RNA–Protein interactions for RNA: ENST00000428450.5

DDX39B-209, Transcript of DExD-box helicase 39B, humanhuman

TSL 4

Gene DDX39B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-209ENST00000428450 DDX4Q9NQI0 724 aaKnown RBP14.47□□□□□ -0.09
DDX39B-209ENST00000428450 NCOR1O75376 2440 aa14.46□□□□□ -0.09
DDX39B-209ENST00000428450 PEX10O60683 326 aa14.46□□□□□ -0.09
DDX39B-209ENST00000428450 SMAD3P84022 425 aaKnown RBP14.46□□□□□ -0.09
DDX39B-209ENST00000428450 PUM3Q15397 648 aaKnown RBP14.46□□□□□ -0.09
DDX39B-209ENST00000428450 CCL14Q16627 93 aa14.46□□□□□ -0.09
DDX39B-209ENST00000428450 CCDC27Q2M243 656 aa14.46□□□□□ -0.09
DDX39B-209ENST00000428450 WWC1Q8IX03 1113 aa14.46□□□□□ -0.09
DDX39B-209ENST00000428450 ANKRD44Q8N8A2 993 aa14.46□□□□□ -0.09
DDX39B-209ENST00000428450 KLHDC4Q8TBB5 520 aa14.46□□□□□ -0.09
DDX39B-209ENST00000428450 SENP6Q9GZR1 1112 aaPredicted RBP14.46□□□□□ -0.09
DDX39B-209ENST00000428450 BICC1Q9H694 974 aaKnown RBP14.46□□□□□ -0.09
DDX39B-209ENST00000428450 UTYO14607 1347 aa14.45□□□□□ -0.1
DDX39B-209ENST00000428450 TBC1D12O60347 775 aa14.45□□□□□ -0.1
DDX39B-209ENST00000428450 LDHBP07195 334 aaKnown RBP14.45□□□□□ -0.1
DDX39B-209ENST00000428450 ZKSCAN1P17029 563 aaPredicted RBP14.45□□□□□ -0.1
DDX39B-209ENST00000428450 ZEB1P37275 1124 aaPredicted RBP14.45□□□□□ -0.1
DDX39B-209ENST00000428450 HMGCS2P54868 508 aa14.45□□□□□ -0.1
DDX39B-209ENST00000428450 PABPC4Q13310 644 aaKnown RBP eCLIP14.45□□□□□ -0.1
DDX39B-209ENST00000428450 SH3D19Q5HYK7 790 aa14.45□□□□□ -0.1
DDX39B-209ENST00000428450 ZSCAN29Q8IWY8 852 aaPredicted RBP14.45□□□□□ -0.1
DDX39B-209ENST00000428450 TRMT44Q8IYL2 757 aaKnown RBP14.45□□□□□ -0.1
DDX39B-209ENST00000428450 USP38Q8NB14 1042 aa14.45□□□□□ -0.1
DDX39B-209ENST00000428450 ZNF280CQ8ND82 737 aa14.45□□□□□ -0.1
DDX39B-209ENST00000428450 SOCS4Q8WXH5 440 aa14.45□□□□□ -0.1
DDX39B-209ENST00000428450 TXNRD2Q9NNW7 524 aa14.45□□□□□ -0.1
DDX39B-209ENST00000428450 LOC285556D6RIA3 1793 aa14.45□□□□□ -0.1
DDX39B-209ENST00000428450 MAST2Q6P0Q8 1798 aa14.45□□□□□ -0.1
DDX39B-209ENST00000428450 BDP1A6H8Y1 2624 aa14.45□□□□□ -0.1
DDX39B-209ENST00000428450 SRCIN1Q9C0H9 1055 aa14.44□□□□□ -0.1
DDX39B-209ENST00000428450 GAKO14976 1311 aa14.43□□□□□ -0.1
DDX39B-209ENST00000428450 IL16Q14005 1332 aa14.43□□□□□ -0.1
DDX39B-209ENST00000428450 SALL1Q9NSC2 1324 aa14.43□□□□□ -0.1
DDX39B-209ENST00000428450 LTBP2Q14767 1821 aa14.43□□□□□ -0.1
DDX39B-209ENST00000428450 ATN1P54259 1190 aaPredicted RBP14.43□□□□□ -0.1
DDX39B-209ENST00000428450 Q3C1V9 767 aa14.43□□□□□ -0.1
DDX39B-209ENST00000428450 MORN1Q5T089 497 aa14.43□□□□□ -0.1
DDX39B-209ENST00000428450 LPIN2Q92539 896 aa14.43□□□□□ -0.1
DDX39B-209ENST00000428450 FAM122AQ96E09 287 aa14.43□□□□□ -0.1
DDX39B-209ENST00000428450 P2RX7Q99572 595 aaKnown RBP14.43□□□□□ -0.1
DDX39B-209ENST00000428450 OSBPL5Q9H0X9 879 aaPredicted RBP14.43□□□□□ -0.1
DDX39B-209ENST00000428450 FANCIQ9NVI1 1328 aa14.42□□□□□ -0.1
DDX39B-209ENST00000428450 FAM196BA6NMK8 535 aa14.42□□□□□ -0.1
DDX39B-209ENST00000428450 HOXD11P31277 338 aaPredicted RBP14.42□□□□□ -0.1
DDX39B-209ENST00000428450 RTP1P59025 263 aa14.42□□□□□ -0.1
DDX39B-209ENST00000428450 RRP1BQ14684 758 aaKnown RBP14.42□□□□□ -0.1
DDX39B-209ENST00000428450 SLC4A10Q6U841 1118 aa14.42□□□□□ -0.1
DDX39B-209ENST00000428450 GPRC5AQ8NFJ5 357 aa14.42□□□□□ -0.1
DDX39B-209ENST00000428450 RBPJLQ9UBG7 517 aa14.42□□□□□ -0.1
DDX39B-209ENST00000428450 PRKAG2Q9UGJ0 569 aa14.42□□□□□ -0.1
DDX39B-209ENST00000428450 MYH13Q9UKX3 1938 aa14.41□□□□□ -0.1
DDX39B-209ENST00000428450 TMEM265A0A087WTH1 108 aa14.41□□□□□ -0.1
DDX39B-209ENST00000428450 SLC5A1P13866 664 aa14.41□□□□□ -0.1
DDX39B-209ENST00000428450 MAPK4P31152 587 aa14.41□□□□□ -0.1
DDX39B-209ENST00000428450 HOXA7P31268 230 aaPredicted RBP14.41□□□□□ -0.1
DDX39B-209ENST00000428450 RGS2P41220 211 aa14.41□□□□□ -0.1
DDX39B-209ENST00000428450 PICALMQ13492 652 aa14.41□□□□□ -0.1
DDX39B-209ENST00000428450 POTEEQ6S8J3 1075 aa14.41□□□□□ -0.1
DDX39B-209ENST00000428450 GPR142Q7Z601 462 aa14.41□□□□□ -0.1
DDX39B-209ENST00000428450 BADQ92934 168 aa14.41□□□□□ -0.1
DDX39B-209ENST00000428450 FAM163AQ96GL9 167 aaPredicted RBP14.41□□□□□ -0.1
DDX39B-209ENST00000428450 TBC1D2Q9BYX2 928 aa14.41□□□□□ -0.1
DDX39B-209ENST00000428450 PORCNQ9H237 461 aa14.41□□□□□ -0.1
DDX39B-209ENST00000428450 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.41□□□□□ -0.1
DDX39B-209ENST00000428450 CAP2P40123 477 aa14.4□□□□□ -0.1
DDX39B-209ENST00000428450 HERVK_113P62684 666 aa14.4□□□□□ -0.1
DDX39B-209ENST00000428450 EXOSC9Q06265 439 aaKnown RBP14.4□□□□□ -0.1
DDX39B-209ENST00000428450 DDX10Q13206 875 aaKnown RBP14.4□□□□□ -0.1
DDX39B-209ENST00000428450 PDE3AQ14432 1141 aa14.4□□□□□ -0.1
DDX39B-209ENST00000428450 GRIN2CQ14957 1233 aa14.4□□□□□ -0.1
DDX39B-209ENST00000428450 LPAR1Q92633 364 aa14.4□□□□□ -0.1
DDX39B-209ENST00000428450 APBA2Q99767 749 aa14.4□□□□□ -0.1
DDX39B-209ENST00000428450 FLRT1Q9NZU1 646 aa14.4□□□□□ -0.1
DDX39B-209ENST00000428450 FRMPD3Q5JV73 1810 aa14.4□□□□□ -0.1
DDX39B-209ENST00000428450 MYH2Q9UKX2 1941 aa14.39□□□□□ -0.11
DDX39B-209ENST00000428450 USP17L5A8MUK1 530 aa14.39□□□□□ -0.11
DDX39B-209ENST00000428450 DNM1LO00429 736 aa14.39□□□□□ -0.11
DDX39B-209ENST00000428450 RHBDL3P58872 404 aa14.39□□□□□ -0.11
DDX39B-209ENST00000428450 IRX3P78415 501 aaPredicted RBP14.39□□□□□ -0.11
DDX39B-209ENST00000428450 DDX20Q9UHI6 824 aaKnown RBP14.39□□□□□ -0.11
DDX39B-209ENST00000428450 ATP11BQ9Y2G3 1177 aa14.39□□□□□ -0.11
DDX39B-209ENST00000428450 EYA2O00167 538 aa14.38□□□□□ -0.11
DDX39B-209ENST00000428450 ZBTB22O15209 634 aa14.38□□□□□ -0.11
DDX39B-209ENST00000428450 NPM3O75607 178 aaKnown RBP14.38□□□□□ -0.11
DDX39B-209ENST00000428450 BTDP43251 543 aa14.38□□□□□ -0.11
DDX39B-209ENST00000428450 RFX5P48382 616 aaPredicted RBP14.38□□□□□ -0.11
DDX39B-209ENST00000428450 ERVK-9P63128 1117 aa14.38□□□□□ -0.11
DDX39B-209ENST00000428450 ERVK-24P63145 666 aa14.38□□□□□ -0.11
DDX39B-209ENST00000428450 MAP3K12Q12852 859 aa14.38□□□□□ -0.11
DDX39B-209ENST00000428450 SLC39A5Q6ZMH5 540 aa14.38□□□□□ -0.11
DDX39B-209ENST00000428450 ATG9AQ7Z3C6 839 aa14.38□□□□□ -0.11
DDX39B-209ENST00000428450 PLEKHH3Q7Z736 793 aa14.38□□□□□ -0.11
DDX39B-209ENST00000428450 WDR18Q9BV38 432 aa14.38□□□□□ -0.11
DDX39B-209ENST00000428450 PRKRIP1Q9H875 184 aaPredicted RBP14.38□□□□□ -0.11
DDX39B-209ENST00000428450 DENND2AQ9ULE3 1009 aa14.38□□□□□ -0.11
DDX39B-209ENST00000428450 TRIM43BA6NCK2 446 aa14.37□□□□□ -0.11
DDX39B-209ENST00000428450 SEMA3EO15041 775 aa14.37□□□□□ -0.11
DDX39B-209ENST00000428450 PHKA1P46020 1223 aa14.37□□□□□ -0.11
DDX39B-209ENST00000428450 BACE1P56817 501 aa14.37□□□□□ -0.11
DDX39B-209ENST00000428450 MAP2K5Q13163 448 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms