RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 NBPF10Q6P3W6 841 aaKnown RBP10.1□□□□□ -0.79
GABPB1-205ENST00000429662 NBPF15Q8N660 670 aa10.1□□□□□ -0.79
GABPB1-205ENST00000429662 FSIP1Q8NA03 581 aa10.1□□□□□ -0.79
GABPB1-205ENST00000429662 NCOA7Q8NI08 942 aa10.1□□□□□ -0.79
GABPB1-205ENST00000429662 ANKRD7Q92527 254 aa10.1□□□□□ -0.79
GABPB1-205ENST00000429662 APPBP2Q92624 585 aa10.1□□□□□ -0.79
GABPB1-205ENST00000429662 ZNF512BQ96KM6 892 aaPredicted RBP10.1□□□□□ -0.79
GABPB1-205ENST00000429662 USP28Q96RU2 1077 aa10.1□□□□□ -0.79
GABPB1-205ENST00000429662 FEZ1Q99689 392 aa10.1□□□□□ -0.79
GABPB1-205ENST00000429662 ISCA1Q9BUE6 129 aa10.1□□□□□ -0.79
GABPB1-205ENST00000429662 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.1□□□□□ -0.79
GABPB1-205ENST00000429662 BCL2L12Q9HB09 334 aa10.1□□□□□ -0.79
GABPB1-205ENST00000429662 POLR3EQ9NVU0 708 aa10.1□□□□□ -0.79
GABPB1-205ENST00000429662 TRPM7Q96QT4 1865 aa10.1□□□□□ -0.79
GABPB1-205ENST00000429662 TNNT1P13805 278 aa10.09□□□□□ -0.79
GABPB1-205ENST00000429662 KCNJ6P48051 423 aa10.09□□□□□ -0.79
GABPB1-205ENST00000429662 TIMM10P62072 90 aa10.09□□□□□ -0.79
GABPB1-205ENST00000429662 TCIRG1Q13488 830 aa10.09□□□□□ -0.79
GABPB1-205ENST00000429662 COL9A3Q14050 684 aaPredicted RBP10.09□□□□□ -0.79
GABPB1-205ENST00000429662 TTF1Q15361 905 aaPredicted RBP10.09□□□□□ -0.79
GABPB1-205ENST00000429662 SF3A1Q15459 793 aaKnown RBP10.09□□□□□ -0.79
GABPB1-205ENST00000429662 CPLX2Q6PUV4 134 aaKnown RBP10.09□□□□□ -0.79
GABPB1-205ENST00000429662 LRRC8AQ8IWT6 810 aa10.09□□□□□ -0.79
GABPB1-205ENST00000429662 MPNDQ8N594 471 aa10.09□□□□□ -0.79
GABPB1-205ENST00000429662 AIDAQ96BJ3 306 aa10.09□□□□□ -0.79
GABPB1-205ENST00000429662 C8orf76Q96K31 380 aa10.09□□□□□ -0.79
GABPB1-205ENST00000429662 TIGD1Q96MW7 591 aa10.09□□□□□ -0.79
GABPB1-205ENST00000429662 ZMYND15Q9H091 742 aa10.09□□□□□ -0.79
GABPB1-205ENST00000429662 TMEM88BA6NKF7 163 aa10.08□□□□□ -0.8
GABPB1-205ENST00000429662 PCCAP05165 728 aaPredicted RBP10.08□□□□□ -0.8
GABPB1-205ENST00000429662 STK38Q15208 465 aa10.08□□□□□ -0.8
GABPB1-205ENST00000429662 TPD52L1Q16890 204 aaPredicted RBP10.08□□□□□ -0.8
GABPB1-205ENST00000429662 HSP90AB3PQ58FF7 597 aa10.08□□□□□ -0.8
GABPB1-205ENST00000429662 SYNE3Q6ZMZ3 975 aa10.08□□□□□ -0.8
GABPB1-205ENST00000429662 RALYLQ86SE5 291 aaKnown RBP10.08□□□□□ -0.8
GABPB1-205ENST00000429662 FMR1NBQ8N0W7 255 aaPredicted RBP10.08□□□□□ -0.8
GABPB1-205ENST00000429662 ZNF687Q8N1G0 1237 aa10.08□□□□□ -0.8
GABPB1-205ENST00000429662 C17orf53Q8N3J3 647 aaPredicted RBP10.08□□□□□ -0.8
GABPB1-205ENST00000429662 LINC00301Q8NCQ3 95 aa10.08□□□□□ -0.8
GABPB1-205ENST00000429662 CCDC150Q8NCX0 1101 aa10.08□□□□□ -0.8
GABPB1-205ENST00000429662 CCDC112Q8NEF3 446 aa10.08□□□□□ -0.8
GABPB1-205ENST00000429662 FBXO18Q8NFZ0 1043 aa10.08□□□□□ -0.8
GABPB1-205ENST00000429662 JARID2Q92833 1246 aaPredicted RBP10.08□□□□□ -0.8
GABPB1-205ENST00000429662 SDF4Q9BRK5 362 aa10.08□□□□□ -0.8
GABPB1-205ENST00000429662 TMOD3Q9NYL9 352 aa10.08□□□□□ -0.8
GABPB1-205ENST00000429662 CDHR2Q9BYE9 1310 aa10.07□□□□□ -0.8
GABPB1-205ENST00000429662 A0A0C4DFX4 3053 aa10.07□□□□□ -0.8
GABPB1-205ENST00000429662 SCN7AQ01118 1682 aa10.07□□□□□ -0.8
GABPB1-205ENST00000429662 CENPFP49454 3210 aa10.07□□□□□ -0.8
GABPB1-205ENST00000429662 M0R2C6 588 aa10.07□□□□□ -0.8
GABPB1-205ENST00000429662 ZNF213O14771 459 aa10.07□□□□□ -0.8
GABPB1-205ENST00000429662 CPLX1O14810 134 aa10.07□□□□□ -0.8
GABPB1-205ENST00000429662 CCP110O43303 1012 aa10.07□□□□□ -0.8
GABPB1-205ENST00000429662 DDNO94850 711 aaPredicted RBP10.07□□□□□ -0.8
GABPB1-205ENST00000429662 CSF1RP07333 972 aa10.07□□□□□ -0.8
GABPB1-205ENST00000429662 RFC4P35249 363 aa10.07□□□□□ -0.8
GABPB1-205ENST00000429662 CCT2P78371 535 aaKnown RBP10.07□□□□□ -0.8
GABPB1-205ENST00000429662 TRDNQ13061 729 aa10.07□□□□□ -0.8
GABPB1-205ENST00000429662 ARSIQ5FYB1 569 aa10.07□□□□□ -0.8
GABPB1-205ENST00000429662 UTP14CQ5TAP6 766 aaKnown RBP10.07□□□□□ -0.8
GABPB1-205ENST00000429662 KIF6Q6ZMV9 814 aa10.07□□□□□ -0.8
GABPB1-205ENST00000429662 TTLL7Q6ZT98 887 aa10.07□□□□□ -0.8
GABPB1-205ENST00000429662 MB21D2Q8IYB1 491 aaPredicted RBP10.07□□□□□ -0.8
GABPB1-205ENST00000429662 CACTINQ8WUQ7 758 aaKnown RBP10.07□□□□□ -0.8
GABPB1-205ENST00000429662 NOL10Q9BSC4 688 aaKnown RBP10.07□□□□□ -0.8
GABPB1-205ENST00000429662 MFRPQ9BY79 579 aa10.07□□□□□ -0.8
GABPB1-205ENST00000429662 LRRC2Q9BYS8 371 aa10.07□□□□□ -0.8
GABPB1-205ENST00000429662 OSBPL5Q9H0X9 879 aaPredicted RBP10.07□□□□□ -0.8
GABPB1-205ENST00000429662 GOLPH3LQ9H4A5 285 aa10.07□□□□□ -0.8
GABPB1-205ENST00000429662 KIAA1468Q9P260 1216 aa10.07□□□□□ -0.8
GABPB1-205ENST00000429662 CGNQ9P2M7 1197 aaKnown RBP10.07□□□□□ -0.8
GABPB1-205ENST00000429662 NAP1L2Q9ULW6 460 aaPredicted RBP10.07□□□□□ -0.8
GABPB1-205ENST00000429662 PCDHA7Q9UN72 937 aa10.07□□□□□ -0.8
GABPB1-205ENST00000429662 STK24Q9Y6E0 443 aa10.07□□□□□ -0.8
GABPB1-205ENST00000429662 LTBP3Q9NS15 1303 aa10.06□□□□□ -0.8
GABPB1-205ENST00000429662 BCORQ6W2J9 1755 aa10.06□□□□□ -0.8
GABPB1-205ENST00000429662 SPTLC2O15270 562 aa10.06□□□□□ -0.8
GABPB1-205ENST00000429662 PRC1O43663 620 aa10.06□□□□□ -0.8
GABPB1-205ENST00000429662 FDPSP14324 419 aaKnown RBP10.06□□□□□ -0.8
GABPB1-205ENST00000429662 CMA1P23946 247 aa10.06□□□□□ -0.8
GABPB1-205ENST00000429662 CEBPZQ03701 1054 aaKnown RBP10.06□□□□□ -0.8
GABPB1-205ENST00000429662 IFIT5Q13325 482 aaKnown RBP10.06□□□□□ -0.8
GABPB1-205ENST00000429662 PTPN14Q15678 1187 aa10.06□□□□□ -0.8
GABPB1-205ENST00000429662 WASHC4Q2M389 1173 aa10.06□□□□□ -0.8
GABPB1-205ENST00000429662 LRRC24Q50LG9 513 aa10.06□□□□□ -0.8
GABPB1-205ENST00000429662 TAF7LQ5H9L4 462 aa10.06□□□□□ -0.8
GABPB1-205ENST00000429662 CEP135Q66GS9 1140 aa10.06□□□□□ -0.8
GABPB1-205ENST00000429662 C11orf57Q6ZUT1 292 aaPredicted RBP10.06□□□□□ -0.8
GABPB1-205ENST00000429662 LDHDQ86WU2 507 aa10.06□□□□□ -0.8
GABPB1-205ENST00000429662 DHX40Q8IX18 779 aaKnown RBP10.06□□□□□ -0.8
GABPB1-205ENST00000429662 ELOA2Q8IYF1 753 aaPredicted RBP10.06□□□□□ -0.8
GABPB1-205ENST00000429662 OSBP2Q969R2 916 aa10.06□□□□□ -0.8
GABPB1-205ENST00000429662 XAGE2Q96GT9 111 aa10.06□□□□□ -0.8
GABPB1-205ENST00000429662 GTPBP4Q9BZE4 634 aaKnown RBP10.06□□□□□ -0.8
GABPB1-205ENST00000429662 MCOLN1Q9GZU1 580 aa10.06□□□□□ -0.8
GABPB1-205ENST00000429662 TAF1DQ9H5J8 278 aaPredicted RBP10.06□□□□□ -0.8
GABPB1-205ENST00000429662 ORC3Q9UBD5 711 aaPredicted RBP10.06□□□□□ -0.8
GABPB1-205ENST00000429662 NDUFB9Q9Y6M9 179 aa10.06□□□□□ -0.8
GABPB1-205ENST00000429662 KLF18A0A0U1RQI7 1052 aa10.05□□□□□ -0.8
GABPB1-205ENST00000429662 IKBKBO14920 756 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms