RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 ARFGAP3Q9NP61 516 aa10□□□□□ -0.81
CTNND1-208ENST00000428599 ERCC6L2Q5T890 1561 aa10□□□□□ -0.81
CTNND1-208ENST00000428599 PTPDC1A2A3K4 754 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 HMGB1P1B2RPK0 211 aaPredicted RBP9.99□□□□□ -0.81
CTNND1-208ENST00000428599 CHMP2AO43633 222 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 NR1I2O75469 434 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 CCDC24Q8N4L8 307 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 ZNF830Q96NB3 372 aaPredicted RBP9.99□□□□□ -0.81
CTNND1-208ENST00000428599 RIOK1Q9BRS2 568 aaKnown RBP9.99□□□□□ -0.81
CTNND1-208ENST00000428599 SAMD15Q9P1V8 674 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 EYA2O00167 538 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 TNFAIP3P21580 790 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 ANO6Q4KMQ2 910 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 CERS3Q8IU89 383 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 IQUBQ8NA54 791 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 IPO4Q8TEX9 1081 aaKnown RBP9.99□□□□□ -0.81
CTNND1-208ENST00000428599 EPSTI1Q96J88 318 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 NKIRAS1Q9NYS0 192 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 ERVV-2B6SEH9 535 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 SPOPO43791 374 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 PLCD1P51178 756 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 RILPL1Q5EBL4 403 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 RAB3IPQ96QF0 476 aaPredicted RBP9.99□□□□□ -0.81
CTNND1-208ENST00000428599 IVLP07476 585 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 MYCLP12524 364 aaPredicted RBP9.99□□□□□ -0.81
CTNND1-208ENST00000428599 SYT1P21579 422 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 LARGE2Q8N3Y3 721 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 CCDC26Q8TAB7 109 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 SRRTQ9BXP5 876 aaKnown RBP9.99□□□□□ -0.81
CTNND1-208ENST00000428599 GPCPD1Q9NPB8 672 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 SWAP70Q9UH65 585 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 SAP30BPQ9UHR5 308 aaKnown RBP9.99□□□□□ -0.81
CTNND1-208ENST00000428599 CD2APQ9Y5K6 639 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 A0A1B0GUL7 405 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 H0YIN7 160 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 MNAT1P51948 309 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 AOPEPQ8N6M6 819 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 NCAPGQ9BPX3 1015 aa9.99□□□□□ -0.81
CTNND1-208ENST00000428599 HSPA1LP34931 641 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 TIMM10P62072 90 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 ARFGAP2Q8N6H7 521 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 KLHDC4Q8TBB5 520 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 ZNF594Q96JF6 807 aaPredicted RBP9.98□□□□□ -0.81
CTNND1-208ENST00000428599 TMX3Q96JJ7 454 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.98□□□□□ -0.815e-6■■■□□ 17.3
CTNND1-208ENST00000428599 DNAI1Q9UI46 699 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 GGA1Q9UJY5 639 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 ERVK-7P63135 1459 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 SKILP12757 684 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 PUM3Q15397 648 aaKnown RBP9.98□□□□□ -0.81
CTNND1-208ENST00000428599 RSPH3Q86UC2 560 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 FCHSD1Q86WN1 690 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 CARD10Q9BWT7 1032 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 ARHGEF35A5YM69 484 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 PHKG2P15735 406 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 VAV2P52735 878 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 EIF4A1P60842 406 aaKnown RBP9.98□□□□□ -0.81
CTNND1-208ENST00000428599 IRX3P78415 501 aaPredicted RBP9.98□□□□□ -0.81
CTNND1-208ENST00000428599 FYB2Q5VWT5 728 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 CPLX4Q7Z7G2 160 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 KIF1BO60333 1816 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 TLDC2A0PJX2 215 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 HIBADHP31937 336 aaKnown RBP9.98□□□□□ -0.81
CTNND1-208ENST00000428599 GIMAP6Q6P9H5 292 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 TAOK1Q7L7X3 1001 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 IFT81Q8WYA0 676 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 CAPZA3Q96KX2 299 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 TRAF5O00463 557 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 ZBTB7BO15156 539 aaPredicted RBP9.98□□□□□ -0.81
CTNND1-208ENST00000428599 BAG6P46379 1132 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 LETM2Q2VYF4 491 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 BRAPQ7Z569 592 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 GUCA1BQ9UMX6 200 aa9.98□□□□□ -0.81
CTNND1-208ENST00000428599 LUC7L2Q9Y383 392 aaKnown RBP9.98□□□□□ -0.81
CTNND1-208ENST00000428599 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-208ENST00000428599 CHST3Q7LGC8 479 aa9.97□□□□□ -0.81
CTNND1-208ENST00000428599 PPFIBP2Q8ND30 876 aa9.97□□□□□ -0.81
CTNND1-208ENST00000428599 CCDC94Q9BW85 323 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-208ENST00000428599 PPANQ9NQ55 473 aaKnown RBP9.97□□□□□ -0.81
CTNND1-208ENST00000428599 SMCR8Q8TEV9 937 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-208ENST00000428599 STMN2Q93045 179 aa9.97□□□□□ -0.81
CTNND1-208ENST00000428599 ZKSCAN3Q9BRR0 538 aa9.97□□□□□ -0.81
CTNND1-208ENST00000428599 P4HA1P13674 534 aa9.97□□□□□ -0.81
CTNND1-208ENST00000428599 MAPK8IP2Q13387 824 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-208ENST00000428599 PLIN2Q99541 437 aa9.97□□□□□ -0.81
CTNND1-208ENST00000428599 MBD4O95243 580 aa9.97□□□□□ -0.81
CTNND1-208ENST00000428599 KIF11P52732 1056 aa9.97□□□□□ -0.81
CTNND1-208ENST00000428599 EAPPQ56P03 285 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-208ENST00000428599 TNNI3KQ59H18 835 aa9.97□□□□□ -0.81
CTNND1-208ENST00000428599 INTS8Q75QN2 995 aaKnown RBP9.97□□□□□ -0.81
CTNND1-208ENST00000428599 FPGT-TNNI3KV9GXZ4 949 aa9.97□□□□□ -0.81
CTNND1-208ENST00000428599 PRPF6O94906 941 aaKnown RBP9.97□□□□□ -0.81
CTNND1-208ENST00000428599 PLEKHM2Q8IWE5 1019 aa9.97□□□□□ -0.81
CTNND1-208ENST00000428599 UBL4BQ8N7F7 174 aa9.97□□□□□ -0.81
CTNND1-208ENST00000428599 FAM114A2Q9NRY5 505 aa9.97□□□□□ -0.81
CTNND1-208ENST00000428599 CNNM4Q6P4Q7 775 aa9.96□□□□□ -0.81
CTNND1-208ENST00000428599 DPP8Q6V1X1 898 aaPredicted RBP9.96□□□□□ -0.81
CTNND1-208ENST00000428599 ZNF365Q70YC5 407 aa9.96□□□□□ -0.81
CTNND1-208ENST00000428599 NIM1KQ8IY84 436 aa9.96□□□□□ -0.81
CTNND1-208ENST00000428599 GPATCH11Q8N954 259 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms