RNA–Protein interactions for RNA: ENST00000422622.3

SSPN-202, Transcript of sarcospan, humanhuman

TSL 2 BASIC

Gene SSPN, Length 4,348 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-202ENST00000422622 APOA5Q6Q788 366 aa11.57□□□□□ -0.56
SSPN-202ENST00000422622 SH3RF3Q8TEJ3 882 aaPredicted RBP11.57□□□□□ -0.56
SSPN-202ENST00000422622 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.57□□□□□ -0.56
SSPN-202ENST00000422622 SLIT2O94813 1529 aa11.57□□□□□ -0.56
SSPN-202ENST00000422622 RIC1Q4ADV7 1423 aa11.57□□□□□ -0.56
SSPN-202ENST00000422622 LIG1P18858 919 aa11.57□□□□□ -0.56
SSPN-202ENST00000422622 DDR1Q08345 913 aa11.57□□□□□ -0.56
SSPN-202ENST00000422622 CCDC183Q5T5S1 534 aa11.57□□□□□ -0.56
SSPN-202ENST00000422622 ZBTB9Q96C00 473 aa11.57□□□□□ -0.56
SSPN-202ENST00000422622 VEZTQ9HBM0 779 aa11.57□□□□□ -0.56
SSPN-202ENST00000422622 C21orf2O43822 256 aa11.57□□□□□ -0.56
SSPN-202ENST00000422622 NAP1L1P55209 391 aaKnown RBP11.57□□□□□ -0.56
SSPN-202ENST00000422622 NLRP5P59047 1200 aa11.57□□□□□ -0.56
SSPN-202ENST00000422622 ST3GAL1Q11201 340 aa11.57□□□□□ -0.56
SSPN-202ENST00000422622 USP28Q96RU2 1077 aa11.57□□□□□ -0.56
SSPN-202ENST00000422622 RBSNQ9H1K0 784 aa11.57□□□□□ -0.56
SSPN-202ENST00000422622 CPVLQ9H3G5 476 aa11.57□□□□□ -0.56
SSPN-202ENST00000422622 VPS54Q9P1Q0 977 aa11.57□□□□□ -0.56
SSPN-202ENST00000422622 SCAF8Q9UPN6 1271 aaKnown RBP11.57□□□□□ -0.56
SSPN-202ENST00000422622 COL14A1Q05707 1796 aaKnown RBP11.57□□□□□ -0.56
SSPN-202ENST00000422622 MAP3K11Q16584 847 aa11.56□□□□□ -0.56
SSPN-202ENST00000422622 CCDC96Q2M329 555 aa11.56□□□□□ -0.56
SSPN-202ENST00000422622 NAT10Q9H0A0 1025 aaKnown RBP11.56□□□□□ -0.56
SSPN-202ENST00000422622 CD209Q9NNX6 404 aa11.56□□□□□ -0.56
SSPN-202ENST00000422622 FAM196BA6NMK8 535 aa11.56□□□□□ -0.56
SSPN-202ENST00000422622 ZNF654Q8IZM8 581 aa11.56□□□□□ -0.56
SSPN-202ENST00000422622 TRMT1Q9NXH9 659 aaKnown RBP11.56□□□□□ -0.56
SSPN-202ENST00000422622 CCDC196A0A1B0GTZ2 297 aa11.56□□□□□ -0.56
SSPN-202ENST00000422622 H0YHG0 523 aa11.56□□□□□ -0.56
SSPN-202ENST00000422622 LETM1O95202 739 aaPredicted RBP11.56□□□□□ -0.56
SSPN-202ENST00000422622 GSTO1P78417 241 aa11.56□□□□□ -0.56
SSPN-202ENST00000422622 HSP90AA4PQ58FG1 418 aa11.56□□□□□ -0.56
SSPN-202ENST00000422622 LEO1Q8WVC0 666 aaPredicted RBP11.56□□□□□ -0.56
SSPN-202ENST00000422622 BRMS1Q9HCU9 246 aa11.56□□□□□ -0.56
SSPN-202ENST00000422622 BAZ2BQ9UIF8 2168 aaKnown RBP11.56□□□□□ -0.56
SSPN-202ENST00000422622 DDIT3P35638 169 aa11.56□□□□□ -0.56
SSPN-202ENST00000422622 ANTXR2P58335 489 aa11.56□□□□□ -0.56
SSPN-202ENST00000422622 GRIK5Q16478 980 aa11.56□□□□□ -0.56
SSPN-202ENST00000422622 SLC27A3Q5K4L6 730 aa11.56□□□□□ -0.56
SSPN-202ENST00000422622 USP17L3A6NCW0 530 aa11.55□□□□□ -0.56
SSPN-202ENST00000422622 USP17L4A6NCW7 530 aa11.55□□□□□ -0.56
SSPN-202ENST00000422622 KRT40Q6A162 431 aa11.55□□□□□ -0.56
SSPN-202ENST00000422622 USP17L1Q7RTZ2 530 aa11.55□□□□□ -0.56
SSPN-202ENST00000422622 PPIP5K2O43314 1243 aa11.55□□□□□ -0.56
SSPN-202ENST00000422622 SERPINC1P01008 464 aa11.55□□□□□ -0.56
SSPN-202ENST00000422622 ATP2B4P23634 1241 aa11.55□□□□□ -0.56
SSPN-202ENST00000422622 CDC27P30260 824 aa11.55□□□□□ -0.56
SSPN-202ENST00000422622 PPP4R3BQ5MIZ7 849 aa11.55□□□□□ -0.56
SSPN-202ENST00000422622 CCDC70Q6NSX1 233 aa11.55□□□□□ -0.56
SSPN-202ENST00000422622 HEATR3Q7Z4Q2 680 aa11.55□□□□□ -0.56
SSPN-202ENST00000422622 MB21D2Q8IYB1 491 aaPredicted RBP11.55□□□□□ -0.56
SSPN-202ENST00000422622 TMEM87BQ96K49 555 aa11.55□□□□□ -0.56
SSPN-202ENST00000422622 LEMD3Q9Y2U8 911 aa11.55□□□□□ -0.56
SSPN-202ENST00000422622 AFDNP55196 1824 aaKnown RBP11.55□□□□□ -0.56
SSPN-202ENST00000422622 PDE6BP35913 854 aa11.55□□□□□ -0.56
SSPN-202ENST00000422622 BAG6P46379 1132 aa11.55□□□□□ -0.56
SSPN-202ENST00000422622 NSUN4Q96CB9 384 aaKnown RBP11.55□□□□□ -0.56
SSPN-202ENST00000422622 CABP5Q9NP86 173 aa11.55□□□□□ -0.56
SSPN-202ENST00000422622 BBOX1O75936 387 aa11.54□□□□□ -0.56
SSPN-202ENST00000422622 RAD17O75943 681 aa11.54□□□□□ -0.56
SSPN-202ENST00000422622 DHX8Q14562 1220 aaKnown RBP11.54□□□□□ -0.56
SSPN-202ENST00000422622 ZNF274Q96GC6 653 aaPredicted RBP11.54□□□□□ -0.56
SSPN-202ENST00000422622 USP40Q9NVE5 1235 aa11.54□□□□□ -0.56
SSPN-202ENST00000422622 LRP6O75581 1613 aa11.54□□□□□ -0.56
SSPN-202ENST00000422622 ZSCAN16Q9H4T2 348 aaPredicted RBP11.54□□□□□ -0.56
SSPN-202ENST00000422622 RPAP1Q9BWH6 1393 aaPredicted RBP11.54□□□□□ -0.56
SSPN-202ENST00000422622 BTBD18B2RXH4 712 aa11.54□□□□□ -0.56
SSPN-202ENST00000422622 AXDND1Q5T1B0 1012 aaPredicted RBP11.54□□□□□ -0.56
SSPN-202ENST00000422622 LARGE2Q8N3Y3 721 aa11.54□□□□□ -0.56
SSPN-202ENST00000422622 PDGFDQ9GZP0 370 aaPredicted RBP11.54□□□□□ -0.56
SSPN-202ENST00000422622 POLLQ9UGP5 575 aa11.54□□□□□ -0.56
SSPN-202ENST00000422622 SH2B2O14492 632 aaPredicted RBP11.54□□□□□ -0.56
SSPN-202ENST00000422622 ADRA2BP18089 450 aa11.54□□□□□ -0.56
SSPN-202ENST00000422622 ALDH1B1P30837 517 aa11.54□□□□□ -0.56
SSPN-202ENST00000422622 EXOSC10Q01780 885 aaKnown RBP11.54□□□□□ -0.56
SSPN-202ENST00000422622 LRSAM1Q6UWE0 723 aa11.54□□□□□ -0.56
SSPN-202ENST00000422622 TBC1D16Q8TBP0 767 aa11.54□□□□□ -0.56
SSPN-202ENST00000422622 LTBP4Q8N2S1 1624 aa11.53□□□□□ -0.56
SSPN-202ENST00000422622 DIS3L2Q8IYB7 885 aaKnown RBP11.53□□□□□ -0.56
SSPN-202ENST00000422622 ANKRD20A12PQ8NF67 263 aa11.53□□□□□ -0.56
SSPN-202ENST00000422622 NKX2-3Q8TAU0 364 aa11.53□□□□□ -0.56
SSPN-202ENST00000422622 ZSCAN10Q96SZ4 725 aaPredicted RBP11.53□□□□□ -0.56
SSPN-202ENST00000422622 RUFY1Q96T51 708 aa11.53□□□□□ -0.56
SSPN-202ENST00000422622 DCP1AQ9NPI6 582 aaPredicted RBP11.53□□□□□ -0.56
SSPN-202ENST00000422622 CLEC10AQ8IUN9 316 aa11.53□□□□□ -0.56
SSPN-202ENST00000422622 SLF2Q8IX21 1173 aa11.53□□□□□ -0.56
SSPN-202ENST00000422622 PROM2Q8N271 834 aa11.53□□□□□ -0.56
SSPN-202ENST00000422622 FANCBQ8NB91 859 aa11.53□□□□□ -0.56
SSPN-202ENST00000422622 TTC12Q9H892 705 aaPredicted RBP11.53□□□□□ -0.56
SSPN-202ENST00000422622 GPCPD1Q9NPB8 672 aa11.53□□□□□ -0.56
SSPN-202ENST00000422622 CLRN2A0PK11 232 aa11.53□□□□□ -0.56
SSPN-202ENST00000422622 NR1I2O75469 434 aa11.53□□□□□ -0.56
SSPN-202ENST00000422622 ZYXQ15942 572 aaKnown RBP11.53□□□□□ -0.56
SSPN-202ENST00000422622 GPKOWQ92917 476 aaPredicted RBP eCLIP11.53□□□□□ -0.56
SSPN-202ENST00000422622 CLIC4Q9Y696 253 aa11.53□□□□□ -0.56
SSPN-202ENST00000422622 SPTLC2O15270 562 aa11.52□□□□□ -0.56
SSPN-202ENST00000422622 SLURP2P0DP57 97 aa11.52□□□□□ -0.56
SSPN-202ENST00000422622 NR5A1Q13285 461 aa11.52□□□□□ -0.56
SSPN-202ENST00000422622 AOC3Q16853 763 aa11.52□□□□□ -0.56
SSPN-202ENST00000422622 CTR9Q6PD62 1173 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms