RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, human

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1A-204	ENST00000424089	CDCA5	Q96FF9	252 aa		11.78	□□□□□ -0.52
POLR1A-204	ENST00000424089	STRBP	Q96SI9	672 aa	Known RBP	11.78	□□□□□ -0.52
POLR1A-204	ENST00000424089	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.78	□□□□□ -0.52
POLR1A-204	ENST00000424089	ARAP2	Q8WZ64	1704 aa		11.77	□□□□□ -0.52
POLR1A-204	ENST00000424089	FOXP2	O15409	715 aa		11.77	□□□□□ -0.53
POLR1A-204	ENST00000424089	EGFR	P00533	1210 aa		11.77	□□□□□ -0.53
POLR1A-204	ENST00000424089	RPS8	P62241	208 aa	Known RBP	11.77	□□□□□ -0.53
POLR1A-204	ENST00000424089	ZSCAN23	Q3MJ62	389 aa		11.77	□□□□□ -0.53
POLR1A-204	ENST00000424089	SLFNL1	Q499Z3	407 aa		11.77	□□□□□ -0.53
POLR1A-204	ENST00000424089	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.77	□□□□□ -0.53
POLR1A-204	ENST00000424089	ATL3	Q6DD88	541 aa		11.77	□□□□□ -0.53
POLR1A-204	ENST00000424089	NAA16	Q6N069	864 aa	Predicted RBP	11.77	□□□□□ -0.53
POLR1A-204	ENST00000424089	CAVIN1	Q6NZI2	390 aa	Known RBP	11.77	□□□□□ -0.53
POLR1A-204	ENST00000424089	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.77	□□□□□ -0.53
POLR1A-204	ENST00000424089	TCEANC2	Q96MN5	208 aa		11.77	□□□□□ -0.53
POLR1A-204	ENST00000424089	MTA3	Q9BTC8	594 aa		11.77	□□□□□ -0.53
POLR1A-204	ENST00000424089	NACAP1	Q9BZK3	213 aa		11.77	□□□□□ -0.53
POLR1A-204	ENST00000424089	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.77	□□□□□ -0.53
POLR1A-204	ENST00000424089	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.77	□□□□□ -0.53
POLR1A-204	ENST00000424089	DENND2A	Q9ULE3	1009 aa		11.77	□□□□□ -0.53
POLR1A-204	ENST00000424089	MINPP1	Q9UNW1	487 aa		11.77	□□□□□ -0.53
POLR1A-204	ENST00000424089	ELP1	O95163	1332 aa		11.77	□□□□□ -0.53
POLR1A-204	ENST00000424089	VPS37C	A5D8V6	355 aa	Predicted RBP	11.76	□□□□□ -0.53
POLR1A-204	ENST00000424089	BCAM	P50895	628 aa		11.76	□□□□□ -0.53
POLR1A-204	ENST00000424089	KRT85	P78386	507 aa		11.76	□□□□□ -0.53
POLR1A-204	ENST00000424089	DOK7	Q18PE1	504 aa		11.76	□□□□□ -0.53
POLR1A-204	ENST00000424089	TTLL5	Q6EMB2	1281 aa		11.76	□□□□□ -0.53
POLR1A-204	ENST00000424089	RASAL3	Q86YV0	1011 aa		11.76	□□□□□ -0.53
POLR1A-204	ENST00000424089	MB21D2	Q8IYB1	491 aa	Predicted RBP	11.76	□□□□□ -0.53
POLR1A-204	ENST00000424089	FAM184A	Q8NB25	1140 aa		11.76	□□□□□ -0.53
POLR1A-204	ENST00000424089	CNNM2	Q9H8M5	875 aa		11.76	□□□□□ -0.53
POLR1A-204	ENST00000424089	POLL	Q9UGP5	575 aa		11.76	□□□□□ -0.53
POLR1A-204	ENST00000424089	PRC1	O43663	620 aa		11.75	□□□□□ -0.53
POLR1A-204	ENST00000424089	APP	P05067	770 aa		11.75	□□□□□ -0.53
POLR1A-204	ENST00000424089	VIL1	P09327	827 aa	Known RBP	11.75	□□□□□ -0.53
POLR1A-204	ENST00000424089	PDIA3	P30101	505 aa	Known RBP	11.75	□□□□□ -0.53
POLR1A-204	ENST00000424089	GPSM2	P81274	684 aa		11.75	□□□□□ -0.53
POLR1A-204	ENST00000424089	SCRN1	Q12765	414 aa		11.75	□□□□□ -0.53
POLR1A-204	ENST00000424089	STK3	Q13188	491 aa		11.75	□□□□□ -0.53
POLR1A-204	ENST00000424089	FBXO33	Q7Z6M2	555 aa		11.75	□□□□□ -0.53
POLR1A-204	ENST00000424089	MAGEB6	Q8N7X4	407 aa		11.75	□□□□□ -0.53
POLR1A-204	ENST00000424089	ANP32B	Q92688	251 aa	Known RBP	11.75	□□□□□ -0.53
POLR1A-204	ENST00000424089	CELF1	Q92879	486 aa	Known RBP	11.75	□□□□□ -0.53
POLR1A-204	ENST00000424089	TMEM87B	Q96K49	555 aa		11.75	□□□□□ -0.53
POLR1A-204	ENST00000424089	LRP2BP	Q9P2M1	347 aa		11.75	□□□□□ -0.53
POLR1A-204	ENST00000424089	PSME4	Q14997	1843 aa		11.74	□□□□□ -0.53
POLR1A-204	ENST00000424089	SCN9A	Q15858	1988 aa		11.74	□□□□□ -0.53
POLR1A-204	ENST00000424089		H3BQV1	296 aa		11.74	□□□□□ -0.53
POLR1A-204	ENST00000424089	APOBR	Q0VD83	1088 aa		11.74	□□□□□ -0.53
POLR1A-204	ENST00000424089	COL9A3	Q14050	684 aa	Predicted RBP	11.74	□□□□□ -0.53
POLR1A-204	ENST00000424089	ANGEL2	Q5VTE6	544 aa	Known RBP	11.74	□□□□□ -0.53
POLR1A-204	ENST00000424089	LRSAM1	Q6UWE0	723 aa		11.74	□□□□□ -0.53
POLR1A-204	ENST00000424089	VPS37D	Q86XT2	251 aa		11.74	□□□□□ -0.53
POLR1A-204	ENST00000424089	NSUN7	Q8NE18	718 aa	Known RBP	11.74	□□□□□ -0.53
POLR1A-204	ENST00000424089	AGBL3	Q8NEM8	1001 aa		11.74	□□□□□ -0.53
POLR1A-204	ENST00000424089	TBC1D16	Q8TBP0	767 aa		11.74	□□□□□ -0.53
POLR1A-204	ENST00000424089	KRT23	Q9C075	422 aa		11.74	□□□□□ -0.53
POLR1A-204	ENST00000424089	RNF41	Q9H4P4	317 aa	Predicted RBP	11.74	□□□□□ -0.53
POLR1A-204	ENST00000424089	CFAP45	Q9UL16	551 aa		11.74	□□□□□ -0.53
POLR1A-204	ENST00000424089	CNPY2	Q9Y2B0	182 aa		11.74	□□□□□ -0.53
POLR1A-204	ENST00000424089	PITPNM2	Q9BZ72	1349 aa		11.74	□□□□□ -0.53
POLR1A-204	ENST00000424089	UFL1	O94874	794 aa		11.73	□□□□□ -0.53
POLR1A-204	ENST00000424089	MBD4	O95243	580 aa		11.73	□□□□□ -0.53
POLR1A-204	ENST00000424089	NF2	P35240	595 aa		11.73	□□□□□ -0.53
POLR1A-204	ENST00000424089	NT5C2	P49902	561 aa		11.73	□□□□□ -0.53
POLR1A-204	ENST00000424089	FXR1	P51114	621 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
POLR1A-204	ENST00000424089	TTLL12	Q14166	644 aa	Predicted RBP	11.73	□□□□□ -0.53
POLR1A-204	ENST00000424089	GIMAP6	Q6P9H5	292 aa		11.73	□□□□□ -0.53
POLR1A-204	ENST00000424089	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.73	□□□□□ -0.53
POLR1A-204	ENST00000424089	GAS2L3	Q86XJ1	694 aa		11.73	□□□□□ -0.53
POLR1A-204	ENST00000424089	IFNL3	Q8IZI9	196 aa		11.73	□□□□□ -0.53
POLR1A-204	ENST00000424089	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.73	□□□□□ -0.53
POLR1A-204	ENST00000424089	NAPB	Q9H115	298 aa		11.73	□□□□□ -0.53
POLR1A-204	ENST00000424089	KCNQ5	Q9NR82	932 aa		11.73	□□□□□ -0.53
POLR1A-204	ENST00000424089	TMEM63C	Q9P1W3	806 aa		11.73	□□□□□ -0.53
POLR1A-204	ENST00000424089	ANKIB1	Q9P2G1	1089 aa		11.73	□□□□□ -0.53
POLR1A-204	ENST00000424089	GGA1	Q9UJY5	639 aa		11.73	□□□□□ -0.53
POLR1A-204	ENST00000424089	SALL1	Q9NSC2	1324 aa		11.72	□□□□□ -0.53
POLR1A-204	ENST00000424089	PTPDC1	A2A3K4	754 aa		11.72	□□□□□ -0.53
POLR1A-204	ENST00000424089	DLL1	O00548	723 aa		11.72	□□□□□ -0.53
POLR1A-204	ENST00000424089	CDKL5	O76039	1030 aa		11.72	□□□□□ -0.53
POLR1A-204	ENST00000424089	TBC1D8	O95759	1140 aa		11.72	□□□□□ -0.53
POLR1A-204	ENST00000424089	PC	P11498	1178 aa	Known RBP	11.72	□□□□□ -0.53
POLR1A-204	ENST00000424089	LIFR	P42702	1097 aa		11.72	□□□□□ -0.53
POLR1A-204	ENST00000424089	ZNF280A	P59817	542 aa	Predicted RBP	11.72	□□□□□ -0.53
POLR1A-204	ENST00000424089	HAND2	P61296	217 aa		11.72	□□□□□ -0.53
POLR1A-204	ENST00000424089	DNM1	Q05193	864 aa	Known RBP	11.72	□□□□□ -0.53
POLR1A-204	ENST00000424089	SREBF2	Q12772	1141 aa		11.72	□□□□□ -0.53
POLR1A-204	ENST00000424089	NOM1	Q5C9Z4	860 aa	Known RBP	11.72	□□□□□ -0.53
POLR1A-204	ENST00000424089	CCDC183	Q5T5S1	534 aa		11.72	□□□□□ -0.53
POLR1A-204	ENST00000424089	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.72	□□□□□ -0.53
POLR1A-204	ENST00000424089	CPLX2	Q6PUV4	134 aa	Known RBP	11.72	□□□□□ -0.53
POLR1A-204	ENST00000424089	TMTC2	Q8N394	836 aa		11.72	□□□□□ -0.53
POLR1A-204	ENST00000424089	FAM84B	Q96KN1	310 aa	Predicted RBP	11.72	□□□□□ -0.53
POLR1A-204	ENST00000424089	LRRC2	Q9BYS8	371 aa		11.72	□□□□□ -0.53
POLR1A-204	ENST00000424089	PODXL2	Q9NZ53	605 aa		11.72	□□□□□ -0.53
POLR1A-204	ENST00000424089	ANGEL1	Q9UNK9	670 aa	Known RBP	11.72	□□□□□ -0.53
POLR1A-204	ENST00000424089	LEMD3	Q9Y2U8	911 aa		11.72	□□□□□ -0.53
POLR1A-204	ENST00000424089	ASTN2	O75129	1339 aa	Predicted RBP	11.71	□□□□□ -0.53
POLR1A-204	ENST00000424089	GSG1L2	A8MUP6	293 aa		11.71	□□□□□ -0.53

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