RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 ANKRD44Q8N8A2 993 aa10.71□□□□□ -0.69
HDAC1-202ENST00000428704 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.71□□□□□ -0.69
HDAC1-202ENST00000428704 PTCD2Q8WV60 388 aaKnown RBP10.71□□□□□ -0.69
HDAC1-202ENST00000428704 ARAP2Q8WZ64 1704 aa10.71□□□□□ -0.69
HDAC1-202ENST00000428704 PRMT6Q96LA8 375 aaPredicted RBP10.71□□□□□ -0.69
HDAC1-202ENST00000428704 ADGRA2Q96PE1 1338 aa10.71□□□□□ -0.69
HDAC1-202ENST00000428704 ZSWIM6Q9HCJ5 1215 aa10.71□□□□□ -0.69
HDAC1-202ENST00000428704 EMILIN3Q9NT22 766 aa10.71□□□□□ -0.69
HDAC1-202ENST00000428704 C9orf78Q9NZ63 289 aaPredicted RBP10.71□□□□□ -0.69
HDAC1-202ENST00000428704 TNNQ9UQP3 1299 aa10.71□□□□□ -0.69
HDAC1-202ENST00000428704 PCDHB15Q9Y5E8 787 aa10.71□□□□□ -0.69
HDAC1-202ENST00000428704 ELNP15502 786 aa10.7□□□□□ -0.7
HDAC1-202ENST00000428704 CHRNDQ07001 517 aa10.7□□□□□ -0.7
HDAC1-202ENST00000428704 IFIT5Q13325 482 aaKnown RBP10.7□□□□□ -0.7
HDAC1-202ENST00000428704 RABL6Q3YEC7 729 aaPredicted RBP10.7□□□□□ -0.7
HDAC1-202ENST00000428704 ERO1BQ86YB8 467 aa10.7□□□□□ -0.7
HDAC1-202ENST00000428704 OXER1Q8TDS5 423 aa10.7□□□□□ -0.7
HDAC1-202ENST00000428704 ZNF594Q96JF6 807 aaPredicted RBP10.7□□□□□ -0.7
HDAC1-202ENST00000428704 CDX2Q99626 313 aaPredicted RBP10.7□□□□□ -0.7
HDAC1-202ENST00000428704 USP44Q9H0E7 712 aa10.7□□□□□ -0.7
HDAC1-202ENST00000428704 BICC1Q9H694 974 aaKnown RBP10.7□□□□□ -0.7
HDAC1-202ENST00000428704 ZBTB40Q9NUA8 1239 aa10.7□□□□□ -0.7
HDAC1-202ENST00000428704 GABRQQ9UN88 632 aa10.7□□□□□ -0.7
HDAC1-202ENST00000428704 LEMD3Q9Y2U8 911 aa10.7□□□□□ -0.7
HDAC1-202ENST00000428704 AOX1Q06278 1338 aa10.69□□□□□ -0.7
HDAC1-202ENST00000428704 SNAP23O00161 211 aa10.69□□□□□ -0.7
HDAC1-202ENST00000428704 PDHXO00330 501 aa10.69□□□□□ -0.7
HDAC1-202ENST00000428704 IRF6O14896 467 aa10.69□□□□□ -0.7
HDAC1-202ENST00000428704 TJAP1Q5JTD0 557 aa10.69□□□□□ -0.7
HDAC1-202ENST00000428704 CERS5Q8N5B7 392 aa10.69□□□□□ -0.7
HDAC1-202ENST00000428704 MPHOSPH8Q99549 860 aa10.69□□□□□ -0.7
HDAC1-202ENST00000428704 API5Q9BZZ5 524 aaKnown RBP10.69□□□□□ -0.7
HDAC1-202ENST00000428704 NBPF3Q9H094 633 aa10.69□□□□□ -0.7
HDAC1-202ENST00000428704 PAK6Q9NQU5 681 aaPredicted RBP10.69□□□□□ -0.7
HDAC1-202ENST00000428704 CHMP3Q9Y3E7 222 aa10.69□□□□□ -0.7
HDAC1-202ENST00000428704 PRUNE2Q8WUY3 3088 aa10.69□□□□□ -0.7
HDAC1-202ENST00000428704 TAF5LO75529 589 aa10.68□□□□□ -0.7
HDAC1-202ENST00000428704 ANP32AP39687 249 aaKnown RBP10.68□□□□□ -0.7
HDAC1-202ENST00000428704 FLT3LGP49771 235 aa10.68□□□□□ -0.7
HDAC1-202ENST00000428704 MAP3K12Q12852 859 aa10.68□□□□□ -0.7
HDAC1-202ENST00000428704 PPIL2Q13356 520 aa10.68□□□□□ -0.7
HDAC1-202ENST00000428704 ANKRD23Q86SG2 305 aa10.68□□□□□ -0.7
HDAC1-202ENST00000428704 CDAN1Q8IWY9 1227 aa10.68□□□□□ -0.7
HDAC1-202ENST00000428704 TMEM57Q8N5G2 664 aa10.68□□□□□ -0.7
HDAC1-202ENST00000428704 ANKLE1Q8NAG6 615 aa10.68□□□□□ -0.7
HDAC1-202ENST00000428704 PXYLP1Q8TE99 480 aa10.68□□□□□ -0.7
HDAC1-202ENST00000428704 ANKRD2Q9GZV1 360 aa10.68□□□□□ -0.7
HDAC1-202ENST00000428704 C11orf49Q9H6J7 331 aa10.68□□□□□ -0.7
HDAC1-202ENST00000428704 SNCAIPQ9Y6H5 919 aa10.68□□□□□ -0.7
HDAC1-202ENST00000428704 ECM29Q5VYK3 1845 aa10.68□□□□□ -0.7
HDAC1-202ENST00000428704 TBC1D12O60347 775 aa10.67□□□□□ -0.7
HDAC1-202ENST00000428704 KCNJ4P48050 445 aa10.67□□□□□ -0.7
HDAC1-202ENST00000428704 TNNI2P48788 182 aa10.67□□□□□ -0.7
HDAC1-202ENST00000428704 MDM2Q00987 491 aaPredicted RBP10.67□□□□□ -0.7
HDAC1-202ENST00000428704 CCDC57Q2TAC2 916 aa10.67□□□□□ -0.7
HDAC1-202ENST00000428704 SMC5Q8IY18 1101 aa10.67□□□□□ -0.7
HDAC1-202ENST00000428704 KCNV2Q8TDN2 545 aa10.67□□□□□ -0.7
HDAC1-202ENST00000428704 MYLIPQ8WY64 445 aa10.67□□□□□ -0.7
HDAC1-202ENST00000428704 TEPSINQ96N21 525 aa10.67□□□□□ -0.7
HDAC1-202ENST00000428704 IPO9Q96P70 1041 aaKnown RBP10.67□□□□□ -0.7
HDAC1-202ENST00000428704 WRNIP1Q96S55 665 aa10.67□□□□□ -0.7
HDAC1-202ENST00000428704 PUS3Q9BZE2 481 aaKnown RBP10.67□□□□□ -0.7
HDAC1-202ENST00000428704 TMEM39BQ9GZU3 492 aa10.67□□□□□ -0.7
HDAC1-202ENST00000428704 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.67□□□□□ -0.7
HDAC1-202ENST00000428704 CD209Q9NNX6 404 aa10.67□□□□□ -0.7
HDAC1-202ENST00000428704 ZNF70Q9UC06 446 aaPredicted RBP10.67□□□□□ -0.7
HDAC1-202ENST00000428704 ARIH1Q9Y4X5 557 aaPredicted RBP10.67□□□□□ -0.7
HDAC1-202ENST00000428704 PCDHGA4Q9Y5G9 962 aa10.67□□□□□ -0.7
HDAC1-202ENST00000428704 MYH13Q9UKX3 1938 aa10.66□□□□□ -0.7
HDAC1-202ENST00000428704 TCP10L2B9ZVM9 353 aa10.66□□□□□ -0.7
HDAC1-202ENST00000428704 FOSL2P15408 326 aa10.66□□□□□ -0.7
HDAC1-202ENST00000428704 C8orf34Q49A92 452 aa10.66□□□□□ -0.7
HDAC1-202ENST00000428704 LDHAL6AQ6ZMR3 332 aa10.66□□□□□ -0.7
HDAC1-202ENST00000428704 C15orf52Q6ZUT6 534 aaKnown RBP10.66□□□□□ -0.7
HDAC1-202ENST00000428704 ZKSCAN4Q969J2 545 aaPredicted RBP10.66□□□□□ -0.7
HDAC1-202ENST00000428704 FAM163AQ96GL9 167 aaPredicted RBP10.66□□□□□ -0.7
HDAC1-202ENST00000428704 PARK7Q99497 189 aaKnown RBP10.66□□□□□ -0.7
HDAC1-202ENST00000428704 TDRD3Q9H7E2 651 aaKnown RBP10.66□□□□□ -0.7
HDAC1-202ENST00000428704 OTOFQ9HC10 1997 aa10.66□□□□□ -0.7
HDAC1-202ENST00000428704 TNPO2O14787 897 aaKnown RBP10.65□□□□□ -0.7
HDAC1-202ENST00000428704 ST18O60284 1047 aa10.65□□□□□ -0.7
HDAC1-202ENST00000428704 RFX5P48382 616 aaPredicted RBP10.65□□□□□ -0.7
HDAC1-202ENST00000428704 IRF5Q13568 498 aa10.65□□□□□ -0.7
HDAC1-202ENST00000428704 ITPRIPQ8IWB1 547 aa10.65□□□□□ -0.7
HDAC1-202ENST00000428704 KLHDC4Q8TBB5 520 aa10.65□□□□□ -0.7
HDAC1-202ENST00000428704 LAMA2P24043 3122 aaKnown RBP10.65□□□□□ -0.7
HDAC1-202ENST00000428704 BCRP11274 1271 aa10.64□□□□□ -0.71
HDAC1-202ENST00000428704 HOXB1P14653 301 aaPredicted RBP10.64□□□□□ -0.71
HDAC1-202ENST00000428704 PPATQ06203 517 aa10.64□□□□□ -0.71
HDAC1-202ENST00000428704 LRRC24Q50LG9 513 aa10.64□□□□□ -0.71
HDAC1-202ENST00000428704 ARSIQ5FYB1 569 aa10.64□□□□□ -0.71
HDAC1-202ENST00000428704 TAF7LQ5H9L4 462 aa10.64□□□□□ -0.71
HDAC1-202ENST00000428704 VGLL2Q8N8G2 317 aa10.64□□□□□ -0.71
HDAC1-202ENST00000428704 MEIS3Q99687 375 aa10.64□□□□□ -0.71
HDAC1-202ENST00000428704 ANP32EQ9BTT0 268 aa10.64□□□□□ -0.71
HDAC1-202ENST00000428704 SEMA6BQ9H3T3 888 aa10.64□□□□□ -0.71
HDAC1-202ENST00000428704 CNNM1Q9NRU3 951 aa10.64□□□□□ -0.71
HDAC1-202ENST00000428704 JAG2Q9Y219 1238 aa10.64□□□□□ -0.71
HDAC1-202ENST00000428704 COL2A1P02458 1487 aaPredicted RBP10.63□□□□□ -0.71
HDAC1-202ENST00000428704 CYP2C8P10632 490 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms