RNA–Protein interactions for RNA: ENST00000421816.6

GCDH-202, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,109 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-202ENST00000421816 MAP2K2P36507 400 aa23.24■■□□□ 1.31
GCDH-202ENST00000421816 NOGQ13253 232 aa23.24■■□□□ 1.31
GCDH-202ENST00000421816 ZKSCAN4Q969J2 545 aaPredicted RBP23.24■■□□□ 1.31
GCDH-202ENST00000421816 HELLSQ9NRZ9 838 aa23.24■■□□□ 1.31
GCDH-202ENST00000421816 SNCAIPQ9Y6H5 919 aa23.24■■□□□ 1.31
GCDH-202ENST00000421816 HLA-DOAP06340 250 aa23.23■■□□□ 1.31
GCDH-202ENST00000421816 SDSP20132 328 aa23.23■■□□□ 1.31
GCDH-202ENST00000421816 NOL9Q5SY16 702 aaKnown RBP23.23■■□□□ 1.31
GCDH-202ENST00000421816 TTC6Q86TZ1 520 aa23.23■■□□□ 1.31
GCDH-202ENST00000421816 EHD4Q9H223 541 aa23.23■■□□□ 1.31
GCDH-202ENST00000421816 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.23■■□□□ 1.31
GCDH-202ENST00000421816 MCM9Q9NXL9 1143 aa23.23■■□□□ 1.31
GCDH-202ENST00000421816 CSADQ9Y600 493 aa23.23■■□□□ 1.31
GCDH-202ENST00000421816 DOCK1Q14185 1865 aa23.22■■□□□ 1.31
GCDH-202ENST00000421816 FAM196BA6NMK8 535 aa23.22■■□□□ 1.31
GCDH-202ENST00000421816 GSG1L2A8MUP6 293 aa23.22■■□□□ 1.31
GCDH-202ENST00000421816 GNAT2P19087 354 aa23.22■■□□□ 1.31
GCDH-202ENST00000421816 SPRYD7Q5W111 196 aa23.22■■□□□ 1.31
GCDH-202ENST00000421816 GIMAP6Q6P9H5 292 aa23.22■■□□□ 1.31
GCDH-202ENST00000421816 SKAP1Q86WV1 359 aa23.22■■□□□ 1.31
GCDH-202ENST00000421816 WNK4Q96J92 1243 aa23.22■■□□□ 1.31
GCDH-202ENST00000421816 FAM227BQ96M60 508 aa23.22■■□□□ 1.31
GCDH-202ENST00000421816 DNAJC18Q9H819 358 aa23.22■■□□□ 1.31
GCDH-202ENST00000421816 ELP3Q9H9T3 547 aa23.22■■□□□ 1.31
GCDH-202ENST00000421816 A0A0D9SFI3 127 aa23.21■■□□□ 1.31
GCDH-202ENST00000421816 PLCD1P51178 756 aa23.21■■□□□ 1.31
GCDH-202ENST00000421816 NMIQ13287 307 aaPredicted RBP23.21■■□□□ 1.31
GCDH-202ENST00000421816 SLC4A8Q2Y0W8 1093 aa23.21■■□□□ 1.31
GCDH-202ENST00000421816 ZIC5Q96T25 663 aa23.21■■□□□ 1.31
GCDH-202ENST00000421816 ATAD5Q96QE3 1844 aa23.2■■□□□ 1.3
GCDH-202ENST00000421816 CTNND1O60716 968 aaKnown RBP23.2■■□□□ 1.3
GCDH-202ENST00000421816 POLR3DP05423 398 aaPredicted RBP23.2■■□□□ 1.3
GCDH-202ENST00000421816 ZBTB48P10074 688 aaPredicted RBP23.2■■□□□ 1.3
GCDH-202ENST00000421816 GJA5P36382 358 aa23.2■■□□□ 1.3
GCDH-202ENST00000421816 MCMDC2Q4G0Z9 681 aa23.2■■□□□ 1.3
GCDH-202ENST00000421816 SERPINB13Q9UIV8 391 aa23.2■■□□□ 1.3
GCDH-202ENST00000421816 SPDYE5A6NIY4 337 aa23.19■■□□□ 1.3
GCDH-202ENST00000421816 PATL2C9JE40 543 aaKnown RBP23.19■■□□□ 1.3
GCDH-202ENST00000421816 HIP1O00291 1037 aa23.19■■□□□ 1.3
GCDH-202ENST00000421816 KIF23Q02241 960 aaPredicted RBP23.19■■□□□ 1.3
GCDH-202ENST00000421816 CCDC129Q6ZRS4 1044 aa23.19■■□□□ 1.3
GCDH-202ENST00000421816 SCYL3Q8IZE3 742 aa23.19■■□□□ 1.3
GCDH-202ENST00000421816 CRACR2BQ8N4Y2 399 aaPredicted RBP23.19■■□□□ 1.3
GCDH-202ENST00000421816 OPTNQ96CV9 577 aa23.19■■□□□ 1.3
GCDH-202ENST00000421816 DDRGK1Q96HY6 314 aa23.19■■□□□ 1.3
GCDH-202ENST00000421816 USP17L12C9JPN9 530 aa23.18■■□□□ 1.3
GCDH-202ENST00000421816 USP17L21D6R901 530 aa23.18■■□□□ 1.3
GCDH-202ENST00000421816 CYP2D6P10635 497 aa23.18■■□□□ 1.3
GCDH-202ENST00000421816 EVX2Q03828 476 aa23.18■■□□□ 1.3
GCDH-202ENST00000421816 GABPAQ06546 454 aa23.18■■□□□ 1.3
GCDH-202ENST00000421816 RRP1BQ14684 758 aaKnown RBP23.18■■□□□ 1.3
GCDH-202ENST00000421816 C12orf60Q5U649 245 aa23.18■■□□□ 1.3
GCDH-202ENST00000421816 CTR9Q6PD62 1173 aa23.18■■□□□ 1.3
GCDH-202ENST00000421816 ERO1BQ86YB8 467 aa23.18■■□□□ 1.3
GCDH-202ENST00000421816 CNKSR2Q8WXI2 1034 aa23.18■■□□□ 1.3
GCDH-202ENST00000421816 EPB41L4AQ9HCS5 686 aaPredicted RBP23.18■■□□□ 1.3
GCDH-202ENST00000421816 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.18■■□□□ 1.3
GCDH-202ENST00000421816 PHIPQ8WWQ0 1821 aa23.17■■□□□ 1.3
GCDH-202ENST00000421816 FOXP2O15409 715 aa23.17■■□□□ 1.3
GCDH-202ENST00000421816 SBK1Q52WX2 424 aa23.17■■□□□ 1.3
GCDH-202ENST00000421816 TATDN1Q6P1N9 297 aa23.17■■□□□ 1.3
GCDH-202ENST00000421816 TRIM34Q9BYJ4 488 aa23.17■■□□□ 1.3
GCDH-202ENST00000421816 DIAPH3Q9NSV4 1193 aa23.17■■□□□ 1.3
GCDH-202ENST00000421816 ARPP21Q9UBL0 812 aaPredicted RBP23.17■■□□□ 1.3
GCDH-202ENST00000421816 TAOK2Q9UL54 1235 aa23.17■■□□□ 1.3
GCDH-202ENST00000421816 CAP2P40123 477 aa23.16■■□□□ 1.3
GCDH-202ENST00000421816 PPATQ06203 517 aa23.16■■□□□ 1.3
GCDH-202ENST00000421816 MKRN3Q13064 507 aaKnown RBP23.16■■□□□ 1.3
GCDH-202ENST00000421816 REM2Q8IYK8 340 aaPredicted RBP23.16■■□□□ 1.3
GCDH-202ENST00000421816 IFNL3Q8IZI9 196 aa23.16■■□□□ 1.3
GCDH-202ENST00000421816 CYP2D7A0A087X1C5 515 aa23.15■■□□□ 1.3
GCDH-202ENST00000421816 PPIL2Q13356 520 aa23.15■■□□□ 1.3
GCDH-202ENST00000421816 ZNF589Q86UQ0 364 aaPredicted RBP23.15■■□□□ 1.3
GCDH-202ENST00000421816 AMOTL1Q8IY63 956 aa23.15■■□□□ 1.3
GCDH-202ENST00000421816 OTUD5Q96G74 571 aa23.15■■□□□ 1.3
GCDH-202ENST00000421816 CCDC171Q6TFL3 1326 aa23.14■■□□□ 1.3
GCDH-202ENST00000421816 APPP05067 770 aa23.14■■□□□ 1.29
GCDH-202ENST00000421816 PTPRAP18433 802 aa23.14■■□□□ 1.29
GCDH-202ENST00000421816 SHMT1P34896 483 aa23.14■■□□□ 1.29
GCDH-202ENST00000421816 MAP2K1Q02750 393 aaPredicted RBP23.14■■□□□ 1.29
GCDH-202ENST00000421816 CWC27Q6UX04 472 aaKnown RBP23.14■■□□□ 1.29
GCDH-202ENST00000421816 NACAP1Q9BZK3 213 aa23.14■■□□□ 1.29
GCDH-202ENST00000421816 PICK1Q9NRD5 415 aa23.14■■□□□ 1.29
GCDH-202ENST00000421816 WBP1LQ9NX94 342 aa23.14■■□□□ 1.29
GCDH-202ENST00000421816 MYH8P13535 1937 aa23.14■■□□□ 1.29
GCDH-202ENST00000421816 MANSC4A6NHS7 340 aaPredicted RBP23.13■■□□□ 1.29
GCDH-202ENST00000421816 SMIM22K7EJ46 135 aa23.13■■□□□ 1.29
GCDH-202ENST00000421816 TM4SF4P48230 202 aa23.13■■□□□ 1.29
GCDH-202ENST00000421816 TDO2P48775 406 aa23.13■■□□□ 1.29
GCDH-202ENST00000421816 BMP2KLQ5H9B9 411 aa23.13■■□□□ 1.29
GCDH-202ENST00000421816 VPS53Q5VIR6 699 aa23.13■■□□□ 1.29
GCDH-202ENST00000421816 GINM1Q9NU53 330 aa23.13■■□□□ 1.29
GCDH-202ENST00000421816 SWAP70Q9UH65 585 aa23.13■■□□□ 1.29
GCDH-202ENST00000421816 CHMLP26374 656 aa23.12■■□□□ 1.29
GCDH-202ENST00000421816 MFAP1P55081 439 aaKnown RBP23.12■■□□□ 1.29
GCDH-202ENST00000421816 JAG1P78504 1218 aa23.12■■□□□ 1.29
GCDH-202ENST00000421816 ALX1Q15699 326 aa23.12■■□□□ 1.29
GCDH-202ENST00000421816 DYNLL2Q96FJ2 89 aa23.12■■□□□ 1.29
GCDH-202ENST00000421816 MS4A4AQ96JQ5 239 aa23.12■■□□□ 1.29
GCDH-202ENST00000421816 ROBO3Q96MS0 1386 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms