RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 NIP7Q9Y221 180 aaKnown RBP eCLIP15.06■□□□□ 0
TNFRSF8-203ENST00000417814 CCDC66A2RUB6 948 aa15.05■□□□□ 0
TNFRSF8-203ENST00000417814 ATP2B2Q01814 1243 aa15.05■□□□□ 0
TNFRSF8-203ENST00000417814 SPATA5Q8NB90 893 aa15.05■□□□□ 0
TNFRSF8-203ENST00000417814 GPKOWQ92917 476 aaPredicted RBP eCLIP15.05■□□□□ 0
TNFRSF8-203ENST00000417814 FOXP2O15409 715 aa15.05■□□□□ -0
TNFRSF8-203ENST00000417814 YEATS4O95619 227 aa15.05■□□□□ -0
TNFRSF8-203ENST00000417814 MAN1B1Q9UKM7 699 aa15.05■□□□□ -0
TNFRSF8-203ENST00000417814 PLEKHA8P1O95397 391 aa15.05■□□□□ -0
TNFRSF8-203ENST00000417814 CAVIN2O95810 425 aa15.05■□□□□ -0
TNFRSF8-203ENST00000417814 ABL1P00519 1130 aa15.05■□□□□ -0
TNFRSF8-203ENST00000417814 CASP7P55210 303 aa15.05■□□□□ -0
TNFRSF8-203ENST00000417814 CERS3Q8IU89 383 aa15.05■□□□□ -0
TNFRSF8-203ENST00000417814 VPS18Q9P253 973 aa15.05■□□□□ -0
TNFRSF8-203ENST00000417814 STX8Q9UNK0 236 aa15.05■□□□□ -0
TNFRSF8-203ENST00000417814 UBN2Q6ZU65 1347 aa15.05■□□□□ -0
TNFRSF8-203ENST00000417814 RIMBP3CA6NJZ7 1639 aa15.04■□□□□ -0
TNFRSF8-203ENST00000417814 RIMBP3BA6NNM3 1639 aa15.04■□□□□ -0
TNFRSF8-203ENST00000417814 RIMBP3Q9UFD9 1639 aa15.04■□□□□ -0
TNFRSF8-203ENST00000417814 OAS2P29728 719 aaKnown RBP15.04■□□□□ -0
TNFRSF8-203ENST00000417814 RNASE9P60153 205 aaKnown RBP15.04■□□□□ -0
TNFRSF8-203ENST00000417814 SF3A3Q12874 501 aaKnown RBP eCLIP15.04■□□□□ -0
TNFRSF8-203ENST00000417814 NCAPHQ15003 741 aa15.04■□□□□ -0
TNFRSF8-203ENST00000417814 NOSTRINQ8IVI9 506 aa15.04■□□□□ -0
TNFRSF8-203ENST00000417814 CAGE1Q8TC20 777 aa15.04■□□□□ -0
TNFRSF8-203ENST00000417814 POLR3EQ9NVU0 708 aa15.04■□□□□ -0
TNFRSF8-203ENST00000417814 KDM6AO15550 1401 aaPredicted RBP15.04■□□□□ -0
TNFRSF8-203ENST00000417814 SSBP05455 408 aaKnown RBP eCLIP15.04■□□□□ -0
TNFRSF8-203ENST00000417814 ADD2P35612 726 aa15.04■□□□□ -0
TNFRSF8-203ENST00000417814 TERF2Q15554 542 aa15.04■□□□□ -0
TNFRSF8-203ENST00000417814 AATFQ9NY61 560 aaKnown RBP eCLIP15.04■□□□□ -0
TNFRSF8-203ENST00000417814 PALLDQ8WX93 1383 aa15.04■□□□□ -0
TNFRSF8-203ENST00000417814 ZSCAN12O43309 604 aa15.04■□□□□ -0
TNFRSF8-203ENST00000417814 ZFYP08048 801 aaPredicted RBP15.04■□□□□ -0
TNFRSF8-203ENST00000417814 GOLGA8HP0CJ92 632 aa15.04■□□□□ -0
TNFRSF8-203ENST00000417814 VEGFAP15692 232 aaPredicted RBP15.04■□□□□ -0
TNFRSF8-203ENST00000417814 CASP14P31944 242 aa15.04■□□□□ -0
TNFRSF8-203ENST00000417814 NYAP1Q6ZVC0 841 aa15.04■□□□□ -0
TNFRSF8-203ENST00000417814 TRMT1LQ7Z2T5 733 aaKnown RBP15.04■□□□□ -0
TNFRSF8-203ENST00000417814 C10orf67Q8IYJ2 551 aa15.04■□□□□ -0
TNFRSF8-203ENST00000417814 C3P01024 1663 aa15.03■□□□□ -0
TNFRSF8-203ENST00000417814 SPATA31D1Q6ZQQ2 1576 aa15.03■□□□□ -0
TNFRSF8-203ENST00000417814 PNMA6AP0CW24 399 aaPredicted RBP15.03■□□□□ -0
TNFRSF8-203ENST00000417814 BMP6P22004 513 aa15.03■□□□□ -0
TNFRSF8-203ENST00000417814 RBL2Q08999 1139 aa15.03■□□□□ -0
TNFRSF8-203ENST00000417814 SH2B2O14492 632 aaPredicted RBP15.03■□□□□ -0
TNFRSF8-203ENST00000417814 PDE8BO95263 885 aa15.03■□□□□ -0
TNFRSF8-203ENST00000417814 SLC5A1P13866 664 aa15.03■□□□□ -0
TNFRSF8-203ENST00000417814 EARS2Q5JPH6 523 aaKnown RBP15.03■□□□□ -0
TNFRSF8-203ENST00000417814 IFIT1BQ5T764 474 aaKnown RBP15.03■□□□□ -0
TNFRSF8-203ENST00000417814 RBM43Q6ZSC3 357 aaKnown RBP15.03■□□□□ -0
TNFRSF8-203ENST00000417814 GPR101Q96P66 508 aaPredicted RBP15.03■□□□□ -0
TNFRSF8-203ENST00000417814 TRIM10Q9UDY6 481 aa15.03■□□□□ -0
TNFRSF8-203ENST00000417814 PP2D1A8MPX8 630 aa15.03■□□□□ -0
TNFRSF8-203ENST00000417814 TPM1P09493 284 aa15.03■□□□□ -0
TNFRSF8-203ENST00000417814 IGHMBP2P38935 993 aaKnown RBP15.03■□□□□ -0
TNFRSF8-203ENST00000417814 ZHX3Q9H4I2 956 aa15.03■□□□□ -0
TNFRSF8-203ENST00000417814 UTYO14607 1347 aa15.02■□□□□ -0
TNFRSF8-203ENST00000417814 MEGF6O75095 1541 aa15.02■□□□□ -0
TNFRSF8-203ENST00000417814 ATP6V1AP38606 617 aa15.02■□□□□ -0
TNFRSF8-203ENST00000417814 CTSWP56202 376 aa15.02■□□□□ -0
TNFRSF8-203ENST00000417814 SARM1Q6SZW1 724 aa15.02■□□□□ -0
TNFRSF8-203ENST00000417814 RGS22Q8NE09 1264 aa15.02■□□□□ -0
TNFRSF8-203ENST00000417814 NBPF3Q9H094 633 aa15.02■□□□□ -0
TNFRSF8-203ENST00000417814 NRXN3Q9Y4C0 1643 aa15.02■□□□□ -0
TNFRSF8-203ENST00000417814 TMEM94Q12767 1356 aa15.02■□□□□ -0
TNFRSF8-203ENST00000417814 REREQ9P2R6 1566 aa15.02□□□□□ -0.01
TNFRSF8-203ENST00000417814 TRIM75PA6NK02 468 aa15.02□□□□□ -0.01
TNFRSF8-203ENST00000417814 SRGAP2O75044 1071 aa15.02□□□□□ -0.01
TNFRSF8-203ENST00000417814 IRX5P78411 483 aaPredicted RBP15.02□□□□□ -0.01
TNFRSF8-203ENST00000417814 FILIP1LQ4L180 1135 aa15.02□□□□□ -0.01
TNFRSF8-203ENST00000417814 NLRP10Q86W26 655 aa15.02□□□□□ -0.01
TNFRSF8-203ENST00000417814 ZNF654Q8IZM8 581 aa15.02□□□□□ -0.01
TNFRSF8-203ENST00000417814 SYMPKQ92797 1274 aaKnown RBP15.02□□□□□ -0.01
TNFRSF8-203ENST00000417814 MRPL44Q9H9J2 332 aaKnown RBP15.02□□□□□ -0.01
TNFRSF8-203ENST00000417814 EPB41L4AQ9HCS5 686 aaPredicted RBP15.02□□□□□ -0.01
TNFRSF8-203ENST00000417814 HEG1Q9ULI3 1381 aa15.02□□□□□ -0.01
TNFRSF8-203ENST00000417814 USP17L12C9JPN9 530 aa15.01□□□□□ -0.01
TNFRSF8-203ENST00000417814 USP17L21D6R901 530 aa15.01□□□□□ -0.01
TNFRSF8-203ENST00000417814 SLFN14P0C7P3 912 aa15.01□□□□□ -0.01
TNFRSF8-203ENST00000417814 CYP2D6P10635 497 aa15.01□□□□□ -0.01
TNFRSF8-203ENST00000417814 USP5P45974 858 aa15.01□□□□□ -0.01
TNFRSF8-203ENST00000417814 AKNAD1Q5T1N1 836 aa15.01□□□□□ -0.01
TNFRSF8-203ENST00000417814 STRBPQ96SI9 672 aaKnown RBP15.01□□□□□ -0.01
TNFRSF8-203ENST00000417814 ARFGAP3Q9NP61 516 aa15.01□□□□□ -0.01
TNFRSF8-203ENST00000417814 WNT7AO00755 349 aa15.01□□□□□ -0.01
TNFRSF8-203ENST00000417814 KIF5CO60282 957 aa15.01□□□□□ -0.01
TNFRSF8-203ENST00000417814 EIF5P55010 431 aaKnown RBP15.01□□□□□ -0.01
TNFRSF8-203ENST00000417814 EIF6P56537 245 aaKnown RBP15.01□□□□□ -0.01
TNFRSF8-203ENST00000417814 ANKRD13CQ8N6S4 541 aa15.01□□□□□ -0.01
TNFRSF8-203ENST00000417814 TIGD1Q96MW7 591 aa15.01□□□□□ -0.01
TNFRSF8-203ENST00000417814 TNKSO95271 1327 aa15.01□□□□□ -0.01
TNFRSF8-203ENST00000417814 ZMYM6O95789 1325 aa15.01□□□□□ -0.01
TNFRSF8-203ENST00000417814 A0A1W2PQ27 194 aa15.01□□□□□ -0.01
TNFRSF8-203ENST00000417814 A0A1W2PQ64 194 aa15.01□□□□□ -0.01
TNFRSF8-203ENST00000417814 A0A1W2PQD8 194 aa15.01□□□□□ -0.01
TNFRSF8-203ENST00000417814 MACROD2A1Z1Q3 448 aa15.01□□□□□ -0.01
TNFRSF8-203ENST00000417814 TSPY2A6NKD2 308 aa15.01□□□□□ -0.01
TNFRSF8-203ENST00000417814 JAKMIP3Q5VZ66 844 aa15.01□□□□□ -0.01
TNFRSF8-203ENST00000417814 TTC19Q6DKK2 380 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms