RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 RAB11FIP4Q86YS3 637 aa10.5□□□□□ -0.73
SMC6-204ENST00000428868 AGBL3Q8NEM8 1001 aa10.5□□□□□ -0.73
SMC6-204ENST00000428868 ZBED3Q96IU2 234 aaPredicted RBP10.5□□□□□ -0.73
SMC6-204ENST00000428868 MRIQ9BWK5 157 aa10.5□□□□□ -0.73
SMC6-204ENST00000428868 AGXT2Q9BYV1 514 aa10.5□□□□□ -0.73
SMC6-204ENST00000428868 OSBPL5Q9H0X9 879 aaPredicted RBP10.5□□□□□ -0.73
SMC6-204ENST00000428868 TOMM22Q9NS69 142 aa10.5□□□□□ -0.73
SMC6-204ENST00000428868 ASTN2O75129 1339 aaPredicted RBP10.5□□□□□ -0.73
SMC6-204ENST00000428868 CNTNAP1P78357 1384 aa10.5□□□□□ -0.73
SMC6-204ENST00000428868 PAPPA2Q9BXP8 1791 aa10.49□□□□□ -0.73
SMC6-204ENST00000428868 PHIPQ8WWQ0 1821 aa10.49□□□□□ -0.73
SMC6-204ENST00000428868 DOCK1Q14185 1865 aa10.49□□□□□ -0.73
SMC6-204ENST00000428868 SPDYE2BA6NHP3 402 aa10.49□□□□□ -0.73
SMC6-204ENST00000428868 SH2B2O14492 632 aaPredicted RBP10.49□□□□□ -0.73
SMC6-204ENST00000428868 POLR3DP05423 398 aaPredicted RBP10.49□□□□□ -0.73
SMC6-204ENST00000428868 SPDYE6P0CI01 402 aa10.49□□□□□ -0.73
SMC6-204ENST00000428868 DDIT3P35638 169 aa10.49□□□□□ -0.73
SMC6-204ENST00000428868 TCP10Q12799 353 aa10.49□□□□□ -0.73
SMC6-204ENST00000428868 STK3Q13188 491 aa10.49□□□□□ -0.73
SMC6-204ENST00000428868 NBPF9Q3BBW0 867 aa10.49□□□□□ -0.73
SMC6-204ENST00000428868 FAM47AQ5JRC9 791 aa10.49□□□□□ -0.73
SMC6-204ENST00000428868 CCDC83Q8IWF9 413 aa10.49□□□□□ -0.73
SMC6-204ENST00000428868 ZSWIM5Q9P217 1185 aa10.49□□□□□ -0.73
SMC6-204ENST00000428868 DAXXQ9UER7 740 aaPredicted RBP10.49□□□□□ -0.73
SMC6-204ENST00000428868 BRPF3Q9ULD4 1205 aa10.49□□□□□ -0.73
SMC6-204ENST00000428868 SCAF8Q9UPN6 1271 aaKnown RBP10.49□□□□□ -0.73
SMC6-204ENST00000428868 LIMCH1Q9UPQ0 1083 aa10.49□□□□□ -0.73
SMC6-204ENST00000428868 DDTLA6NHG4 134 aaPredicted RBP10.48□□□□□ -0.73
SMC6-204ENST00000428868 FAM196BA6NMK8 535 aa10.48□□□□□ -0.73
SMC6-204ENST00000428868 NMT2O60551 498 aa10.48□□□□□ -0.73
SMC6-204ENST00000428868 HMGB1P09429 215 aaKnown RBP10.48□□□□□ -0.73
SMC6-204ENST00000428868 MCM5P33992 734 aa10.48□□□□□ -0.73
SMC6-204ENST00000428868 MCM2P49736 904 aa10.48□□□□□ -0.73
SMC6-204ENST00000428868 EIF6P56537 245 aaKnown RBP10.48□□□□□ -0.73
SMC6-204ENST00000428868 ZNF280AP59817 542 aaPredicted RBP10.48□□□□□ -0.73
SMC6-204ENST00000428868 TRDNQ13061 729 aa10.48□□□□□ -0.73
SMC6-204ENST00000428868 TNIP1Q15025 636 aa10.48□□□□□ -0.73
SMC6-204ENST00000428868 DLGAP5Q15398 846 aa10.48□□□□□ -0.73
SMC6-204ENST00000428868 C9orf131Q5VYM1 1079 aa10.48□□□□□ -0.73
SMC6-204ENST00000428868 SAMD7Q7Z3H4 446 aa10.48□□□□□ -0.73
SMC6-204ENST00000428868 CERS3Q8IU89 383 aa10.48□□□□□ -0.73
SMC6-204ENST00000428868 CDAN1Q8IWY9 1227 aa10.48□□□□□ -0.73
SMC6-204ENST00000428868 MICALL2Q8IY33 904 aa10.48□□□□□ -0.73
SMC6-204ENST00000428868 IGDCC4Q8TDY8 1250 aa10.48□□□□□ -0.73
SMC6-204ENST00000428868 IDI2Q9BXS1 227 aa10.48□□□□□ -0.73
SMC6-204ENST00000428868 DNAJC18Q9H819 358 aa10.48□□□□□ -0.73
SMC6-204ENST00000428868 LY9Q9HBG7 655 aa10.48□□□□□ -0.73
SMC6-204ENST00000428868 RNF181Q9P0P0 153 aa10.48□□□□□ -0.73
SMC6-204ENST00000428868 ZNF70Q9UC06 446 aaPredicted RBP10.48□□□□□ -0.73
SMC6-204ENST00000428868 WDR19Q8NEZ3 1342 aa10.48□□□□□ -0.73
SMC6-204ENST00000428868 COL2A1P02458 1487 aaPredicted RBP10.48□□□□□ -0.73
SMC6-204ENST00000428868 TCP10L2B9ZVM9 353 aa10.47□□□□□ -0.73
SMC6-204ENST00000428868 WNT10BO00744 389 aa10.47□□□□□ -0.73
SMC6-204ENST00000428868 ORC4O43929 436 aa10.47□□□□□ -0.73
SMC6-204ENST00000428868 RANBP6O60518 1105 aaKnown RBP10.47□□□□□ -0.73
SMC6-204ENST00000428868 RASA1P20936 1047 aa10.47□□□□□ -0.73
SMC6-204ENST00000428868 CDK8P49336 464 aa10.47□□□□□ -0.73
SMC6-204ENST00000428868 GABPAQ06546 454 aa10.47□□□□□ -0.73
SMC6-204ENST00000428868 SHROOM1Q2M3G4 852 aaPredicted RBP10.47□□□□□ -0.73
SMC6-204ENST00000428868 SPDYE2Q495Y8 402 aa10.47□□□□□ -0.73
SMC6-204ENST00000428868 RBM26Q5T8P6 1007 aaKnown RBP10.47□□□□□ -0.73
SMC6-204ENST00000428868 C16orf86Q6ZW13 317 aa10.47□□□□□ -0.73
SMC6-204ENST00000428868 MTMR14Q8NCE2 650 aa10.47□□□□□ -0.73
SMC6-204ENST00000428868 KRT23Q9C075 422 aa10.47□□□□□ -0.73
SMC6-204ENST00000428868 RNF41Q9H4P4 317 aaPredicted RBP10.47□□□□□ -0.73
SMC6-204ENST00000428868 CNNM2Q9H8M5 875 aa10.47□□□□□ -0.73
SMC6-204ENST00000428868 NCOA5Q9HCD5 579 aaKnown RBP10.47□□□□□ -0.73
SMC6-204ENST00000428868 MYOZ2Q9NPC6 264 aa10.47□□□□□ -0.73
SMC6-204ENST00000428868 HDAC9Q9UKV0 1011 aa10.47□□□□□ -0.73
SMC6-204ENST00000428868 WDR90Q96KV7 1748 aa10.47□□□□□ -0.73
SMC6-204ENST00000428868 KLF18A0A0U1RQI7 1052 aa10.46□□□□□ -0.73
SMC6-204ENST00000428868 IFIT3O14879 490 aaKnown RBP10.46□□□□□ -0.73
SMC6-204ENST00000428868 DDNO94850 711 aaPredicted RBP10.46□□□□□ -0.73
SMC6-204ENST00000428868 RXRAP19793 462 aa10.46□□□□□ -0.73
SMC6-204ENST00000428868 RPS12P25398 132 aaKnown RBP10.46□□□□□ -0.73
SMC6-204ENST00000428868 FGD1P98174 961 aa10.46□□□□□ -0.73
SMC6-204ENST00000428868 SCRN1Q12765 414 aa10.46□□□□□ -0.73
SMC6-204ENST00000428868 SEC23AQ15436 765 aa10.46□□□□□ -0.73
SMC6-204ENST00000428868 TBC1D10BQ4KMP7 808 aaPredicted RBP10.46□□□□□ -0.73
SMC6-204ENST00000428868 TMEM67Q5HYA8 995 aa10.46□□□□□ -0.73
SMC6-204ENST00000428868 FBXL16Q8N461 479 aa10.46□□□□□ -0.73
SMC6-204ENST00000428868 TRPM4Q8TD43 1214 aa10.46□□□□□ -0.73
SMC6-204ENST00000428868 GTF3C6Q969F1 213 aa10.46□□□□□ -0.73
SMC6-204ENST00000428868 MYL10Q9BUA6 226 aa10.46□□□□□ -0.73
SMC6-204ENST00000428868 VEZTQ9HBM0 779 aa10.46□□□□□ -0.73
SMC6-204ENST00000428868 CNOT7Q9UIV1 285 aaKnown RBP10.46□□□□□ -0.73
SMC6-204ENST00000428868 HPS5Q9UPZ3 1129 aa10.46□□□□□ -0.73
SMC6-204ENST00000428868 TNKSO95271 1327 aa10.46□□□□□ -0.73
SMC6-204ENST00000428868 PARP14Q460N5 1801 aa10.46□□□□□ -0.74
SMC6-204ENST00000428868 PTPRFP10586 1907 aa10.46□□□□□ -0.74
SMC6-204ENST00000428868 ATRNL1Q5VV63 1379 aa10.45□□□□□ -0.74
SMC6-204ENST00000428868 JAK2O60674 1132 aa10.45□□□□□ -0.74
SMC6-204ENST00000428868 PFKFB2O60825 505 aa10.45□□□□□ -0.74
SMC6-204ENST00000428868 PPFIA3O75145 1194 aa10.45□□□□□ -0.74
SMC6-204ENST00000428868 HSP90AA1P07900 732 aaKnown RBP10.45□□□□□ -0.74
SMC6-204ENST00000428868 PDIA3P30101 505 aaKnown RBP10.45□□□□□ -0.74
SMC6-204ENST00000428868 SHMT1P34896 483 aa10.45□□□□□ -0.74
SMC6-204ENST00000428868 EPS15P42566 896 aa10.45□□□□□ -0.74
SMC6-204ENST00000428868 EVCP57679 992 aa10.45□□□□□ -0.74
SMC6-204ENST00000428868 CCT2P78371 535 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms