RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 DDTLA6NHG4 134 aaPredicted RBP11.06□□□□□ -0.64
SMC1A-203ENST00000428014 PDE6AP16499 860 aa11.06□□□□□ -0.64
SMC1A-203ENST00000428014 CYP7A1P22680 504 aa11.06□□□□□ -0.64
SMC1A-203ENST00000428014 ADD2P35612 726 aa11.06□□□□□ -0.64
SMC1A-203ENST00000428014 SLC9C2Q5TAH2 1124 aa11.06□□□□□ -0.64
SMC1A-203ENST00000428014 COL13A1Q5TAT6 717 aaPredicted RBP11.06□□□□□ -0.64
SMC1A-203ENST00000428014 IFFO2Q5TF58 517 aa11.06□□□□□ -0.64
SMC1A-203ENST00000428014 POTEHQ6S545 545 aa11.06□□□□□ -0.64
SMC1A-203ENST00000428014 TTC6Q86TZ1 520 aa11.06□□□□□ -0.64
SMC1A-203ENST00000428014 CDAN1Q8IWY9 1227 aa11.06□□□□□ -0.64
SMC1A-203ENST00000428014 RWDD1Q9H446 243 aaPredicted RBP11.06□□□□□ -0.64
SMC1A-203ENST00000428014 SNRKQ9NRH2 765 aa11.06□□□□□ -0.64
SMC1A-203ENST00000428014 ATP8A2Q9NTI2 1148 aa11.06□□□□□ -0.64
SMC1A-203ENST00000428014 AATFQ9NY61 560 aaKnown RBP eCLIP11.06□□□□□ -0.64
SMC1A-203ENST00000428014 STAP2Q9UGK3 403 aa11.06□□□□□ -0.64
SMC1A-203ENST00000428014 AK9Q5TCS8 1911 aa11.05□□□□□ -0.64
SMC1A-203ENST00000428014 GNRH1P01148 92 aa11.05□□□□□ -0.64
SMC1A-203ENST00000428014 HLA-DOAP06340 250 aa11.05□□□□□ -0.64
SMC1A-203ENST00000428014 ASNSP08243 561 aa11.05□□□□□ -0.64
SMC1A-203ENST00000428014 CHRM1P11229 460 aaPredicted RBP11.05□□□□□ -0.64
SMC1A-203ENST00000428014 GJA5P36382 358 aa11.05□□□□□ -0.64
SMC1A-203ENST00000428014 TCP10Q12799 353 aa11.05□□□□□ -0.64
SMC1A-203ENST00000428014 GRM1Q13255 1194 aa11.05□□□□□ -0.64
SMC1A-203ENST00000428014 ARHGEF6Q15052 776 aa11.05□□□□□ -0.64
SMC1A-203ENST00000428014 TATDN1Q6P1N9 297 aa11.05□□□□□ -0.64
SMC1A-203ENST00000428014 FASTKD5Q7L8L6 764 aaKnown RBP11.05□□□□□ -0.64
SMC1A-203ENST00000428014 ANKRD23Q86SG2 305 aa11.05□□□□□ -0.64
SMC1A-203ENST00000428014 ADGRA1Q86SQ6 560 aa11.05□□□□□ -0.64
SMC1A-203ENST00000428014 MAGEB6Q8N7X4 407 aa11.05□□□□□ -0.64
SMC1A-203ENST00000428014 KBTBD3Q8NAB2 608 aa11.05□□□□□ -0.64
SMC1A-203ENST00000428014 SH3RF3Q8TEJ3 882 aaPredicted RBP11.05□□□□□ -0.64
SMC1A-203ENST00000428014 CDK5RAP2Q96SN8 1893 aa11.05□□□□□ -0.64
SMC1A-203ENST00000428014 WDR18Q9BV38 432 aa11.05□□□□□ -0.64
SMC1A-203ENST00000428014 CRNKL1Q9BZJ0 848 aaKnown RBP11.05□□□□□ -0.64
SMC1A-203ENST00000428014 ANTXR1Q9H6X2 564 aa11.05□□□□□ -0.64
SMC1A-203ENST00000428014 MYO5AQ9Y4I1 1855 aaKnown RBP11.05□□□□□ -0.64
SMC1A-203ENST00000428014 DOCK1Q14185 1865 aa11.04□□□□□ -0.64
SMC1A-203ENST00000428014 DDX60LQ5H9U9 1706 aaKnown RBP11.04□□□□□ -0.64
SMC1A-203ENST00000428014 MYH7P12883 1935 aa11.04□□□□□ -0.64
SMC1A-203ENST00000428014 GPR25O00155 361 aa11.04□□□□□ -0.64
SMC1A-203ENST00000428014 HAX1O00165 279 aa11.04□□□□□ -0.64
SMC1A-203ENST00000428014 IRF6O14896 467 aa11.04□□□□□ -0.64
SMC1A-203ENST00000428014 TRPA1O75762 1119 aa11.04□□□□□ -0.64
SMC1A-203ENST00000428014 PTPRAP18433 802 aa11.04□□□□□ -0.64
SMC1A-203ENST00000428014 INPP5BP32019 993 aa11.04□□□□□ -0.64
SMC1A-203ENST00000428014 CAP2P40123 477 aa11.04□□□□□ -0.64
SMC1A-203ENST00000428014 PRKG1Q13976 671 aa11.04□□□□□ -0.64
SMC1A-203ENST00000428014 SH3D19Q5HYK7 790 aa11.04□□□□□ -0.64
SMC1A-203ENST00000428014 ZSCAN29Q8IWY8 852 aaPredicted RBP11.04□□□□□ -0.64
SMC1A-203ENST00000428014 ZFPM1Q8IX07 1006 aa11.04□□□□□ -0.64
SMC1A-203ENST00000428014 PROCA1Q8NCQ7 364 aaPredicted RBP11.04□□□□□ -0.64
SMC1A-203ENST00000428014 CRBNQ96SW2 442 aa11.04□□□□□ -0.64
SMC1A-203ENST00000428014 OSBPL3Q9H4L5 887 aa11.04□□□□□ -0.64
SMC1A-203ENST00000428014 ELP3Q9H9T3 547 aa11.04□□□□□ -0.64
SMC1A-203ENST00000428014 PICK1Q9NRD5 415 aa11.04□□□□□ -0.64
SMC1A-203ENST00000428014 AFG3L2Q9Y4W6 797 aa11.04□□□□□ -0.64
SMC1A-203ENST00000428014 A0A0G2JLL6 359 aaPredicted RBP11.03□□□□□ -0.64
SMC1A-203ENST00000428014 MAGEB6P1A0A0J9YX57 407 aa11.03□□□□□ -0.64
SMC1A-203ENST00000428014 IGF2BP3O00425 579 aaKnown RBP eCLIP11.03□□□□□ -0.64
SMC1A-203ENST00000428014 GOLIM4O00461 696 aa11.03□□□□□ -0.64
SMC1A-203ENST00000428014 GNAT2P19087 354 aa11.03□□□□□ -0.64
SMC1A-203ENST00000428014 NT5C2P49902 561 aa11.03□□□□□ -0.64
SMC1A-203ENST00000428014 MIGA2Q7L4E1 593 aa11.03□□□□□ -0.64
SMC1A-203ENST00000428014 PRRT2Q7Z6L0 340 aaPredicted RBP11.03□□□□□ -0.64
SMC1A-203ENST00000428014 CTU1Q7Z7A3 348 aaKnown RBP11.03□□□□□ -0.64
SMC1A-203ENST00000428014 TNS4Q8IZW8 715 aa11.03□□□□□ -0.64
SMC1A-203ENST00000428014 PI4K2BQ8TCG2 481 aa11.03□□□□□ -0.64
SMC1A-203ENST00000428014 TGFBRAP1Q8WUH2 860 aa11.03□□□□□ -0.64
SMC1A-203ENST00000428014 BRI3BPQ8WY22 251 aa11.03□□□□□ -0.64
SMC1A-203ENST00000428014 ZKSCAN4Q969J2 545 aaPredicted RBP11.03□□□□□ -0.64
SMC1A-203ENST00000428014 RNF25Q96BH1 459 aaPredicted RBP11.03□□□□□ -0.64
SMC1A-203ENST00000428014 OTUD5Q96G74 571 aa11.03□□□□□ -0.64
SMC1A-203ENST00000428014 PTPN18Q99952 460 aa11.03□□□□□ -0.64
SMC1A-203ENST00000428014 BOLA2Q9H3K6 86 aa11.03□□□□□ -0.64
SMC1A-203ENST00000428014 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.03□□□□□ -0.64
SMC1A-203ENST00000428014 AS3MTQ9HBK9 375 aa11.03□□□□□ -0.64
SMC1A-203ENST00000428014 ZFYVE28Q9HCC9 887 aa11.03□□□□□ -0.64
SMC1A-203ENST00000428014 SWAP70Q9UH65 585 aa11.03□□□□□ -0.64
SMC1A-203ENST00000428014 SERPINB13Q9UIV8 391 aa11.03□□□□□ -0.64
SMC1A-203ENST00000428014 ZNF532Q9HCE3 1301 aa11.03□□□□□ -0.64
SMC1A-203ENST00000428014 CCL15-CCL14A0A0B4J2E2 113 aa11.02□□□□□ -0.65
SMC1A-203ENST00000428014 C19orf81C9J6K1 198 aa11.02□□□□□ -0.65
SMC1A-203ENST00000428014 TLR2O60603 784 aa11.02□□□□□ -0.65
SMC1A-203ENST00000428014 FKTNO75072 461 aa11.02□□□□□ -0.65
SMC1A-203ENST00000428014 MX1P20591 662 aa11.02□□□□□ -0.65
SMC1A-203ENST00000428014 PRMT2P55345 433 aa11.02□□□□□ -0.65
SMC1A-203ENST00000428014 GABPAQ06546 454 aa11.02□□□□□ -0.65
SMC1A-203ENST00000428014 PICALMQ13492 652 aa11.02□□□□□ -0.65
SMC1A-203ENST00000428014 CCL15Q16663 113 aa11.02□□□□□ -0.65
SMC1A-203ENST00000428014 APPBP2Q92624 585 aa11.02□□□□□ -0.65
SMC1A-203ENST00000428014 ERO1AQ96HE7 468 aa11.02□□□□□ -0.65
SMC1A-203ENST00000428014 YTHDC1Q96MU7 727 aaKnown RBP11.02□□□□□ -0.65
SMC1A-203ENST00000428014 SIPA1L1O43166 1804 aa11.02□□□□□ -0.65
SMC1A-203ENST00000428014 PTPRFP10586 1907 aa11.01□□□□□ -0.65
SMC1A-203ENST00000428014 MYH1P12882 1939 aa11.01□□□□□ -0.65
SMC1A-203ENST00000428014 PHIPQ8WWQ0 1821 aa11.01□□□□□ -0.65
SMC1A-203ENST00000428014 USP17L5A8MUK1 530 aa11.01□□□□□ -0.65
SMC1A-203ENST00000428014 CAPN2P17655 700 aa11.01□□□□□ -0.65
SMC1A-203ENST00000428014 USP5P45974 858 aa11.01□□□□□ -0.65
SMC1A-203ENST00000428014 PABPC4Q13310 644 aaKnown RBP eCLIP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms