RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 GADL1Q6ZQY3 521 aa20.49■□□□□ 0.87
CCDC78-203ENST00000423653 PI4KBQ9UBF8 816 aa20.49■□□□□ 0.87
CCDC78-203ENST00000423653 RCAN3Q9UKA8 241 aa20.49■□□□□ 0.87
CCDC78-203ENST00000423653 MYO5AQ9Y4I1 1855 aaKnown RBP20.49■□□□□ 0.87
CCDC78-203ENST00000423653 PDE4DIPQ5VU43 2346 aa20.49■□□□□ 0.87
CCDC78-203ENST00000423653 FAM196BA6NMK8 535 aa20.48■□□□□ 0.87
CCDC78-203ENST00000423653 IDH1O75874 414 aaKnown RBP20.48■□□□□ 0.87
CCDC78-203ENST00000423653 GPAT2Q6NUI2 795 aa20.48■□□□□ 0.87
CCDC78-203ENST00000423653 RPAP2Q8IXW5 612 aaPredicted RBP20.48■□□□□ 0.87
CCDC78-203ENST00000423653 ARHGAP39Q9C0H5 1083 aa20.48■□□□□ 0.87
CCDC78-203ENST00000423653 PIH1D3Q9NQM4 214 aaKnown RBP20.48■□□□□ 0.87
CCDC78-203ENST00000423653 FLT1P17948 1338 aa20.48■□□□□ 0.87
CCDC78-203ENST00000423653 LOC285556D6RIA3 1793 aa20.47■□□□□ 0.87
CCDC78-203ENST00000423653 HOXD10P28358 340 aa20.47■□□□□ 0.87
CCDC78-203ENST00000423653 ADGRA1Q86SQ6 560 aa20.47■□□□□ 0.87
CCDC78-203ENST00000423653 TGFBRAP1Q8WUH2 860 aa20.47■□□□□ 0.87
CCDC78-203ENST00000423653 KIF1BPQ96EK5 621 aa20.47■□□□□ 0.87
CCDC78-203ENST00000423653 ZNF333Q96JL9 665 aa20.47■□□□□ 0.87
CCDC78-203ENST00000423653 TMEM106CQ9BVX2 250 aa20.47■□□□□ 0.87
CCDC78-203ENST00000423653 TRIM34Q9BYJ4 488 aa20.47■□□□□ 0.87
CCDC78-203ENST00000423653 COG6Q9Y2V7 657 aa20.47■□□□□ 0.87
CCDC78-203ENST00000423653 SIPA1L1O43166 1804 aa20.47■□□□□ 0.87
CCDC78-203ENST00000423653 SLURP2P0DP57 97 aa20.46■□□□□ 0.87
CCDC78-203ENST00000423653 CYP7A1P22680 504 aa20.46■□□□□ 0.87
CCDC78-203ENST00000423653 CAP2P40123 477 aa20.46■□□□□ 0.87
CCDC78-203ENST00000423653 PSMC4P43686 418 aa20.46■□□□□ 0.87
CCDC78-203ENST00000423653 MAP3K12Q12852 859 aa20.46■□□□□ 0.87
CCDC78-203ENST00000423653 MAPKAPK5Q8IW41 473 aa20.46■□□□□ 0.87
CCDC78-203ENST00000423653 CLASRPQ8N2M8 674 aaKnown RBP20.46■□□□□ 0.87
CCDC78-203ENST00000423653 CRACR2BQ8N4Y2 399 aaPredicted RBP20.46■□□□□ 0.87
CCDC78-203ENST00000423653 PROCA1Q8NCQ7 364 aaPredicted RBP20.46■□□□□ 0.87
CCDC78-203ENST00000423653 RHPN1Q8TCX5 695 aa20.46■□□□□ 0.87
CCDC78-203ENST00000423653 SMCR8Q8TEV9 937 aaPredicted RBP20.46■□□□□ 0.87
CCDC78-203ENST00000423653 ZBTB40Q9NUA8 1239 aa20.46■□□□□ 0.87
CCDC78-203ENST00000423653 PNMA3Q9UL41 463 aa20.46■□□□□ 0.87
CCDC78-203ENST00000423653 AGTPBP1Q9UPW5 1226 aa20.46■□□□□ 0.87
CCDC78-203ENST00000423653 CENPFP49454 3210 aa20.45■□□□□ 0.86
CCDC78-203ENST00000423653 FMNL1O95466 1100 aaPredicted RBP20.45■□□□□ 0.86
CCDC78-203ENST00000423653 HLA-DOAP06340 250 aa20.45■□□□□ 0.86
CCDC78-203ENST00000423653 CYP2C8P10632 490 aa20.45■□□□□ 0.86
CCDC78-203ENST00000423653 AS3MTQ9HBK9 375 aa20.45■□□□□ 0.86
CCDC78-203ENST00000423653 IL1RAPL2Q9NP60 686 aa20.45■□□□□ 0.86
CCDC78-203ENST00000423653 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.45■□□□□ 0.86
CCDC78-203ENST00000423653 POTEFA5A3E0 1075 aa20.44■□□□□ 0.86
CCDC78-203ENST00000423653 BCRP11274 1271 aa20.44■□□□□ 0.86
CCDC78-203ENST00000423653 FCGRTP55899 365 aa20.44■□□□□ 0.86
CCDC78-203ENST00000423653 TTF1Q15361 905 aaPredicted RBP20.44■□□□□ 0.86
CCDC78-203ENST00000423653 ZNF280CQ8ND82 737 aa20.44■□□□□ 0.86
CCDC78-203ENST00000423653 TRIM47Q96LD4 638 aa20.44■□□□□ 0.86
CCDC78-203ENST00000423653 SRRDQ9UH36 339 aa20.44■□□□□ 0.86
CCDC78-203ENST00000423653 USP17L5A8MUK1 530 aa20.43■□□□□ 0.86
CCDC78-203ENST00000423653 ASNSP08243 561 aa20.43■□□□□ 0.86
CCDC78-203ENST00000423653 IFIT2P09913 472 aaKnown RBP20.43■□□□□ 0.86
CCDC78-203ENST00000423653 PABPC4Q13310 644 aaKnown RBP eCLIP20.43■□□□□ 0.86
CCDC78-203ENST00000423653 PRPF38BQ5VTL8 546 aaKnown RBP20.43■□□□□ 0.86
CCDC78-203ENST00000423653 CCDC84Q86UT8 332 aaPredicted RBP20.43■□□□□ 0.86
CCDC78-203ENST00000423653 MAGEB6Q8N7X4 407 aa20.43■□□□□ 0.86
CCDC78-203ENST00000423653 MYPNQ86TC9 1320 aa20.43■□□□□ 0.86
CCDC78-203ENST00000423653 MGAMO43451 1857 aa20.43■□□□□ 0.86
CCDC78-203ENST00000423653 RAB11FIP3O75154 756 aa20.42■□□□□ 0.86
CCDC78-203ENST00000423653 OSBPP22059 807 aa20.42■□□□□ 0.86
CCDC78-203ENST00000423653 SPP2Q13103 211 aa20.42■□□□□ 0.86
CCDC78-203ENST00000423653 SLC4A8Q2Y0W8 1093 aa20.42■□□□□ 0.86
CCDC78-203ENST00000423653 METTL16Q86W50 562 aaKnown RBP20.42■□□□□ 0.86
CCDC78-203ENST00000423653 FOXP4Q8IVH2 680 aaPredicted RBP20.42■□□□□ 0.86
CCDC78-203ENST00000423653 RAET1EQ8TD07 263 aa20.42■□□□□ 0.86
CCDC78-203ENST00000423653 GINM1Q9NU53 330 aa20.42■□□□□ 0.86
CCDC78-203ENST00000423653 APBB1O00213 710 aa20.41■□□□□ 0.86
CCDC78-203ENST00000423653 ECM2O94769 699 aaPredicted RBP20.41■□□□□ 0.86
CCDC78-203ENST00000423653 USP5P45974 858 aa20.41■□□□□ 0.86
CCDC78-203ENST00000423653 MIGA1Q8NAN2 632 aa20.41■□□□□ 0.86
CCDC78-203ENST00000423653 SAP30BPQ9UHR5 308 aaKnown RBP20.41■□□□□ 0.86
CCDC78-203ENST00000423653 PALD1Q9ULE6 856 aa20.41■□□□□ 0.86
CCDC78-203ENST00000423653 NDUFB9Q9Y6M9 179 aa20.41■□□□□ 0.86
CCDC78-203ENST00000423653 MYH1P12882 1939 aa20.41■□□□□ 0.86
CCDC78-203ENST00000423653 KIAA0100Q14667 2235 aaKnown RBP20.41■□□□□ 0.86
CCDC78-203ENST00000423653 CTGFP29279 349 aa20.4■□□□□ 0.86
CCDC78-203ENST00000423653 HMGCS2P54868 508 aa20.4■□□□□ 0.86
CCDC78-203ENST00000423653 DYNLL1P63167 89 aaKnown RBP20.4■□□□□ 0.86
CCDC78-203ENST00000423653 PDE3AQ14432 1141 aa20.4■□□□□ 0.86
CCDC78-203ENST00000423653 SH3TC2Q8TF17 1288 aa20.4■□□□□ 0.86
CCDC78-203ENST00000423653 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.4■□□□□ 0.86
CCDC78-203ENST00000423653 ANTXR1Q9H6X2 564 aa20.4■□□□□ 0.86
CCDC78-203ENST00000423653 DNAJC18Q9H819 358 aa20.4■□□□□ 0.86
CCDC78-203ENST00000423653 NAV1Q8NEY1 1877 aa20.39■□□□□ 0.86
CCDC78-203ENST00000423653 DDX60LQ5H9U9 1706 aaKnown RBP20.39■□□□□ 0.86
CCDC78-203ENST00000423653 TREML2Q5T2D2 321 aa20.39■□□□□ 0.85
CCDC78-203ENST00000423653 SIRT2Q8IXJ6 389 aa20.39■□□□□ 0.85
CCDC78-203ENST00000423653 WDR18Q9BV38 432 aa20.39■□□□□ 0.85
CCDC78-203ENST00000423653 GRK4P32298 578 aa20.38■□□□□ 0.85
CCDC78-203ENST00000423653 GCLCP48506 637 aaPredicted RBP20.38■□□□□ 0.85
CCDC78-203ENST00000423653 RRP1BQ14684 758 aaKnown RBP20.38■□□□□ 0.85
CCDC78-203ENST00000423653 FAM110CQ1W6H9 321 aa20.38■□□□□ 0.85
CCDC78-203ENST00000423653 SH3D19Q5HYK7 790 aa20.38■□□□□ 0.85
CCDC78-203ENST00000423653 DNAJC2Q99543 621 aaKnown RBP20.38■□□□□ 0.85
CCDC78-203ENST00000423653 TMOD4Q9NZQ9 345 aa20.38■□□□□ 0.85
CCDC78-203ENST00000423653 TNPO2O14787 897 aaKnown RBP20.37■□□□□ 0.85
CCDC78-203ENST00000423653 EN2P19622 333 aaPredicted RBP20.37■□□□□ 0.85
CCDC78-203ENST00000423653 PRKCZQ05513 592 aa20.37■□□□□ 0.85
CCDC78-203ENST00000423653 MTMR2Q13614 643 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms