RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 RLBP1P12271 317 aa8.18□□□□□ -1.1
NIFKP3-201ENST00000417799 CDC25BP30305 580 aa8.18□□□□□ -1.1
NIFKP3-201ENST00000417799 BAG6P46379 1132 aa8.18□□□□□ -1.1
NIFKP3-201ENST00000417799 ZC3H6P61129 1189 aaKnown RBP8.18□□□□□ -1.1
NIFKP3-201ENST00000417799 PPP2R3AQ06190 1150 aa8.18□□□□□ -1.1
NIFKP3-201ENST00000417799 MAP3K11Q16584 847 aa8.18□□□□□ -1.1
NIFKP3-201ENST00000417799 RELL1Q8IUW5 271 aa8.18□□□□□ -1.1
NIFKP3-201ENST00000417799 WHAMMQ8TF30 809 aa8.18□□□□□ -1.1
NIFKP3-201ENST00000417799 CCSER2Q9H7U1 834 aa8.18□□□□□ -1.1
NIFKP3-201ENST00000417799 COPRSQ9NQ92 184 aa8.18□□□□□ -1.1
NIFKP3-201ENST00000417799 DDX41Q9UJV9 622 aaKnown RBP8.18□□□□□ -1.1
NIFKP3-201ENST00000417799 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.18□□□□□ -1.1
NIFKP3-201ENST00000417799 PCDHGB7Q9Y5F8 929 aa8.18□□□□□ -1.1
NIFKP3-201ENST00000417799 EID1Q9Y6B2 187 aa8.18□□□□□ -1.1
NIFKP3-201ENST00000417799 NEXMIFQ5QGS0 1516 aa8.18□□□□□ -1.1
NIFKP3-201ENST00000417799 LTKP29376 864 aa8.17□□□□□ -1.1
NIFKP3-201ENST00000417799 PWP1Q13610 501 aa8.17□□□□□ -1.1
NIFKP3-201ENST00000417799 MSL1Q68DK7 614 aa8.17□□□□□ -1.1
NIFKP3-201ENST00000417799 WFDC8Q8IUA0 241 aa8.17□□□□□ -1.1
NIFKP3-201ENST00000417799 ZNF654Q8IZM8 581 aa8.17□□□□□ -1.1
NIFKP3-201ENST00000417799 ZSCAN1Q8NBB4 408 aa8.17□□□□□ -1.1
NIFKP3-201ENST00000417799 C8orf37Q96NL8 207 aa8.17□□□□□ -1.1
NIFKP3-201ENST00000417799 SRA1Q9HD15 236 aaKnown RBP8.17□□□□□ -1.1
NIFKP3-201ENST00000417799 PRDM6Q9NQX0 595 aa8.17□□□□□ -1.1
NIFKP3-201ENST00000417799 KBTBD4Q9NVX7 518 aa8.17□□□□□ -1.1
NIFKP3-201ENST00000417799 ARHGAP23Q9P227 1491 aa8.17□□□□□ -1.1
NIFKP3-201ENST00000417799 NRXN1Q9ULB1 1477 aa8.17□□□□□ -1.1
NIFKP3-201ENST00000417799 MYO5BQ9ULV0 1848 aa8.17□□□□□ -1.1
NIFKP3-201ENST00000417799 LINC01387J3KSC0 135 aa8.16□□□□□ -1.1
NIFKP3-201ENST00000417799 SOX1O00570 391 aaPredicted RBP8.16□□□□□ -1.1
NIFKP3-201ENST00000417799 PPLO60437 1756 aa8.16□□□□□ -1.1
NIFKP3-201ENST00000417799 SLIT1O75093 1534 aa8.16□□□□□ -1.1
NIFKP3-201ENST00000417799 RACK1P63244 317 aaKnown RBP8.16□□□□□ -1.1
NIFKP3-201ENST00000417799 FAM117BQ6P1L5 589 aa8.16□□□□□ -1.1
NIFKP3-201ENST00000417799 DDX54Q8TDD1 881 aaKnown RBP8.16□□□□□ -1.1
NIFKP3-201ENST00000417799 C14orf93Q9H972 538 aaKnown RBP8.16□□□□□ -1.1
NIFKP3-201ENST00000417799 ENAMQ9NRM1 1142 aa8.16□□□□□ -1.1
NIFKP3-201ENST00000417799 IFT172Q9UG01 1749 aa8.15□□□□□ -1.1
NIFKP3-201ENST00000417799 ZNF142P52746 1687 aaPredicted RBP8.15□□□□□ -1.1
NIFKP3-201ENST00000417799 PIK3C2GO75747 1445 aa8.15□□□□□ -1.1
NIFKP3-201ENST00000417799 F6X3S4 739 aa8.15□□□□□ -1.1
NIFKP3-201ENST00000417799 PAGE1O75459 146 aa8.15□□□□□ -1.1
NIFKP3-201ENST00000417799 GBP2P32456 591 aaPredicted RBP8.15□□□□□ -1.1
NIFKP3-201ENST00000417799 LIG3P49916 1009 aa8.15□□□□□ -1.1
NIFKP3-201ENST00000417799 ZNF385CQ66K41 422 aaPredicted RBP8.15□□□□□ -1.1
NIFKP3-201ENST00000417799 TTBK2Q6IQ55 1244 aa8.15□□□□□ -1.1
NIFKP3-201ENST00000417799 TXNDC11Q6PKC3 985 aa8.15□□□□□ -1.1
NIFKP3-201ENST00000417799 ANKLE2Q86XL3 938 aa8.15□□□□□ -1.1
NIFKP3-201ENST00000417799 SVOPQ8N4V2 548 aa8.15□□□□□ -1.1
NIFKP3-201ENST00000417799 NEDD1Q8NHV4 660 aa8.15□□□□□ -1.1
NIFKP3-201ENST00000417799 SLC7A3Q8WY07 619 aa8.15□□□□□ -1.1
NIFKP3-201ENST00000417799 TMEM74Q96NL1 305 aa8.15□□□□□ -1.1
NIFKP3-201ENST00000417799 ACBD3Q9H3P7 528 aa8.15□□□□□ -1.1
NIFKP3-201ENST00000417799 SAMM50Q9Y512 469 aa8.15□□□□□ -1.1
NIFKP3-201ENST00000417799 RALGAPBQ86X10 1494 aa8.14□□□□□ -1.11
NIFKP3-201ENST00000417799 ROCK2O75116 1388 aaKnown RBP8.14□□□□□ -1.11
NIFKP3-201ENST00000417799 MINDY4BA8MYZ0 360 aa8.14□□□□□ -1.11
NIFKP3-201ENST00000417799 ARL4DP49703 201 aa8.14□□□□□ -1.11
NIFKP3-201ENST00000417799 PIP4K2BP78356 416 aa8.14□□□□□ -1.11
NIFKP3-201ENST00000417799 SUZ12Q15022 739 aaKnown RBP8.14□□□□□ -1.11
NIFKP3-201ENST00000417799 NAALADL2Q58DX5 795 aa8.14□□□□□ -1.11
NIFKP3-201ENST00000417799 PCNX4Q63HM2 1172 aa8.14□□□□□ -1.11
NIFKP3-201ENST00000417799 WNT8BQ93098 351 aa8.14□□□□□ -1.11
NIFKP3-201ENST00000417799 CARD11Q9BXL7 1154 aa8.14□□□□□ -1.11
NIFKP3-201ENST00000417799 SOX17Q9H6I2 414 aaPredicted RBP8.14□□□□□ -1.11
NIFKP3-201ENST00000417799 RRAGCQ9HB90 399 aa8.14□□□□□ -1.11
NIFKP3-201ENST00000417799 SCAF11Q99590 1463 aaKnown RBP8.13□□□□□ -1.11
NIFKP3-201ENST00000417799 GPRASP1Q5JY77 1395 aa8.13□□□□□ -1.11
NIFKP3-201ENST00000417799 PLEKHG1Q9ULL1 1385 aa8.13□□□□□ -1.11
NIFKP3-201ENST00000417799 FSCN2O14926 492 aa8.13□□□□□ -1.11
NIFKP3-201ENST00000417799 NID1P14543 1247 aa8.13□□□□□ -1.11
NIFKP3-201ENST00000417799 NME2P22392 152 aa8.13□□□□□ -1.11
NIFKP3-201ENST00000417799 DGKGP49619 791 aa8.13□□□□□ -1.11
NIFKP3-201ENST00000417799 C19orf57Q0VDD7 668 aa8.13□□□□□ -1.11
NIFKP3-201ENST00000417799 COL9A3Q14050 684 aaPredicted RBP8.13□□□□□ -1.11
NIFKP3-201ENST00000417799 HGSNATQ68CP4 663 aa8.13□□□□□ -1.11
NIFKP3-201ENST00000417799 DMRTC2Q8IXT2 367 aaPredicted RBP8.13□□□□□ -1.11
NIFKP3-201ENST00000417799 PHC3Q8NDX5 983 aa8.13□□□□□ -1.11
NIFKP3-201ENST00000417799 OSGEPQ9NPF4 335 aa8.13□□□□□ -1.11
NIFKP3-201ENST00000417799 TLR6Q9Y2C9 796 aa8.13□□□□□ -1.11
NIFKP3-201ENST00000417799 BMP6P22004 513 aa8.12□□□□□ -1.11
NIFKP3-201ENST00000417799 HSPA2P54652 639 aa8.12□□□□□ -1.11
NIFKP3-201ENST00000417799 RPS26P62854 115 aaKnown RBP8.12□□□□□ -1.11
NIFKP3-201ENST00000417799 GSTM4Q03013 218 aa8.12□□□□□ -1.11
NIFKP3-201ENST00000417799 TMEM132EQ6IEE7 984 aa8.12□□□□□ -1.11
NIFKP3-201ENST00000417799 AGMOQ6ZNB7 445 aa8.12□□□□□ -1.11
NIFKP3-201ENST00000417799 SULF2Q8IWU5 870 aa8.12□□□□□ -1.11
NIFKP3-201ENST00000417799 CAPN10Q9HC96 672 aa8.12□□□□□ -1.11
NIFKP3-201ENST00000417799 TRPM1Q7Z4N2 1603 aa8.11□□□□□ -1.11
NIFKP3-201ENST00000417799 EIF4EBP3O60516 100 aaPredicted RBP8.11□□□□□ -1.11
NIFKP3-201ENST00000417799 HOXB4P17483 251 aaPredicted RBP8.11□□□□□ -1.11
NIFKP3-201ENST00000417799 LMNB1P20700 586 aa8.11□□□□□ -1.11
NIFKP3-201ENST00000417799 ARNTP27540 789 aa8.11□□□□□ -1.11
NIFKP3-201ENST00000417799 EIF4A3P38919 411 aaKnown RBP8.11□□□□□ -1.11
NIFKP3-201ENST00000417799 TNNI2P48788 182 aa8.11□□□□□ -1.11
NIFKP3-201ENST00000417799 AP3B2Q13367 1082 aa8.11□□□□□ -1.11
NIFKP3-201ENST00000417799 RHOVQ96L33 236 aa8.11□□□□□ -1.11
NIFKP3-201ENST00000417799 CARD10Q9BWT7 1032 aa8.11□□□□□ -1.11
NIFKP3-201ENST00000417799 EMILIN2Q9BXX0 1053 aa8.11□□□□□ -1.11
NIFKP3-201ENST00000417799 CBX8Q9HC52 389 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms