RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 ZNF333Q96JL9 665 aa30.92■■■□□ 2.54
VEGFA-208ENST00000417285 COG6Q9Y2V7 657 aa30.92■■■□□ 2.54
VEGFA-208ENST00000417285 TRIM75PA6NK02 468 aa30.91■■■□□ 2.54
VEGFA-208ENST00000417285 HMMRO75330 724 aa30.91■■■□□ 2.54
VEGFA-208ENST00000417285 CAP2P40123 477 aa30.91■■■□□ 2.54
VEGFA-208ENST00000417285 AACSQ86V21 672 aa30.91■■■□□ 2.54
VEGFA-208ENST00000417285 FOXP4Q8IVH2 680 aaPredicted RBP30.91■■■□□ 2.54
VEGFA-208ENST00000417285 FMNL1O95466 1100 aaPredicted RBP30.9■■■□□ 2.54
VEGFA-208ENST00000417285 CYP2C8P10632 490 aa30.9■■■□□ 2.54
VEGFA-208ENST00000417285 TGFBRAP1Q8WUH2 860 aa30.9■■■□□ 2.54
VEGFA-208ENST00000417285 ZBTB40Q9NUA8 1239 aa30.9■■■□□ 2.54
VEGFA-208ENST00000417285 POTEFA5A3E0 1075 aa30.89■■■□□ 2.54
VEGFA-208ENST00000417285 FAM196BA6NMK8 535 aa30.89■■■□□ 2.54
VEGFA-208ENST00000417285 BCRP11274 1271 aa30.89■■■□□ 2.54
VEGFA-208ENST00000417285 CYP7A1P22680 504 aa30.89■■■□□ 2.54
VEGFA-208ENST00000417285 ADGRA1Q86SQ6 560 aa30.89■■■□□ 2.54
VEGFA-208ENST00000417285 KIAA0100Q14667 2235 aaKnown RBP30.89■■■□□ 2.53
VEGFA-208ENST00000417285 CENPFP49454 3210 aa30.88■■■□□ 2.53
VEGFA-208ENST00000417285 IDH1O75874 414 aaKnown RBP30.88■■■□□ 2.53
VEGFA-208ENST00000417285 ZNF280CQ8ND82 737 aa30.88■■■□□ 2.53
VEGFA-208ENST00000417285 RHPN1Q8TCX5 695 aa30.88■■■□□ 2.53
VEGFA-208ENST00000417285 TRIM47Q96LD4 638 aa30.88■■■□□ 2.53
VEGFA-208ENST00000417285 SRRDQ9UH36 339 aa30.88■■■□□ 2.53
VEGFA-208ENST00000417285 USP17L5A8MUK1 530 aa30.87■■■□□ 2.53
VEGFA-208ENST00000417285 MAP3K12Q12852 859 aa30.87■■■□□ 2.53
VEGFA-208ENST00000417285 METTL16Q86W50 562 aaKnown RBP30.87■■■□□ 2.53
VEGFA-208ENST00000417285 MAPKAPK5Q8IW41 473 aa30.87■■■□□ 2.53
VEGFA-208ENST00000417285 PROCA1Q8NCQ7 364 aaPredicted RBP30.87■■■□□ 2.53
VEGFA-208ENST00000417285 AGTPBP1Q9UPW5 1226 aa30.87■■■□□ 2.53
VEGFA-208ENST00000417285 SPP2Q13103 211 aa30.86■■■□□ 2.53
VEGFA-208ENST00000417285 CLASRPQ8N2M8 674 aaKnown RBP30.86■■■□□ 2.53
VEGFA-208ENST00000417285 KIF1BPQ96EK5 621 aa30.86■■■□□ 2.53
VEGFA-208ENST00000417285 FLT1P17948 1338 aa30.86■■■□□ 2.53
VEGFA-208ENST00000417285 CTGFP29279 349 aa30.85■■■□□ 2.53
VEGFA-208ENST00000417285 FCGRTP55899 365 aa30.85■■■□□ 2.53
VEGFA-208ENST00000417285 PRPF38BQ5VTL8 546 aaKnown RBP30.85■■■□□ 2.53
VEGFA-208ENST00000417285 TRIM34Q9BYJ4 488 aa30.85■■■□□ 2.53
VEGFA-208ENST00000417285 AS3MTQ9HBK9 375 aa30.85■■■□□ 2.53
VEGFA-208ENST00000417285 GINM1Q9NU53 330 aa30.85■■■□□ 2.53
VEGFA-208ENST00000417285 RAB11FIP3O75154 756 aa30.84■■■□□ 2.53
VEGFA-208ENST00000417285 OSBPP22059 807 aa30.84■■■□□ 2.53
VEGFA-208ENST00000417285 TTF1Q15361 905 aaPredicted RBP30.84■■■□□ 2.53
VEGFA-208ENST00000417285 SLC4A8Q2Y0W8 1093 aa30.84■■■□□ 2.53
VEGFA-208ENST00000417285 CCDC84Q86UT8 332 aaPredicted RBP30.84■■■□□ 2.53
VEGFA-208ENST00000417285 CRACR2BQ8N4Y2 399 aaPredicted RBP30.84■■■□□ 2.53
VEGFA-208ENST00000417285 SMCR8Q8TEV9 937 aaPredicted RBP30.84■■■□□ 2.53
VEGFA-208ENST00000417285 IL1RAPL2Q9NP60 686 aa30.84■■■□□ 2.53
VEGFA-208ENST00000417285 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.84■■■□□ 2.53
VEGFA-208ENST00000417285 PNMA3Q9UL41 463 aa30.84■■■□□ 2.53
VEGFA-208ENST00000417285 HLA-DOAP06340 250 aa30.83■■■□□ 2.53
VEGFA-208ENST00000417285 ASNSP08243 561 aa30.83■■■□□ 2.53
VEGFA-208ENST00000417285 PABPC4Q13310 644 aaKnown RBP eCLIP30.83■■■□□ 2.536e-13■■■■■ 112.3
VEGFA-208ENST00000417285 RRP1BQ14684 758 aaKnown RBP30.83■■■□□ 2.53
VEGFA-208ENST00000417285 MAGEB6Q8N7X4 407 aa30.83■■■□□ 2.53
VEGFA-208ENST00000417285 RAET1EQ8TD07 263 aa30.83■■■□□ 2.53
VEGFA-208ENST00000417285 WDR18Q9BV38 432 aa30.83■■■□□ 2.53
VEGFA-208ENST00000417285 PALD1Q9ULE6 856 aa30.83■■■□□ 2.53
VEGFA-208ENST00000417285 MAST2Q6P0Q8 1798 aa30.82■■■□□ 2.52
VEGFA-208ENST00000417285 EN2P19622 333 aaPredicted RBP30.82■■■□□ 2.52
VEGFA-208ENST00000417285 DYNLL1P63167 89 aaKnown RBP30.82■■■□□ 2.52
VEGFA-208ENST00000417285 PDE3AQ14432 1141 aa30.82■■■□□ 2.52
VEGFA-208ENST00000417285 SIRT2Q8IXJ6 389 aa30.82■■■□□ 2.52
VEGFA-208ENST00000417285 SH3TC2Q8TF17 1288 aa30.82■■■□□ 2.52
VEGFA-208ENST00000417285 ECM2O94769 699 aaPredicted RBP30.81■■■□□ 2.52
VEGFA-208ENST00000417285 ANTXR1Q9H6X2 564 aa30.81■■■□□ 2.52
VEGFA-208ENST00000417285 DOCK1Q14185 1865 aa30.8■■■□□ 2.52
VEGFA-208ENST00000417285 MYPNQ86TC9 1320 aa30.8■■■□□ 2.52
VEGFA-208ENST00000417285 IFIT2P09913 472 aaKnown RBP30.8■■■□□ 2.52
VEGFA-208ENST00000417285 SH3D19Q5HYK7 790 aa30.8■■■□□ 2.52
VEGFA-208ENST00000417285 MIGA1Q8NAN2 632 aa30.8■■■□□ 2.52
VEGFA-208ENST00000417285 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.8■■■□□ 2.52
VEGFA-208ENST00000417285 NDUFB9Q9Y6M9 179 aa30.8■■■□□ 2.52
VEGFA-208ENST00000417285 USP5P45974 858 aa30.79■■■□□ 2.52
VEGFA-208ENST00000417285 TREML2Q5T2D2 321 aa30.79■■■□□ 2.52
VEGFA-208ENST00000417285 APBB1O00213 710 aa30.78■■■□□ 2.52
VEGFA-208ENST00000417285 GRK4P32298 578 aa30.78■■■□□ 2.52
VEGFA-208ENST00000417285 HMGCS2P54868 508 aa30.78■■■□□ 2.52
VEGFA-208ENST00000417285 SAP30BPQ9UHR5 308 aaKnown RBP30.78■■■□□ 2.52
VEGFA-208ENST00000417285 GCLCP48506 637 aaPredicted RBP30.77■■■□□ 2.52
VEGFA-208ENST00000417285 C19orf81C9J6K1 198 aa30.76■■■□□ 2.51
VEGFA-208ENST00000417285 BACE1P56817 501 aa30.76■■■□□ 2.51
VEGFA-208ENST00000417285 C20orf194Q5TEA3 1177 aa30.76■■■□□ 2.51
VEGFA-208ENST00000417285 TTC6Q86TZ1 520 aa30.76■■■□□ 2.51
VEGFA-208ENST00000417285 DNAJC18Q9H819 358 aa30.76■■■□□ 2.51
VEGFA-208ENST00000417285 PRKCZQ05513 592 aa30.75■■■□□ 2.51
VEGFA-208ENST00000417285 TMOD4Q9NZQ9 345 aa30.75■■■□□ 2.51
VEGFA-208ENST00000417285 MYCP01106 439 aaPredicted RBP30.74■■■□□ 2.51
VEGFA-208ENST00000417285 FAM110CQ1W6H9 321 aa30.74■■■□□ 2.51
VEGFA-208ENST00000417285 SLC9C2Q5TAH2 1124 aa30.74■■■□□ 2.51
VEGFA-208ENST00000417285 ANKRD13CQ8N6S4 541 aa30.74■■■□□ 2.51
VEGFA-208ENST00000417285 EHD4Q9H223 541 aa30.74■■■□□ 2.51
VEGFA-208ENST00000417285 PHIPQ8WWQ0 1821 aa30.74■■■□□ 2.51
VEGFA-208ENST00000417285 MAGEB6P1A0A0J9YX57 407 aa30.73■■■□□ 2.51
VEGFA-208ENST00000417285 USP17L10C9JJH3 530 aa30.73■■■□□ 2.51
VEGFA-208ENST00000417285 TNPO2O14787 897 aaKnown RBP30.73■■■□□ 2.51
VEGFA-208ENST00000417285 SLAIN1Q8ND83 568 aa30.73■■■□□ 2.51
VEGFA-208ENST00000417285 ASCC2Q9H1I8 757 aaPredicted RBP30.73■■■□□ 2.51
VEGFA-208ENST00000417285 BIN2Q9UBW5 565 aaPredicted RBP30.73■■■□□ 2.51
VEGFA-208ENST00000417285 SERPINB13Q9UIV8 391 aa30.73■■■□□ 2.51
VEGFA-208ENST00000417285 UBXN2AP68543 259 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms