RNA–Protein interactions for RNA: ENST00000418713.5

RPUSD3-202, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 955 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-202ENST00000418713 SLC4A4Q9Y6R1 1079 aa23.82■■□□□ 1.4
RPUSD3-202ENST00000418713 GIMAP6Q6P9H5 292 aa23.81■■□□□ 1.4
RPUSD3-202ENST00000418713 OPTNQ96CV9 577 aa23.81■■□□□ 1.4
RPUSD3-202ENST00000418713 CCDC136Q96JN2 1154 aa23.81■■□□□ 1.4
RPUSD3-202ENST00000418713 TBC1D2Q9BYX2 928 aa23.81■■□□□ 1.4
RPUSD3-202ENST00000418713 PUS7LQ9H0K6 701 aaKnown RBP23.81■■□□□ 1.4
RPUSD3-202ENST00000418713 EHD4Q9H223 541 aa23.81■■□□□ 1.4
RPUSD3-202ENST00000418713 MCM9Q9NXL9 1143 aa23.81■■□□□ 1.4
RPUSD3-202ENST00000418713 SPDYE5A6NIY4 337 aa23.8■■□□□ 1.4
RPUSD3-202ENST00000418713 HIP1O00291 1037 aa23.8■■□□□ 1.4
RPUSD3-202ENST00000418713 ALDH1A1P00352 501 aa23.8■■□□□ 1.4
RPUSD3-202ENST00000418713 TM4SF4P48230 202 aa23.8■■□□□ 1.4
RPUSD3-202ENST00000418713 GTF2A2P52657 109 aa23.8■■□□□ 1.4
RPUSD3-202ENST00000418713 METTL16Q86W50 562 aaKnown RBP23.8■■□□□ 1.4
RPUSD3-202ENST00000418713 SCYL3Q8IZE3 742 aa23.8■■□□□ 1.4
RPUSD3-202ENST00000418713 ZKSCAN4Q969J2 545 aaPredicted RBP23.8■■□□□ 1.4
RPUSD3-202ENST00000418713 RILPL2Q969X0 211 aa23.8■■□□□ 1.4
RPUSD3-202ENST00000418713 SAP30BPQ9UHR5 308 aaKnown RBP23.8■■□□□ 1.4
RPUSD3-202ENST00000418713 SERPINB13Q9UIV8 391 aa23.8■■□□□ 1.4
RPUSD3-202ENST00000418713 PHF20L1A8MW92 1017 aa23.79■■□□□ 1.4
RPUSD3-202ENST00000418713 HSPA1AP0DMV8 641 aaKnown RBP23.79■■□□□ 1.4
RPUSD3-202ENST00000418713 HSPA1BP0DMV9 641 aaKnown RBP23.79■■□□□ 1.4
RPUSD3-202ENST00000418713 STRBPQ96SI9 672 aaKnown RBP23.79■■□□□ 1.4
RPUSD3-202ENST00000418713 NACAP1Q9BZK3 213 aa23.79■■□□□ 1.4
RPUSD3-202ENST00000418713 DCP1AQ9NPI6 582 aaPredicted RBP23.79■■□□□ 1.4
RPUSD3-202ENST00000418713 HELLSQ9NRZ9 838 aa23.79■■□□□ 1.4
RPUSD3-202ENST00000418713 SAGE1Q9NXZ1 904 aa23.79■■□□□ 1.4
RPUSD3-202ENST00000418713 FOCADQ5VW36 1801 aa23.78■■□□□ 1.4
RPUSD3-202ENST00000418713 INPP5BP32019 993 aa23.78■■□□□ 1.4
RPUSD3-202ENST00000418713 CTCFP49711 727 aaPredicted RBP23.78■■□□□ 1.4
RPUSD3-202ENST00000418713 PPIL2Q13356 520 aa23.78■■□□□ 1.4
RPUSD3-202ENST00000418713 ZMYM1Q5SVZ6 1142 aa23.78■■□□□ 1.4
RPUSD3-202ENST00000418713 SNCAIPQ9Y6H5 919 aa23.78■■□□□ 1.4
RPUSD3-202ENST00000418713 MFAP1P55081 439 aaKnown RBP23.77■■□□□ 1.4
RPUSD3-202ENST00000418713 MKRN3Q13064 507 aaKnown RBP23.77■■□□□ 1.4
RPUSD3-202ENST00000418713 SDR42E1Q8WUS8 393 aa23.77■■□□□ 1.4
RPUSD3-202ENST00000418713 OSBP2Q969R2 916 aa23.77■■□□□ 1.4
RPUSD3-202ENST00000418713 OTUD5Q96G74 571 aa23.77■■□□□ 1.4
RPUSD3-202ENST00000418713 THSD7BQ9C0I4 1608 aa23.77■■□□□ 1.4
RPUSD3-202ENST00000418713 GPAA1O43292 621 aa23.76■■□□□ 1.39
RPUSD3-202ENST00000418713 CETPP11597 493 aa23.76■■□□□ 1.39
RPUSD3-202ENST00000418713 SNAPC2Q13487 334 aa23.76■■□□□ 1.39
RPUSD3-202ENST00000418713 ARPP21Q9UBL0 812 aaPredicted RBP23.76■■□□□ 1.39
RPUSD3-202ENST00000418713 SWAP70Q9UH65 585 aa23.76■■□□□ 1.39
RPUSD3-202ENST00000418713 MYH1P12882 1939 aa23.76■■□□□ 1.39
RPUSD3-202ENST00000418713 CDK5RAP2Q96SN8 1893 aa23.75■■□□□ 1.39
RPUSD3-202ENST00000418713 PATL2C9JE40 543 aaKnown RBP23.75■■□□□ 1.39
RPUSD3-202ENST00000418713 APPP05067 770 aa23.75■■□□□ 1.39
RPUSD3-202ENST00000418713 ASNSP08243 561 aa23.75■■□□□ 1.39
RPUSD3-202ENST00000418713 CAP2P40123 477 aa23.75■■□□□ 1.39
RPUSD3-202ENST00000418713 AS3MTQ9HBK9 375 aa23.75■■□□□ 1.39
RPUSD3-202ENST00000418713 CXCL11O14625 94 aa23.74■■□□□ 1.39
RPUSD3-202ENST00000418713 SLFNL1Q499Z3 407 aa23.74■■□□□ 1.39
RPUSD3-202ENST00000418713 MCMDC2Q4G0Z9 681 aa23.74■■□□□ 1.39
RPUSD3-202ENST00000418713 ZIC5Q96T25 663 aa23.74■■□□□ 1.39
RPUSD3-202ENST00000418713 CABP5Q9NP86 173 aa23.74■■□□□ 1.39
RPUSD3-202ENST00000418713 TESPA1A2RU30 521 aaPredicted RBP23.73■■□□□ 1.39
RPUSD3-202ENST00000418713 PRKAB2O43741 272 aa23.73■■□□□ 1.39
RPUSD3-202ENST00000418713 PTPRAP18433 802 aa23.73■■□□□ 1.39
RPUSD3-202ENST00000418713 ZNF287Q9HBT7 754 aa23.73■■□□□ 1.39
RPUSD3-202ENST00000418713 ZHX2Q9Y6X8 837 aa23.73■■□□□ 1.39
RPUSD3-202ENST00000418713 IRF6O14896 467 aa23.72■■□□□ 1.39
RPUSD3-202ENST00000418713 TTC22Q5TAA0 569 aa23.72■■□□□ 1.39
RPUSD3-202ENST00000418713 TATDN1Q6P1N9 297 aa23.72■■□□□ 1.39
RPUSD3-202ENST00000418713 DIAPH3Q9NSV4 1193 aa23.72■■□□□ 1.39
RPUSD3-202ENST00000418713 RNF186Q9NXI6 227 aa23.72■■□□□ 1.39
RPUSD3-202ENST00000418713 CCL15-CCL14A0A0B4J2E2 113 aa23.71■■□□□ 1.39
RPUSD3-202ENST00000418713 USP17L5A8MUK1 530 aa23.71■■□□□ 1.39
RPUSD3-202ENST00000418713 USP17L12C9JPN9 530 aa23.71■■□□□ 1.39
RPUSD3-202ENST00000418713 USP17L21D6R901 530 aa23.71■■□□□ 1.39
RPUSD3-202ENST00000418713 SLC3A2P08195 630 aaKnown RBP23.71■■□□□ 1.39
RPUSD3-202ENST00000418713 SDSP20132 328 aa23.71■■□□□ 1.39
RPUSD3-202ENST00000418713 PDE4AP27815 886 aa23.71■■□□□ 1.39
RPUSD3-202ENST00000418713 TDO2P48775 406 aa23.71■■□□□ 1.39
RPUSD3-202ENST00000418713 CCL15Q16663 113 aa23.71■■□□□ 1.39
RPUSD3-202ENST00000418713 CERKLQ49MI3 558 aaPredicted RBP23.71■■□□□ 1.39
RPUSD3-202ENST00000418713 SBK1Q52WX2 424 aa23.71■■□□□ 1.39
RPUSD3-202ENST00000418713 C12orf60Q5U649 245 aa23.71■■□□□ 1.39
RPUSD3-202ENST00000418713 FASTKD5Q7L8L6 764 aaKnown RBP23.71■■□□□ 1.39
RPUSD3-202ENST00000418713 IFNL1Q8IU54 200 aa23.71■■□□□ 1.39
RPUSD3-202ENST00000418713 ZCCHC17Q9NP64 241 aaKnown RBP23.71■■□□□ 1.39
RPUSD3-202ENST00000418713 KCNH4Q9UQ05 1017 aa23.71■■□□□ 1.39
RPUSD3-202ENST00000418713 OTOFQ9HC10 1997 aa23.71■■□□□ 1.39
RPUSD3-202ENST00000418713 GSG1L2A8MUP6 293 aa23.7■■□□□ 1.38
RPUSD3-202ENST00000418713 M0R2C6 588 aa23.7■■□□□ 1.38
RPUSD3-202ENST00000418713 TRPA1O75762 1119 aa23.7■■□□□ 1.38
RPUSD3-202ENST00000418713 CHGBP05060 677 aa23.7■■□□□ 1.38
RPUSD3-202ENST00000418713 GJA5P36382 358 aa23.7■■□□□ 1.38
RPUSD3-202ENST00000418713 PLCD1P51178 756 aa23.7■■□□□ 1.38
RPUSD3-202ENST00000418713 MS4A4AQ96JQ5 239 aa23.7■■□□□ 1.38
RPUSD3-202ENST00000418713 PPP4R2Q9NY27 417 aa23.7■■□□□ 1.38
RPUSD3-202ENST00000418713 FAM196BA6NMK8 535 aa23.69■■□□□ 1.38
RPUSD3-202ENST00000418713 SLC4A8Q2Y0W8 1093 aa23.69■■□□□ 1.38
RPUSD3-202ENST00000418713 CTR9Q6PD62 1173 aa23.69■■□□□ 1.38
RPUSD3-202ENST00000418713 IFNL3Q8IZI9 196 aa23.69■■□□□ 1.38
RPUSD3-202ENST00000418713 RUFY2Q8WXA3 655 aa23.69■■□□□ 1.38
RPUSD3-202ENST00000418713 CCDC17Q96LX7 622 aa23.69■■□□□ 1.38
RPUSD3-202ENST00000418713 NAPBQ9H115 298 aa23.69■■□□□ 1.38
RPUSD3-202ENST00000418713 FOXN1O15353 648 aa23.68■■□□□ 1.38
RPUSD3-202ENST00000418713 GABPAQ06546 454 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms