RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 FCHSD1Q86WN1 690 aa14.79□□□□□ -0.04
TOP2B-203ENST00000424225 CPLX3Q8WVH0 158 aa14.79□□□□□ -0.04
TOP2B-203ENST00000424225 SPEF2Q9C093 1822 aa14.79□□□□□ -0.04
TOP2B-203ENST00000424225 LRP6O75581 1613 aa14.78□□□□□ -0.04
TOP2B-203ENST00000424225 CCDC151A5D8V7 595 aa14.78□□□□□ -0.04
TOP2B-203ENST00000424225 CHMP4BP1P59074 171 aa14.78□□□□□ -0.04
TOP2B-203ENST00000424225 SRGAP1Q7Z6B7 1085 aa14.78□□□□□ -0.04
TOP2B-203ENST00000424225 GSPT2Q8IYD1 628 aaKnown RBP14.78□□□□□ -0.04
TOP2B-203ENST00000424225 SPATA20Q8TB22 786 aa14.78□□□□□ -0.04
TOP2B-203ENST00000424225 SRRTQ9BXP5 876 aaKnown RBP14.78□□□□□ -0.04
TOP2B-203ENST00000424225 SLC52A2Q9HAB3 445 aa14.78□□□□□ -0.04
TOP2B-203ENST00000424225 STRCP1A6NGW2 1772 aa14.78□□□□□ -0.04
TOP2B-203ENST00000424225 A0A1B0GTH6 734 aa14.78□□□□□ -0.04
TOP2B-203ENST00000424225 H7C1W4 665 aa14.78□□□□□ -0.04
TOP2B-203ENST00000424225 GCP02774 474 aa14.78□□□□□ -0.04
TOP2B-203ENST00000424225 ORAI2Q96SN7 254 aa14.78□□□□□ -0.04
TOP2B-203ENST00000424225 KCNJ14Q9UNX9 436 aa14.78□□□□□ -0.04
TOP2B-203ENST00000424225 PCDHB6Q9Y5E3 794 aa14.78□□□□□ -0.04
TOP2B-203ENST00000424225 MST1RQ04912 1400 aa14.78□□□□□ -0.04
TOP2B-203ENST00000424225 AGPSO00116 658 aa14.78□□□□□ -0.04
TOP2B-203ENST00000424225 FKBP4Q02790 459 aaKnown RBP eCLIP14.78□□□□□ -0.04
TOP2B-203ENST00000424225 BRAPQ7Z569 592 aa14.78□□□□□ -0.04
TOP2B-203ENST00000424225 SLC35F6Q8N357 371 aa14.78□□□□□ -0.04
TOP2B-203ENST00000424225 HNRNPLLQ8WVV9 542 aaKnown RBP14.78□□□□□ -0.04
TOP2B-203ENST00000424225 GDAP1L1Q96MZ0 367 aa14.78□□□□□ -0.04
TOP2B-203ENST00000424225 PHF8Q9UPP1 1060 aa14.78□□□□□ -0.04
TOP2B-203ENST00000424225 BTBD18B2RXH4 712 aa14.77□□□□□ -0.04
TOP2B-203ENST00000424225 PPP6R2O75170 966 aa14.77□□□□□ -0.04
TOP2B-203ENST00000424225 ZAP70P43403 619 aa14.77□□□□□ -0.04
TOP2B-203ENST00000424225 NR5A1Q13285 461 aa14.77□□□□□ -0.04
TOP2B-203ENST00000424225 IGDCC4Q8TDY8 1250 aa14.77□□□□□ -0.04
TOP2B-203ENST00000424225 ALG1Q9BT22 464 aa14.77□□□□□ -0.04
TOP2B-203ENST00000424225 GOLGA1Q92805 767 aa14.77□□□□□ -0.05
TOP2B-203ENST00000424225 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.77□□□□□ -0.05
TOP2B-203ENST00000424225 EIF3CLB5ME19 914 aaKnown RBP14.76□□□□□ -0.05
TOP2B-203ENST00000424225 POLR2DO15514 142 aaKnown RBP14.76□□□□□ -0.05
TOP2B-203ENST00000424225 ZMYND10O75800 440 aa14.76□□□□□ -0.05
TOP2B-203ENST00000424225 STX17P56962 302 aa14.76□□□□□ -0.05
TOP2B-203ENST00000424225 CASP8Q14790 479 aa14.76□□□□□ -0.05
TOP2B-203ENST00000424225 CCDC85AQ96PX6 553 aaPredicted RBP14.76□□□□□ -0.05
TOP2B-203ENST00000424225 EIF3CQ99613 913 aaKnown RBP14.76□□□□□ -0.05
TOP2B-203ENST00000424225 ARGLU1Q9NWB6 273 aaPredicted RBP14.76□□□□□ -0.05
TOP2B-203ENST00000424225 SLIT3O75094 1523 aa14.76□□□□□ -0.05
TOP2B-203ENST00000424225 PARP4Q9UKK3 1724 aaKnown RBP14.76□□□□□ -0.05
TOP2B-203ENST00000424225 SRGAP2O75044 1071 aa14.76□□□□□ -0.05
TOP2B-203ENST00000424225 CUL4BQ13620 913 aa14.76□□□□□ -0.05
TOP2B-203ENST00000424225 SPATA31A3Q5VYP0 1347 aa14.76□□□□□ -0.05
TOP2B-203ENST00000424225 TRPM3Q9HCF6 1732 aaPredicted RBP14.76□□□□□ -0.05
TOP2B-203ENST00000424225 CASP14P31944 242 aa14.76□□□□□ -0.05
TOP2B-203ENST00000424225 MTRQ99707 1265 aa14.76□□□□□ -0.05
TOP2B-203ENST00000424225 CYP27B1O15528 508 aa14.75□□□□□ -0.05
TOP2B-203ENST00000424225 RPS6KA5O75582 802 aa14.75□□□□□ -0.05
TOP2B-203ENST00000424225 IFIT1P09914 478 aaKnown RBP14.75□□□□□ -0.05
TOP2B-203ENST00000424225 SART3Q15020 963 aaKnown RBP14.75□□□□□ -0.05
TOP2B-203ENST00000424225 C1orf141Q5JVX7 400 aa14.75□□□□□ -0.05
TOP2B-203ENST00000424225 APOA5Q6Q788 366 aa14.75□□□□□ -0.05
TOP2B-203ENST00000424225 RAI14Q9P0K7 980 aa14.75□□□□□ -0.05
TOP2B-203ENST00000424225 SH2B2O14492 632 aaPredicted RBP14.75□□□□□ -0.05
TOP2B-203ENST00000424225 RASGRP2Q7LDG7 609 aa14.75□□□□□ -0.05
TOP2B-203ENST00000424225 EPSTI1Q96J88 318 aa14.75□□□□□ -0.05
TOP2B-203ENST00000424225 CHP1Q99653 195 aa14.75□□□□□ -0.05
TOP2B-203ENST00000424225 ESF1Q9H501 851 aaKnown RBP14.75□□□□□ -0.05
TOP2B-203ENST00000424225 LY9Q9HBG7 655 aa14.75□□□□□ -0.05
TOP2B-203ENST00000424225 ADD3Q9UEY8 706 aaKnown RBP14.75□□□□□ -0.05
TOP2B-203ENST00000424225 RCCD1A6NED2 376 aa14.74□□□□□ -0.05
TOP2B-203ENST00000424225 ZSCAN12O43309 604 aa14.74□□□□□ -0.05
TOP2B-203ENST00000424225 DDX58O95786 925 aaKnown RBP14.74□□□□□ -0.05
TOP2B-203ENST00000424225 TUBB4AP04350 444 aa14.74□□□□□ -0.05
TOP2B-203ENST00000424225 POSTNQ15063 836 aa14.74□□□□□ -0.05
TOP2B-203ENST00000424225 ZNF569Q5MCW4 686 aa14.74□□□□□ -0.05
TOP2B-203ENST00000424225 RNF216Q9NWF9 866 aaPredicted RBP14.74□□□□□ -0.05
TOP2B-203ENST00000424225 CDC23Q9UJX2 597 aa14.74□□□□□ -0.05
TOP2B-203ENST00000424225 SRCAPQ6ZRS2 3230 aa14.74□□□□□ -0.05
TOP2B-203ENST00000424225 MYH13Q9UKX3 1938 aa14.74□□□□□ -0.05
TOP2B-203ENST00000424225 MCAMP43121 646 aa14.74□□□□□ -0.05
TOP2B-203ENST00000424225 KCTD19Q17RG1 926 aaPredicted RBP14.74□□□□□ -0.05
TOP2B-203ENST00000424225 SKIDA1Q1XH10 827 aa14.74□□□□□ -0.05
TOP2B-203ENST00000424225 CNNM3Q8NE01 707 aa14.74□□□□□ -0.05
TOP2B-203ENST00000424225 ZMYM6O95789 1325 aa14.74□□□□□ -0.05
TOP2B-203ENST00000424225 B4E1Z4 1266 aa14.74□□□□□ -0.05
TOP2B-203ENST00000424225 ENC1O14682 589 aa14.74□□□□□ -0.05
TOP2B-203ENST00000424225 HDGFP51858 240 aaKnown RBP14.74□□□□□ -0.05
TOP2B-203ENST00000424225 THEMISQ8N1K5 641 aaPredicted RBP14.74□□□□□ -0.05
TOP2B-203ENST00000424225 STAMQ92783 540 aa14.74□□□□□ -0.05
TOP2B-203ENST00000424225 CHD4Q14839 1912 aa14.73□□□□□ -0.05
TOP2B-203ENST00000424225 PPP1R3GB7ZBB8 358 aa14.73□□□□□ -0.05
TOP2B-203ENST00000424225 GPAA1O43292 621 aa14.73□□□□□ -0.05
TOP2B-203ENST00000424225 PHKG2P15735 406 aa14.73□□□□□ -0.05
TOP2B-203ENST00000424225 AMOTQ4VCS5 1084 aa14.73□□□□□ -0.05
TOP2B-203ENST00000424225 CDKAL1Q5VV42 579 aa14.73□□□□□ -0.05
TOP2B-203ENST00000424225 SYNE3Q6ZMZ3 975 aa14.73□□□□□ -0.05
TOP2B-203ENST00000424225 MICU3Q86XE3 530 aa14.73□□□□□ -0.05
TOP2B-203ENST00000424225 PDE2AO00408 941 aaPredicted RBP14.73□□□□□ -0.05
TOP2B-203ENST00000424225 ENOX1Q8TC92 643 aaKnown RBP14.73□□□□□ -0.05
TOP2B-203ENST00000424225 DCCP43146 1447 aa14.73□□□□□ -0.05
TOP2B-203ENST00000424225 FECHP22830 423 aa14.72□□□□□ -0.05
TOP2B-203ENST00000424225 MRPS25P82663 173 aaKnown RBP14.72□□□□□ -0.05
TOP2B-203ENST00000424225 XAGE2Q96GT9 111 aa14.72□□□□□ -0.05
TOP2B-203ENST00000424225 RABEP2Q9H5N1 569 aa14.72□□□□□ -0.05
TOP2B-203ENST00000424225 FAM204AQ9H8W3 233 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms