ENST00000429747 NAPAP54920 295 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms