RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 TRIM17Q9Y577 477 aa25.06■■□□□ 1.6
HSPG2-205ENST00000427897 COL2A1P02458 1487 aaPredicted RBP25.06■■□□□ 1.6
HSPG2-205ENST00000427897 FLT1P17948 1338 aa25.06■■□□□ 1.6
HSPG2-205ENST00000427897 ATP5JP18859 108 aa25.05■■□□□ 1.6
HSPG2-205ENST00000427897 FOXP4Q8IVH2 680 aaPredicted RBP25.05■■□□□ 1.6
HSPG2-205ENST00000427897 GPATCH3Q96I76 525 aa25.05■■□□□ 1.6
HSPG2-205ENST00000427897 DCTPP1Q9H773 170 aa25.05■■□□□ 1.6
HSPG2-205ENST00000427897 PAG1Q9NWQ8 432 aa25.05■■□□□ 1.6
HSPG2-205ENST00000427897 ZBTB47Q9UFB7 747 aaPredicted RBP25.05■■□□□ 1.6
HSPG2-205ENST00000427897 PALD1Q9ULE6 856 aa25.05■■□□□ 1.6
HSPG2-205ENST00000427897 KCNH4Q9UQ05 1017 aa25.05■■□□□ 1.6
HSPG2-205ENST00000427897 MAGEB6P1A0A0J9YX57 407 aa25.04■■□□□ 1.6
HSPG2-205ENST00000427897 GADL1Q6ZQY3 521 aa25.04■■□□□ 1.6
HSPG2-205ENST00000427897 FASTKD5Q7L8L6 764 aaKnown RBP25.04■■□□□ 1.6
HSPG2-205ENST00000427897 ANKRD23Q86SG2 305 aa25.04■■□□□ 1.6
HSPG2-205ENST00000427897 CD99L2Q8TCZ2 262 aa25.04■■□□□ 1.6
HSPG2-205ENST00000427897 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.04■■□□□ 1.62e-14■■■■■ 74.8
HSPG2-205ENST00000427897 PDHXO00330 501 aa25.03■■□□□ 1.6
HSPG2-205ENST00000427897 KIF22Q14807 665 aa25.03■■□□□ 1.6
HSPG2-205ENST00000427897 FBXO46Q6PJ61 603 aaPredicted RBP25.03■■□□□ 1.6
HSPG2-205ENST00000427897 PDE6AP16499 860 aa25.02■■□□□ 1.6
HSPG2-205ENST00000427897 CAP2P40123 477 aa25.02■■□□□ 1.6
HSPG2-205ENST00000427897 SLC4A8Q2Y0W8 1093 aa25.02■■□□□ 1.6
HSPG2-205ENST00000427897 CRBNQ96SW2 442 aa25.02■■□□□ 1.6
HSPG2-205ENST00000427897 DOCK1Q14185 1865 aa25.02■■□□□ 1.6
HSPG2-205ENST00000427897 TRIM75PA6NK02 468 aa25.01■■□□□ 1.59
HSPG2-205ENST00000427897 TLR2O60603 784 aa25.01■■□□□ 1.59
HSPG2-205ENST00000427897 EDC3Q96F86 508 aaKnown RBP25.01■■□□□ 1.59
HSPG2-205ENST00000427897 HAUS7Q99871 368 aa25.01■■□□□ 1.59
HSPG2-205ENST00000427897 CRNKL1Q9BZJ0 848 aaKnown RBP25.01■■□□□ 1.59
HSPG2-205ENST00000427897 EFCC1Q9HA90 598 aa25.01■■□□□ 1.59
HSPG2-205ENST00000427897 AFG3L2Q9Y4W6 797 aa25.01■■□□□ 1.59
HSPG2-205ENST00000427897 ZNF532Q9HCE3 1301 aa25.01■■□□□ 1.59
HSPG2-205ENST00000427897 TTC6Q86TZ1 520 aa25■■□□□ 1.59
HSPG2-205ENST00000427897 TBC1D2Q9BYX2 928 aa25■■□□□ 1.59
HSPG2-205ENST00000427897 AS3MTQ9HBK9 375 aa25■■□□□ 1.59
HSPG2-205ENST00000427897 ECHDC1Q9NTX5 307 aa25■■□□□ 1.59
HSPG2-205ENST00000427897 HPS5Q9UPZ3 1129 aa25■■□□□ 1.59
HSPG2-205ENST00000427897 PCDHB15Q9Y5E8 787 aa25■■□□□ 1.59
HSPG2-205ENST00000427897 ZSCAN25Q6NSZ9 544 aa24.99■■□□□ 1.59
HSPG2-205ENST00000427897 CDK5RAP2Q96SN8 1893 aa24.99■■□□□ 1.59
HSPG2-205ENST00000427897 A0A0G2JLL6 359 aaPredicted RBP24.98■■□□□ 1.59
HSPG2-205ENST00000427897 USP17L5A8MUK1 530 aa24.98■■□□□ 1.59
HSPG2-205ENST00000427897 POLR3DP05423 398 aaPredicted RBP24.98■■□□□ 1.59
HSPG2-205ENST00000427897 OTOP1Q7RTM1 612 aa24.98■■□□□ 1.59
HSPG2-205ENST00000427897 PRRT2Q7Z6L0 340 aaPredicted RBP24.98■■□□□ 1.59
HSPG2-205ENST00000427897 CCDC84Q86UT8 332 aaPredicted RBP24.98■■□□□ 1.59
HSPG2-205ENST00000427897 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.98■■□□□ 1.59
HSPG2-205ENST00000427897 FOCADQ5VW36 1801 aa24.98■■□□□ 1.59
HSPG2-205ENST00000427897 ASNSP08243 561 aa24.97■■□□□ 1.59
HSPG2-205ENST00000427897 SPP2Q13103 211 aa24.97■■□□□ 1.59
HSPG2-205ENST00000427897 PARK7Q99497 189 aaKnown RBP24.97■■□□□ 1.59
HSPG2-205ENST00000427897 CPA4Q9UI42 421 aa24.97■■□□□ 1.59
HSPG2-205ENST00000427897 MYH1P12882 1939 aa24.96■■□□□ 1.59
HSPG2-205ENST00000427897 ZNF280CQ8ND82 737 aa24.96■■□□□ 1.59
HSPG2-205ENST00000427897 RIOK1Q9BRS2 568 aaKnown RBP24.96■■□□□ 1.59
HSPG2-205ENST00000427897 ECM2O94769 699 aaPredicted RBP24.95■■□□□ 1.58
HSPG2-205ENST00000427897 DDRGK1Q96HY6 314 aa24.95■■□□□ 1.58
HSPG2-205ENST00000427897 SERPINB13Q9UIV8 391 aa24.95■■□□□ 1.58
HSPG2-205ENST00000427897 ATAD5Q96QE3 1844 aa24.95■■□□□ 1.58
HSPG2-205ENST00000427897 ADD2P35612 726 aa24.94■■□□□ 1.58
HSPG2-205ENST00000427897 GPAT2Q6NUI2 795 aa24.94■■□□□ 1.58
HSPG2-205ENST00000427897 MCM9Q9NXL9 1143 aa24.94■■□□□ 1.58
HSPG2-205ENST00000427897 TCRBV5S4A2TA0A5A2 114 aa24.93■■□□□ 1.58
HSPG2-205ENST00000427897 GDF11O95390 407 aa24.93■■□□□ 1.58
HSPG2-205ENST00000427897 MOGSQ13724 837 aa24.93■■□□□ 1.58
HSPG2-205ENST00000427897 AMOTL1Q8IY63 956 aa24.93■■□□□ 1.58
HSPG2-205ENST00000427897 SMCR8Q8TEV9 937 aaPredicted RBP24.93■■□□□ 1.58
HSPG2-205ENST00000427897 ARMT1Q9H993 441 aa24.93■■□□□ 1.58
HSPG2-205ENST00000427897 GINM1Q9NU53 330 aa24.93■■□□□ 1.58
HSPG2-205ENST00000427897 PTPN22Q9Y2R2 807 aa24.93■■□□□ 1.58
HSPG2-205ENST00000427897 ERC2O15083 957 aa24.92■■□□□ 1.58
HSPG2-205ENST00000427897 CYP2C8P10632 490 aa24.92■■□□□ 1.58
HSPG2-205ENST00000427897 LACTBP83111 547 aaPredicted RBP24.92■■□□□ 1.58
HSPG2-205ENST00000427897 PABPC4Q13310 644 aaKnown RBP eCLIP24.92■■□□□ 1.58
HSPG2-205ENST00000427897 RRP1BQ14684 758 aaKnown RBP24.92■■□□□ 1.58
HSPG2-205ENST00000427897 C17orf99Q6UX52 265 aa24.92■■□□□ 1.58
HSPG2-205ENST00000427897 METTL16Q86W50 562 aaKnown RBP24.92■■□□□ 1.58
HSPG2-205ENST00000427897 LCORLQ8N3X6 602 aa24.92■■□□□ 1.58
HSPG2-205ENST00000427897 TMOD4Q9NZQ9 345 aa24.92■■□□□ 1.58
HSPG2-205ENST00000427897 PNMA3Q9UL41 463 aa24.92■■□□□ 1.58
HSPG2-205ENST00000427897 AGTPBP1Q9UPW5 1226 aa24.92■■□□□ 1.58
HSPG2-205ENST00000427897 MBD4O95243 580 aa24.91■■□□□ 1.58
HSPG2-205ENST00000427897 SOX10P56693 466 aa24.91■■□□□ 1.58
HSPG2-205ENST00000427897 ANKRD45Q5TZF3 282 aa24.91■■□□□ 1.58
HSPG2-205ENST00000427897 PROCA1Q8NCQ7 364 aaPredicted RBP24.91■■□□□ 1.58
HSPG2-205ENST00000427897 SDR42E1Q8WUS8 393 aa24.91■■□□□ 1.58
HSPG2-205ENST00000427897 CABP5Q9NP86 173 aa24.91■■□□□ 1.58
HSPG2-205ENST00000427897 SLC45A1Q9Y2W3 748 aa24.91■■□□□ 1.58
HSPG2-205ENST00000427897 FMNL1O95466 1100 aaPredicted RBP24.9■■□□□ 1.58
HSPG2-205ENST00000427897 OSBPP22059 807 aa24.9■■□□□ 1.58
HSPG2-205ENST00000427897 HOXD10P28358 340 aa24.9■■□□□ 1.58
HSPG2-205ENST00000427897 HMGCS2P54868 508 aa24.9■■□□□ 1.58
HSPG2-205ENST00000427897 AAMPQ13685 434 aa24.9■■□□□ 1.58
HSPG2-205ENST00000427897 UBE3CQ15386 1083 aa24.9■■□□□ 1.58
HSPG2-205ENST00000427897 LRRFIP1Q32MZ4 808 aaKnown RBP24.9■■□□□ 1.58
HSPG2-205ENST00000427897 CERKLQ49MI3 558 aaPredicted RBP24.9■■□□□ 1.58
HSPG2-205ENST00000427897 EHD4Q9H223 541 aa24.9■■□□□ 1.58
HSPG2-205ENST00000427897 DNAJC18Q9H819 358 aa24.9■■□□□ 1.58
HSPG2-205ENST00000427897 PHIPQ8WWQ0 1821 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms