RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 IFT81Q8WYA0 676 aa8.89□□□□□ -0.99
CTNND1-207ENST00000426142 ATP6V0A2Q9Y487 856 aa8.89□□□□□ -0.99
CTNND1-207ENST00000426142 ADGBQ8N7X0 1667 aa8.89□□□□□ -0.99
CTNND1-207ENST00000426142 RHOXF2BP0C7M4 288 aa8.89□□□□□ -0.99
CTNND1-207ENST00000426142 SMTNP53814 917 aa8.89□□□□□ -0.99
CTNND1-207ENST00000426142 KRT40Q6A162 431 aa8.89□□□□□ -0.99
CTNND1-207ENST00000426142 C2CD5Q86YS7 1000 aa8.89□□□□□ -0.99
CTNND1-207ENST00000426142 RHOXF2Q9BQY4 288 aa8.89□□□□□ -0.99
CTNND1-207ENST00000426142 METP08581 1390 aa8.89□□□□□ -0.99
CTNND1-207ENST00000426142 KDRP35968 1356 aa8.89□□□□□ -0.99
CTNND1-207ENST00000426142 PDE6BP35913 854 aa8.88□□□□□ -0.99
CTNND1-207ENST00000426142 NONOQ15233 471 aaKnown RBP eCLIP8.88□□□□□ -0.99
CTNND1-207ENST00000426142 WDR44Q5JSH3 913 aa8.88□□□□□ -0.99
CTNND1-207ENST00000426142 HAUS3Q68CZ6 603 aa8.88□□□□□ -0.99
CTNND1-207ENST00000426142 GIGYF2Q6Y7W6 1299 aaKnown RBP8.88□□□□□ -0.99
CTNND1-207ENST00000426142 CCDC25Q86WR0 208 aa8.88□□□□□ -0.99
CTNND1-207ENST00000426142 KIAA0825Q8IV33 1275 aa8.88□□□□□ -0.99
CTNND1-207ENST00000426142 CCDC114Q96M63 670 aa8.88□□□□□ -0.99
CTNND1-207ENST00000426142 IQCGQ9H095 443 aaKnown RBP8.88□□□□□ -0.99
CTNND1-207ENST00000426142 ASAP1Q9ULH1 1129 aa8.88□□□□□ -0.99
CTNND1-207ENST00000426142 IBTKQ9P2D0 1353 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-207ENST00000426142 SAMD9Q5K651 1589 aa8.88□□□□□ -0.99
CTNND1-207ENST00000426142 USP17L12C9JPN9 530 aa8.88□□□□□ -0.99
CTNND1-207ENST00000426142 USP17L21D6R901 530 aa8.88□□□□□ -0.99
CTNND1-207ENST00000426142 ARID4AP29374 1257 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-207ENST00000426142 USP44Q9H0E7 712 aa8.88□□□□□ -0.99
CTNND1-207ENST00000426142 BLZF1Q9H2G9 400 aa8.88□□□□□ -0.99
CTNND1-207ENST00000426142 GPHNQ9NQX3 736 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-207ENST00000426142 LRWD1Q9UFC0 647 aa8.88□□□□□ -0.99
CTNND1-207ENST00000426142 TMEM94Q12767 1356 aa8.88□□□□□ -0.99
CTNND1-207ENST00000426142 NPC1L1Q9UHC9 1359 aa8.88□□□□□ -0.99
CTNND1-207ENST00000426142 STRN3Q13033 797 aa8.88□□□□□ -0.99
CTNND1-207ENST00000426142 CALCRLQ16602 461 aa8.88□□□□□ -0.99
CTNND1-207ENST00000426142 CCDC63Q8NA47 563 aa8.88□□□□□ -0.99
CTNND1-207ENST00000426142 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-207ENST00000426142 IFT74Q96LB3 600 aa8.88□□□□□ -0.99
CTNND1-207ENST00000426142 A0A0D9SFI3 127 aa8.88□□□□□ -0.99
CTNND1-207ENST00000426142 TBC1D8BQ0IIM8 1120 aa8.88□□□□□ -0.99
CTNND1-207ENST00000426142 BMS1Q14692 1282 aaKnown RBP8.88□□□□□ -0.99
CTNND1-207ENST00000426142 PROSER3Q2NL68 480 aa8.88□□□□□ -0.99
CTNND1-207ENST00000426142 CNNM4Q6P4Q7 775 aa8.88□□□□□ -0.99
CTNND1-207ENST00000426142 MICALCLQ6ZW33 695 aa8.88□□□□□ -0.99
CTNND1-207ENST00000426142 NELFCDQ8IXH7 590 aa8.88□□□□□ -0.99
CTNND1-207ENST00000426142 LLPHQ9BRT6 129 aaKnown RBP8.88□□□□□ -0.99
CTNND1-207ENST00000426142 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.88□□□□□ -0.99
CTNND1-207ENST00000426142 MYO5CQ9NQX4 1742 aa8.88□□□□□ -0.99
CTNND1-207ENST00000426142 QTRT2Q9H974 415 aaKnown RBP8.88□□□□□ -0.99
CTNND1-207ENST00000426142 KIAA0232Q92628 1395 aa8.87□□□□□ -0.99
CTNND1-207ENST00000426142 PRAMEF22A3QJZ6 481 aa8.87□□□□□ -0.99
CTNND1-207ENST00000426142 AKR1B15C9JRZ8 316 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-207ENST00000426142 GADD45BO75293 160 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-207ENST00000426142 FERP16591 822 aa8.87□□□□□ -0.99
CTNND1-207ENST00000426142 ATP5JP18859 108 aa8.87□□□□□ -0.99
CTNND1-207ENST00000426142 CRKLP46109 303 aaKnown RBP8.87□□□□□ -0.99
CTNND1-207ENST00000426142 RNASE9P60153 205 aaKnown RBP8.87□□□□□ -0.99
CTNND1-207ENST00000426142 PTH1RQ03431 593 aa8.87□□□□□ -0.99
CTNND1-207ENST00000426142 CHRNDQ07001 517 aa8.87□□□□□ -0.99
CTNND1-207ENST00000426142 CCDC122Q5T0U0 273 aa8.87□□□□□ -0.99
CTNND1-207ENST00000426142 MYCT1Q8N699 235 aa8.87□□□□□ -0.99
CTNND1-207ENST00000426142 CSGALNACT2Q8N6G5 542 aa8.87□□□□□ -0.99
CTNND1-207ENST00000426142 ZBTB38Q8NAP3 1195 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-207ENST00000426142 TEKT1Q969V4 418 aa8.87□□□□□ -0.99
CTNND1-207ENST00000426142 LRRC45Q96CN5 670 aa8.87□□□□□ -0.99
CTNND1-207ENST00000426142 PAGR1Q9BTK6 254 aa8.87□□□□□ -0.99
CTNND1-207ENST00000426142 GREM2Q9H772 168 aa8.87□□□□□ -0.99
CTNND1-207ENST00000426142 MAGI3Q5TCQ9 1506 aa8.87□□□□□ -0.99
CTNND1-207ENST00000426142 SYNRGQ9UMZ2 1314 aa8.87□□□□□ -0.99
CTNND1-207ENST00000426142 TRIM37O94972 964 aa8.87□□□□□ -0.99
CTNND1-207ENST00000426142 GOLGA8HP0CJ92 632 aa8.87□□□□□ -0.99
CTNND1-207ENST00000426142 PPP1R7Q15435 360 aa8.87□□□□□ -0.99
CTNND1-207ENST00000426142 IGSF22Q8N9C0 903 aa8.87□□□□□ -0.99
CTNND1-207ENST00000426142 PRIMPOLQ96LW4 560 aa8.87□□□□□ -0.99
CTNND1-207ENST00000426142 BAG1Q99933 345 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-207ENST00000426142 MLH3Q9UHC1 1453 aa8.87□□□□□ -0.99
CTNND1-207ENST00000426142 ATL3Q6DD88 541 aa8.87□□□□□ -0.99
CTNND1-207ENST00000426142 LRRC47Q8N1G4 583 aaKnown RBP8.87□□□□□ -0.99
CTNND1-207ENST00000426142 EAF2Q96CJ1 260 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-207ENST00000426142 SELENOSQ9BQE4 189 aa8.87□□□□□ -0.99
CTNND1-207ENST00000426142 CALUO43852 315 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-207ENST00000426142 IRX3P78415 501 aaPredicted RBP8.87□□□□□ -0.99
CTNND1-207ENST00000426142 MSANTD4Q8NCY6 345 aa8.87□□□□□ -0.99
CTNND1-207ENST00000426142 TBC1D22AQ8WUA7 517 aa8.87□□□□□ -0.99
CTNND1-207ENST00000426142 MAK16Q9BXY0 300 aaKnown RBP8.87□□□□□ -0.99
CTNND1-207ENST00000426142 ARFGAP3Q9NP61 516 aa8.87□□□□□ -0.99
CTNND1-207ENST00000426142 UGGT1Q9NYU2 1555 aa8.86□□□□□ -0.99
CTNND1-207ENST00000426142 TRPC3Q13507 836 aa8.86□□□□□ -0.99
CTNND1-207ENST00000426142 GPR162Q16538 588 aa8.86□□□□□ -0.99
CTNND1-207ENST00000426142 LONRF3Q496Y0 759 aa8.86□□□□□ -0.99
CTNND1-207ENST00000426142 HERC4Q5GLZ8 1057 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-207ENST00000426142 ARHGAP27Q6ZUM4 889 aa8.86□□□□□ -0.99
CTNND1-207ENST00000426142 KRT25Q7Z3Z0 450 aa8.86□□□□□ -0.99
CTNND1-207ENST00000426142 LEO1Q8WVC0 666 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-207ENST00000426142 PUS3Q9BZE2 481 aaKnown RBP8.86□□□□□ -0.99
CTNND1-207ENST00000426142 TRIM6Q9C030 488 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-207ENST00000426142 ZMYND15Q9H091 742 aa8.86□□□□□ -0.99
CTNND1-207ENST00000426142 LOC102724428A0A0B4J2F2 783 aa8.86□□□□□ -0.99
CTNND1-207ENST00000426142 H7C1D1 291 aa8.86□□□□□ -0.99
CTNND1-207ENST00000426142 ZNF202O95125 648 aa8.86□□□□□ -0.99
CTNND1-207ENST00000426142 SIK1P57059 783 aa8.86□□□□□ -0.99
CTNND1-207ENST00000426142 GOLGA1Q92805 767 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms