RNA–Protein interactions for RNA: ENST00000428240.1

ITSN1-216, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 213 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-216ENST00000428240 GCLCP48506 637 aaPredicted RBP10.2□□□□□ -0.78
ITSN1-216ENST00000428240 HMGCS2P54868 508 aa10.2□□□□□ -0.78
ITSN1-216ENST00000428240 DOCK1Q14185 1865 aa10.2□□□□□ -0.78
ITSN1-216ENST00000428240 RRP1BQ14684 758 aaKnown RBP10.2□□□□□ -0.78
ITSN1-216ENST00000428240 ATP2B3Q16720 1220 aa10.2□□□□□ -0.78
ITSN1-216ENST00000428240 SIL1Q9H173 461 aa10.2□□□□□ -0.78
ITSN1-216ENST00000428240 DENND2AQ9ULE3 1009 aa10.2□□□□□ -0.78
ITSN1-216ENST00000428240 COL2A1P02458 1487 aaPredicted RBP10.19□□□□□ -0.78
ITSN1-216ENST00000428240 TBC1D12O60347 775 aa10.19□□□□□ -0.78
ITSN1-216ENST00000428240 BTDP43251 543 aa10.19□□□□□ -0.78
ITSN1-216ENST00000428240 RHBDL3P58872 404 aa10.19□□□□□ -0.78
ITSN1-216ENST00000428240 CACNB2Q08289 660 aaPredicted RBP10.19□□□□□ -0.78
ITSN1-216ENST00000428240 LHX8Q68G74 356 aa10.19□□□□□ -0.78
ITSN1-216ENST00000428240 FAM109BQ6ICB4 259 aaPredicted RBP10.19□□□□□ -0.78
ITSN1-216ENST00000428240 ZNF280CQ8ND82 737 aa10.19□□□□□ -0.78
ITSN1-216ENST00000428240 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.19□□□□□ -0.78
ITSN1-216ENST00000428240 GNL3LQ9NVN8 582 aaKnown RBP10.19□□□□□ -0.78
ITSN1-216ENST00000428240 MORF4L1Q9UBU8 362 aa10.19□□□□□ -0.78
ITSN1-216ENST00000428240 ABCF2Q9UG63 623 aa10.19□□□□□ -0.78
ITSN1-216ENST00000428240 DOCK3Q8IZD9 2030 aa10.19□□□□□ -0.78
ITSN1-216ENST00000428240 MYH13Q9UKX3 1938 aa10.19□□□□□ -0.78
ITSN1-216ENST00000428240 PLXNB2O15031 1838 aa10.19□□□□□ -0.78
ITSN1-216ENST00000428240 MUC3AQ02505 3323 aa10.18□□□□□ -0.78
ITSN1-216ENST00000428240 SEMA3EO15041 775 aa10.18□□□□□ -0.78
ITSN1-216ENST00000428240 CCND3P30281 292 aaPredicted RBP10.18□□□□□ -0.78
ITSN1-216ENST00000428240 ADORA1P30542 326 aa10.18□□□□□ -0.78
ITSN1-216ENST00000428240 CCL14Q16627 93 aa10.18□□□□□ -0.78
ITSN1-216ENST00000428240 SH3D19Q5HYK7 790 aa10.18□□□□□ -0.78
ITSN1-216ENST00000428240 CCDC102BQ68D86 513 aa10.18□□□□□ -0.78
ITSN1-216ENST00000428240 DZIP1Q86YF9 867 aaKnown RBP10.18□□□□□ -0.78
ITSN1-216ENST00000428240 MRPL50Q8N5N7 158 aaKnown RBP10.18□□□□□ -0.78
ITSN1-216ENST00000428240 ZNF384Q8TF68 577 aa10.18□□□□□ -0.78
ITSN1-216ENST00000428240 FAM163AQ96GL9 167 aaPredicted RBP10.18□□□□□ -0.78
ITSN1-216ENST00000428240 OSBPL5Q9H0X9 879 aaPredicted RBP10.18□□□□□ -0.78
ITSN1-216ENST00000428240 TXNRD2Q9NNW7 524 aa10.18□□□□□ -0.78
ITSN1-216ENST00000428240 LOC285556D6RIA3 1793 aa10.18□□□□□ -0.78
ITSN1-216ENST00000428240 MROH7-TTC4A0A0A0MT08 1334 aa10.17□□□□□ -0.78
ITSN1-216ENST00000428240 XRCC5P13010 732 aaKnown RBP10.17□□□□□ -0.78
ITSN1-216ENST00000428240 CAP2P40123 477 aa10.17□□□□□ -0.78
ITSN1-216ENST00000428240 PABPC4Q13310 644 aaKnown RBP eCLIP10.17□□□□□ -0.78
ITSN1-216ENST00000428240 RASGRF1Q13972 1273 aa10.17□□□□□ -0.78
ITSN1-216ENST00000428240 Q3C1V9 767 aa10.17□□□□□ -0.78
ITSN1-216ENST00000428240 ZGPATQ8N5A5 531 aaKnown RBP10.17□□□□□ -0.78
ITSN1-216ENST00000428240 P2RX7Q99572 595 aaKnown RBP10.17□□□□□ -0.78
ITSN1-216ENST00000428240 NUDT12Q9BQG2 462 aa10.17□□□□□ -0.78
ITSN1-216ENST00000428240 CEP126Q9P2H0 1117 aa10.17□□□□□ -0.78
ITSN1-216ENST00000428240 DNAH12Q6ZR08 3092 aa10.17□□□□□ -0.78
ITSN1-216ENST00000428240 PRUNE2Q8WUY3 3088 aa10.16□□□□□ -0.78
ITSN1-216ENST00000428240 GPR75-ASB3A0A0A6YYF3 556 aa10.16□□□□□ -0.78
ITSN1-216ENST00000428240 USP17L5A8MUK1 530 aa10.16□□□□□ -0.78
ITSN1-216ENST00000428240 CIAO1O76071 339 aa10.16□□□□□ -0.78
ITSN1-216ENST00000428240 ZKSCAN1P17029 563 aaPredicted RBP10.16□□□□□ -0.78
ITSN1-216ENST00000428240 JAG1P78504 1218 aa10.16□□□□□ -0.78
ITSN1-216ENST00000428240 MECOMQ03112 1051 aa10.16□□□□□ -0.78
ITSN1-216ENST00000428240 MTMR2Q13614 643 aa10.16□□□□□ -0.78
ITSN1-216ENST00000428240 POTEEQ6S8J3 1075 aa10.16□□□□□ -0.78
ITSN1-216ENST00000428240 USP6NLQ92738 828 aa10.16□□□□□ -0.78
ITSN1-216ENST00000428240 CDX2Q99626 313 aaPredicted RBP10.16□□□□□ -0.78
ITSN1-216ENST00000428240 PORCNQ9H237 461 aa10.16□□□□□ -0.78
ITSN1-216ENST00000428240 RBPJLQ9UBG7 517 aa10.16□□□□□ -0.78
ITSN1-216ENST00000428240 PA2G4Q9UQ80 394 aaKnown RBP10.16□□□□□ -0.78
ITSN1-216ENST00000428240 PTPRCP08575 1304 aa10.15□□□□□ -0.78
ITSN1-216ENST00000428240 ZBTB22O15209 634 aa10.15□□□□□ -0.78
ITSN1-216ENST00000428240 NPM3O75607 178 aaKnown RBP10.15□□□□□ -0.78
ITSN1-216ENST00000428240 HOXA7P31268 230 aaPredicted RBP10.15□□□□□ -0.78
ITSN1-216ENST00000428240 BACE1P56817 501 aa10.15□□□□□ -0.78
ITSN1-216ENST00000428240 TIMM10P62072 90 aa10.15□□□□□ -0.78
ITSN1-216ENST00000428240 HERVK_113P62684 666 aa10.15□□□□□ -0.78
ITSN1-216ENST00000428240 IRX3P78415 501 aaPredicted RBP10.15□□□□□ -0.78
ITSN1-216ENST00000428240 SHROOM1Q2M3G4 852 aaPredicted RBP10.15□□□□□ -0.78
ITSN1-216ENST00000428240 ZNF697Q5TEC3 545 aa10.15□□□□□ -0.78
ITSN1-216ENST00000428240 GPR142Q7Z601 462 aa10.15□□□□□ -0.78
ITSN1-216ENST00000428240 SLF2Q8IX21 1173 aa10.15□□□□□ -0.78
ITSN1-216ENST00000428240 GPRC5AQ8NFJ5 357 aa10.15□□□□□ -0.78
ITSN1-216ENST00000428240 SOCS4Q8WXH5 440 aa10.15□□□□□ -0.78
ITSN1-216ENST00000428240 TBC1D2Q9BYX2 928 aa10.15□□□□□ -0.78
ITSN1-216ENST00000428240 SENP6Q9GZR1 1112 aaPredicted RBP10.15□□□□□ -0.78
ITSN1-216ENST00000428240 MRS2Q9HD23 443 aa10.15□□□□□ -0.78
ITSN1-216ENST00000428240 PRDM6Q9NQX0 595 aa10.15□□□□□ -0.78
ITSN1-216ENST00000428240 FBXO3Q9UK99 471 aa10.15□□□□□ -0.78
ITSN1-216ENST00000428240 MYH2Q9UKX2 1941 aa10.15□□□□□ -0.79
ITSN1-216ENST00000428240 MAPK4P31152 587 aa10.14□□□□□ -0.79
ITSN1-216ENST00000428240 IL15P40933 162 aaPredicted RBP10.14□□□□□ -0.79
ITSN1-216ENST00000428240 ATN1P54259 1190 aaPredicted RBP10.14□□□□□ -0.79
ITSN1-216ENST00000428240 ERVK-9P63128 1117 aa10.14□□□□□ -0.79
ITSN1-216ENST00000428240 ERVK-24P63145 666 aa10.14□□□□□ -0.79
ITSN1-216ENST00000428240 PDE3AQ14432 1141 aa10.14□□□□□ -0.79
ITSN1-216ENST00000428240 MORN1Q5T089 497 aa10.14□□□□□ -0.79
ITSN1-216ENST00000428240 TRMT44Q8IYL2 757 aaKnown RBP10.14□□□□□ -0.79
ITSN1-216ENST00000428240 MAFAQ8NHW3 353 aaPredicted RBP10.14□□□□□ -0.79
ITSN1-216ENST00000428240 LBHD1Q9BQE6 289 aaPredicted RBP10.14□□□□□ -0.79
ITSN1-216ENST00000428240 WDR18Q9BV38 432 aa10.14□□□□□ -0.79
ITSN1-216ENST00000428240 AS3MTQ9HBK9 375 aa10.14□□□□□ -0.79
ITSN1-216ENST00000428240 PDS5AQ29RF7 1337 aaKnown RBP10.13□□□□□ -0.79
ITSN1-216ENST00000428240 RGS2P41220 211 aa10.13□□□□□ -0.79
ITSN1-216ENST00000428240 SHHQ15465 462 aa10.13□□□□□ -0.79
ITSN1-216ENST00000428240 C9orf50Q5SZB4 431 aa10.13□□□□□ -0.79
ITSN1-216ENST00000428240 SPTY2D1Q68D10 685 aaPredicted RBP10.13□□□□□ -0.79
ITSN1-216ENST00000428240 PI16Q6UXB8 463 aa10.13□□□□□ -0.79
ITSN1-216ENST00000428240 ERICH6Q7L0X2 663 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms