RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 MAGEB6Q8N7X4 407 aa18.45■□□□□ 0.54
PHF1-204ENST00000427826 GNRH1P01148 92 aa18.44■□□□□ 0.54
PHF1-204ENST00000427826 SOX10P56693 466 aa18.44■□□□□ 0.54
PHF1-204ENST00000427826 MAPKAPK5Q8IW41 473 aa18.44■□□□□ 0.54
PHF1-204ENST00000427826 PARK7Q99497 189 aaKnown RBP18.44■□□□□ 0.54
PHF1-204ENST00000427826 TRIM34Q9BYJ4 488 aa18.44■□□□□ 0.54
PHF1-204ENST00000427826 ANTXR1Q9H6X2 564 aa18.44■□□□□ 0.54
PHF1-204ENST00000427826 FLT1P17948 1338 aa18.44■□□□□ 0.54
PHF1-204ENST00000427826 MAST2Q6P0Q8 1798 aa18.43■□□□□ 0.54
PHF1-204ENST00000427826 SLURP2P0DP57 97 aa18.43■□□□□ 0.54
PHF1-204ENST00000427826 CAP2P40123 477 aa18.43■□□□□ 0.54
PHF1-204ENST00000427826 C17orf99Q6UX52 265 aa18.43■□□□□ 0.54
PHF1-204ENST00000427826 SLC45A1Q9Y2W3 748 aa18.43■□□□□ 0.54
PHF1-204ENST00000427826 NDUFB9Q9Y6M9 179 aa18.43■□□□□ 0.54
PHF1-204ENST00000427826 TRIM75PA6NK02 468 aa18.42■□□□□ 0.54
PHF1-204ENST00000427826 FAM196BA6NMK8 535 aa18.42■□□□□ 0.54
PHF1-204ENST00000427826 HLA-DOAP06340 250 aa18.42■□□□□ 0.54
PHF1-204ENST00000427826 DYNLL1P63167 89 aaKnown RBP18.42■□□□□ 0.54
PHF1-204ENST00000427826 LACTBP83111 547 aaPredicted RBP18.42■□□□□ 0.54
PHF1-204ENST00000427826 GPAT2Q6NUI2 795 aa18.42■□□□□ 0.54
PHF1-204ENST00000427826 PPP4R3CPQ6ZMV5 832 aa18.42■□□□□ 0.54
PHF1-204ENST00000427826 GADL1Q6ZQY3 521 aa18.42■□□□□ 0.54
PHF1-204ENST00000427826 METTL16Q86W50 562 aaKnown RBP18.42■□□□□ 0.54
PHF1-204ENST00000427826 CRACR2BQ8N4Y2 399 aaPredicted RBP18.42■□□□□ 0.54
PHF1-204ENST00000427826 LRRCC1Q9C099 1032 aa18.42■□□□□ 0.54
PHF1-204ENST00000427826 GINM1Q9NU53 330 aa18.42■□□□□ 0.54
PHF1-204ENST00000427826 USP5P45974 858 aa18.41■□□□□ 0.54
PHF1-204ENST00000427826 PRMT2P55345 433 aa18.41■□□□□ 0.54
PHF1-204ENST00000427826 MIGA1Q8NAN2 632 aa18.41■□□□□ 0.54
PHF1-204ENST00000427826 ZNF280CQ8ND82 737 aa18.41■□□□□ 0.54
PHF1-204ENST00000427826 BCL11AQ9H165 835 aa18.41■□□□□ 0.54
PHF1-204ENST00000427826 AS3MTQ9HBK9 375 aa18.41■□□□□ 0.54
PHF1-204ENST00000427826 PALD1Q9ULE6 856 aa18.41■□□□□ 0.54
PHF1-204ENST00000427826 USP17L5A8MUK1 530 aa18.4■□□□□ 0.54
PHF1-204ENST00000427826 GOLIM4O00461 696 aa18.4■□□□□ 0.54
PHF1-204ENST00000427826 SLC9C2Q5TAH2 1124 aa18.4■□□□□ 0.54
PHF1-204ENST00000427826 NBPF11Q86T75 865 aa18.4■□□□□ 0.54
PHF1-204ENST00000427826 DNAJC2Q99543 621 aaKnown RBP18.4■□□□□ 0.54
PHF1-204ENST00000427826 CPA4Q9UI42 421 aa18.4■□□□□ 0.54
PHF1-204ENST00000427826 ASNSP08243 561 aa18.39■□□□□ 0.53
PHF1-204ENST00000427826 ATP5JP18859 108 aa18.39■□□□□ 0.53
PHF1-204ENST00000427826 SPP2Q13103 211 aa18.39■□□□□ 0.53
PHF1-204ENST00000427826 PROCA1Q8NCQ7 364 aaPredicted RBP18.39■□□□□ 0.53
PHF1-204ENST00000427826 ARMC5Q96C12 935 aa18.39■□□□□ 0.53
PHF1-204ENST00000427826 SAP30BPQ9UHR5 308 aaKnown RBP18.39■□□□□ 0.53
PHF1-204ENST00000427826 AGTPBP1Q9UPW5 1226 aa18.39■□□□□ 0.53
PHF1-204ENST00000427826 MAGEB6P1A0A0J9YX57 407 aa18.38■□□□□ 0.53
PHF1-204ENST00000427826 PDE6AP16499 860 aa18.38■□□□□ 0.53
PHF1-204ENST00000427826 HOXD10P28358 340 aa18.38■□□□□ 0.53
PHF1-204ENST00000427826 CAP1Q01518 475 aa18.38■□□□□ 0.53
PHF1-204ENST00000427826 PABPC4Q13310 644 aaKnown RBP eCLIP18.38■□□□□ 0.532e-6■■□□□ 13.1
PHF1-204ENST00000427826 TTC6Q86TZ1 520 aa18.38■□□□□ 0.53
PHF1-204ENST00000427826 PAG1Q9NWQ8 432 aa18.38■□□□□ 0.53
PHF1-204ENST00000427826 PNMA3Q9UL41 463 aa18.38■□□□□ 0.53
PHF1-204ENST00000427826 ADGRA2Q96PE1 1338 aa18.38■□□□□ 0.53
PHF1-204ENST00000427826 DOCK1Q14185 1865 aa18.37■□□□□ 0.53
PHF1-204ENST00000427826 CYP2C8P10632 490 aa18.37■□□□□ 0.53
PHF1-204ENST00000427826 PSMC4P43686 418 aa18.37■□□□□ 0.53
PHF1-204ENST00000427826 SLC9C1Q4G0N8 1177 aa18.37■□□□□ 0.53
PHF1-204ENST00000427826 SMCR8Q8TEV9 937 aaPredicted RBP18.37■□□□□ 0.53
PHF1-204ENST00000427826 HAUS7Q99871 368 aa18.37■□□□□ 0.53
PHF1-204ENST00000427826 RIOK1Q9BRS2 568 aaKnown RBP18.37■□□□□ 0.53
PHF1-204ENST00000427826 WDR18Q9BV38 432 aa18.37■□□□□ 0.53
PHF1-204ENST00000427826 CRNKL1Q9BZJ0 848 aaKnown RBP18.37■□□□□ 0.53
PHF1-204ENST00000427826 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.37■□□□□ 0.532e-53■■■■□ 24.7
PHF1-204ENST00000427826 EHD4Q9H223 541 aa18.37■□□□□ 0.53
PHF1-204ENST00000427826 BOLA2Q9H3K6 86 aa18.37■□□□□ 0.53
PHF1-204ENST00000427826 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.37■□□□□ 0.53
PHF1-204ENST00000427826 FMNL1O95466 1100 aaPredicted RBP18.36■□□□□ 0.53
PHF1-204ENST00000427826 BCRP11274 1271 aa18.36■□□□□ 0.53
PHF1-204ENST00000427826 RRP1BQ14684 758 aaKnown RBP18.36■□□□□ 0.53
PHF1-204ENST00000427826 CCDC84Q86UT8 332 aaPredicted RBP18.36■□□□□ 0.53
PHF1-204ENST00000427826 ARHGAP39Q9C0H5 1083 aa18.36■□□□□ 0.53
PHF1-204ENST00000427826 DCTPP1Q9H773 170 aa18.36■□□□□ 0.53
PHF1-204ENST00000427826 DNAJC18Q9H819 358 aa18.36■□□□□ 0.53
PHF1-204ENST00000427826 ZNF532Q9HCE3 1301 aa18.36■□□□□ 0.53
PHF1-204ENST00000427826 SERPINB13Q9UIV8 391 aa18.36■□□□□ 0.53
PHF1-204ENST00000427826 PTCH2Q9Y6C5 1203 aa18.36■□□□□ 0.53
PHF1-204ENST00000427826 SH3D19Q5HYK7 790 aa18.35■□□□□ 0.53
PHF1-204ENST00000427826 GPATCH3Q96I76 525 aa18.35■□□□□ 0.53
PHF1-204ENST00000427826 TCRBV5S4A2TA0A5A2 114 aa18.34■□□□□ 0.53
PHF1-204ENST00000427826 C19orf81C9J6K1 198 aa18.34■□□□□ 0.53
PHF1-204ENST00000427826 HMGCS2P54868 508 aa18.34■□□□□ 0.53
PHF1-204ENST00000427826 FCGRTP55899 365 aa18.34■□□□□ 0.53
PHF1-204ENST00000427826 BACE1P56817 501 aa18.34■□□□□ 0.53
PHF1-204ENST00000427826 ZSCAN25Q6NSZ9 544 aa18.34■□□□□ 0.53
PHF1-204ENST00000427826 TATDN1Q6P1N9 297 aa18.34■□□□□ 0.53
PHF1-204ENST00000427826 TRIM47Q96LD4 638 aa18.34■□□□□ 0.53
PHF1-204ENST00000427826 TMOD4Q9NZQ9 345 aa18.34■□□□□ 0.53
PHF1-204ENST00000427826 SRRDQ9UH36 339 aa18.34■□□□□ 0.53
PHF1-204ENST00000427826 MYO5AQ9Y4I1 1855 aaKnown RBP18.34■□□□□ 0.53
PHF1-204ENST00000427826 SMARCA5O60264 1052 aaPredicted RBP18.33■□□□□ 0.52
PHF1-204ENST00000427826 GDF11O95390 407 aa18.33■□□□□ 0.52
PHF1-204ENST00000427826 POLR3DP05423 398 aaPredicted RBP18.33■□□□□ 0.52
PHF1-204ENST00000427826 OSBPP22059 807 aa18.33■□□□□ 0.52
PHF1-204ENST00000427826 RRP1P56182 461 aaKnown RBP18.33■□□□□ 0.52
PHF1-204ENST00000427826 TREML2Q5T2D2 321 aa18.33■□□□□ 0.52
PHF1-204ENST00000427826 ZNF333Q96JL9 665 aa18.33■□□□□ 0.52
PHF1-204ENST00000427826 TMEM106CQ9BVX2 250 aa18.33■□□□□ 0.52
PHF1-204ENST00000427826 ECHDC1Q9NTX5 307 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 357.5 ms