RNA–Protein interactions for RNA: ENST00000417157.2

SLC13A3-205, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-205ENST00000417157 ZCCHC17Q9NP64 241 aaKnown RBP17.16■□□□□ 0.34
SLC13A3-205ENST00000417157 TCRBV5S4A2TA0A5A2 114 aa17.15■□□□□ 0.34
SLC13A3-205ENST00000417157 GLRX3O76003 335 aaKnown RBP17.15■□□□□ 0.34
SLC13A3-205ENST00000417157 TBC1D8O95759 1140 aa17.15■□□□□ 0.34
SLC13A3-205ENST00000417157 ANKRD45Q5TZF3 282 aa17.15■□□□□ 0.34
SLC13A3-205ENST00000417157 TTC6Q86TZ1 520 aa17.15■□□□□ 0.34
SLC13A3-205ENST00000417157 EXOC6Q8TAG9 804 aa17.15■□□□□ 0.34
SLC13A3-205ENST00000417157 BRI3BPQ8WY22 251 aa17.15■□□□□ 0.34
SLC13A3-205ENST00000417157 KCNH4Q9UQ05 1017 aa17.15■□□□□ 0.34
SLC13A3-205ENST00000417157 MYO5AQ9Y4I1 1855 aaKnown RBP17.14■□□□□ 0.33
SLC13A3-205ENST00000417157 CXCL11O14625 94 aa17.14■□□□□ 0.33
SLC13A3-205ENST00000417157 PTPRAP18433 802 aa17.14■□□□□ 0.33
SLC13A3-205ENST00000417157 KBTBD3Q8NAB2 608 aa17.14■□□□□ 0.33
SLC13A3-205ENST00000417157 DDRGK1Q96HY6 314 aa17.14■□□□□ 0.33
SLC13A3-205ENST00000417157 PALD1Q9ULE6 856 aa17.14■□□□□ 0.33
SLC13A3-205ENST00000417157 FOCADQ5VW36 1801 aa17.14■□□□□ 0.33
SLC13A3-205ENST00000417157 GPR25O00155 361 aa17.13■□□□□ 0.33
SLC13A3-205ENST00000417157 ZFYP08048 801 aaPredicted RBP17.13■□□□□ 0.33
SLC13A3-205ENST00000417157 IFFO2Q5TF58 517 aa17.13■□□□□ 0.33
SLC13A3-205ENST00000417157 PTPN18Q99952 460 aa17.13■□□□□ 0.33
SLC13A3-205ENST00000417157 EHD4Q9H223 541 aa17.13■□□□□ 0.33
SLC13A3-205ENST00000417157 ZFYVE28Q9HCC9 887 aa17.13■□□□□ 0.33
SLC13A3-205ENST00000417157 GINM1Q9NU53 330 aa17.13■□□□□ 0.33
SLC13A3-205ENST00000417157 SAP30BPQ9UHR5 308 aaKnown RBP17.13■□□□□ 0.33
SLC13A3-205ENST00000417157 ZHX2Q9Y6X8 837 aa17.13■□□□□ 0.33
SLC13A3-205ENST00000417157 DOCK1Q14185 1865 aa17.12■□□□□ 0.33
SLC13A3-205ENST00000417157 FAM196BA6NMK8 535 aa17.12■□□□□ 0.33
SLC13A3-205ENST00000417157 FKTNO75072 461 aa17.12■□□□□ 0.33
SLC13A3-205ENST00000417157 CAP2P40123 477 aa17.12■□□□□ 0.33
SLC13A3-205ENST00000417157 TAF1CQ15572 869 aaPredicted RBP17.12■□□□□ 0.33
SLC13A3-205ENST00000417157 TSHZ3Q63HK5 1081 aa17.12■□□□□ 0.33
SLC13A3-205ENST00000417157 FASTKD5Q7L8L6 764 aaKnown RBP17.12■□□□□ 0.33
SLC13A3-205ENST00000417157 ANKRD23Q86SG2 305 aa17.12■□□□□ 0.33
SLC13A3-205ENST00000417157 METTL16Q86W50 562 aaKnown RBP17.12■□□□□ 0.33
SLC13A3-205ENST00000417157 AMOTL1Q8IY63 956 aa17.12■□□□□ 0.33
SLC13A3-205ENST00000417157 LCORLQ8N3X6 602 aa17.12■□□□□ 0.33
SLC13A3-205ENST00000417157 ZNF296Q8WUU4 475 aaPredicted RBP17.12■□□□□ 0.33
SLC13A3-205ENST00000417157 AS3MTQ9HBK9 375 aa17.12■□□□□ 0.33
SLC13A3-205ENST00000417157 SERPINB13Q9UIV8 391 aa17.12■□□□□ 0.33
SLC13A3-205ENST00000417157 TAOK2Q9UL54 1235 aa17.12■□□□□ 0.33
SLC13A3-205ENST00000417157 MBD4O95243 580 aa17.11■□□□□ 0.33
SLC13A3-205ENST00000417157 POLR3DP05423 398 aaPredicted RBP17.11■□□□□ 0.33
SLC13A3-205ENST00000417157 ASNSP08243 561 aa17.11■□□□□ 0.33
SLC13A3-205ENST00000417157 CRHR2Q13324 411 aa17.11■□□□□ 0.33
SLC13A3-205ENST00000417157 SMC5Q8IY18 1101 aa17.11■□□□□ 0.33
SLC13A3-205ENST00000417157 PI4K2BQ8TCG2 481 aa17.11■□□□□ 0.33
SLC13A3-205ENST00000417157 ARMT1Q9H993 441 aa17.11■□□□□ 0.33
SLC13A3-205ENST00000417157 ATP8A2Q9NTI2 1148 aa17.11■□□□□ 0.33
SLC13A3-205ENST00000417157 DGKZQ13574 1117 aa17.1■□□□□ 0.33
SLC13A3-205ENST00000417157 CTU1Q7Z7A3 348 aaKnown RBP17.1■□□□□ 0.33
SLC13A3-205ENST00000417157 FAM43AQ8N2R8 423 aa17.1■□□□□ 0.33
SLC13A3-205ENST00000417157 MCM9Q9NXL9 1143 aa17.1■□□□□ 0.33
SLC13A3-205ENST00000417157 AFG3L2Q9Y4W6 797 aa17.1■□□□□ 0.33
SLC13A3-205ENST00000417157 CDK5RAP2Q96SN8 1893 aa17.1■□□□□ 0.33
SLC13A3-205ENST00000417157 A0A0G2JLL6 359 aaPredicted RBP17.09■□□□□ 0.33
SLC13A3-205ENST00000417157 USP17L5A8MUK1 530 aa17.09■□□□□ 0.33
SLC13A3-205ENST00000417157 BTBD19C9JJ37 291 aa17.09■□□□□ 0.33
SLC13A3-205ENST00000417157 RNF113AO15541 343 aaKnown RBP17.09■□□□□ 0.33
SLC13A3-205ENST00000417157 SLURP2P0DP57 97 aa17.09■□□□□ 0.33
SLC13A3-205ENST00000417157 PKN2Q16513 984 aaKnown RBP17.09■□□□□ 0.33
SLC13A3-205ENST00000417157 PRRT2Q7Z6L0 340 aaPredicted RBP17.09■□□□□ 0.33
SLC13A3-205ENST00000417157 OTUD7AQ8TE49 926 aaPredicted RBP17.09■□□□□ 0.33
SLC13A3-205ENST00000417157 APPBP2Q92624 585 aa17.09■□□□□ 0.33
SLC13A3-205ENST00000417157 ERO1AQ96HE7 468 aa17.09■□□□□ 0.33
SLC13A3-205ENST00000417157 PARK7Q99497 189 aaKnown RBP17.09■□□□□ 0.33
SLC13A3-205ENST00000417157 FSD1Q9BTV5 496 aa17.09■□□□□ 0.33
SLC13A3-205ENST00000417157 DNAJC18Q9H819 358 aa17.09■□□□□ 0.33
SLC13A3-205ENST00000417157 DCP1AQ9NPI6 582 aaPredicted RBP17.09■□□□□ 0.33
SLC13A3-205ENST00000417157 SALL3Q9BXA9 1300 aa17.09■□□□□ 0.33
SLC13A3-205ENST00000417157 DDX60LQ5H9U9 1706 aaKnown RBP17.08■□□□□ 0.32
SLC13A3-205ENST00000417157 TRIM75PA6NK02 468 aa17.08■□□□□ 0.32
SLC13A3-205ENST00000417157 ARHGEF6Q15052 776 aa17.08■□□□□ 0.32
SLC13A3-205ENST00000417157 SLC4A8Q2Y0W8 1093 aa17.08■□□□□ 0.32
SLC13A3-205ENST00000417157 ZNF280CQ8ND82 737 aa17.08■□□□□ 0.32
SLC13A3-205ENST00000417157 SDR42E1Q8WUS8 393 aa17.08■□□□□ 0.32
SLC13A3-205ENST00000417157 MCOLN1Q9GZU1 580 aa17.08■□□□□ 0.32
SLC13A3-205ENST00000417157 STAP2Q9UGK3 403 aa17.08■□□□□ 0.32
SLC13A3-205ENST00000417157 NAV1Q8NEY1 1877 aa17.07■□□□□ 0.32
SLC13A3-205ENST00000417157 PDHXO00330 501 aa17.07■□□□□ 0.32
SLC13A3-205ENST00000417157 TLR2O60603 784 aa17.07■□□□□ 0.32
SLC13A3-205ENST00000417157 GNAT2P19087 354 aa17.07■□□□□ 0.32
SLC13A3-205ENST00000417157 TATDN1Q6P1N9 297 aa17.07■□□□□ 0.32
SLC13A3-205ENST00000417157 PUS7LQ9H0K6 701 aaKnown RBP17.07■□□□□ 0.32
SLC13A3-205ENST00000417157 ZBTB21Q9ULJ3 1066 aa17.07■□□□□ 0.32
SLC13A3-205ENST00000417157 SLC45A1Q9Y2W3 748 aa17.07■□□□□ 0.32
SLC13A3-205ENST00000417157 SLC4A4Q9Y6R1 1079 aa17.07■□□□□ 0.32
SLC13A3-205ENST00000417157 SIPA1L1O43166 1804 aa17.07■□□□□ 0.32
SLC13A3-205ENST00000417157 MYH7P12883 1935 aa17.06■□□□□ 0.32
SLC13A3-205ENST00000417157 GDF11O95390 407 aa17.06■□□□□ 0.32
SLC13A3-205ENST00000417157 PDE1AP54750 535 aa17.06■□□□□ 0.32
SLC13A3-205ENST00000417157 SP3Q02447 781 aa17.06■□□□□ 0.32
SLC13A3-205ENST00000417157 B4GALNT3Q6L9W6 998 aa17.06■□□□□ 0.32
SLC13A3-205ENST00000417157 GADL1Q6ZQY3 521 aa17.06■□□□□ 0.32
SLC13A3-205ENST00000417157 CHD1LQ86WJ1 897 aa17.06■□□□□ 0.32
SLC13A3-205ENST00000417157 TICAM2Q86XR7 235 aa17.06■□□□□ 0.32
SLC13A3-205ENST00000417157 PROCA1Q8NCQ7 364 aaPredicted RBP17.06■□□□□ 0.32
SLC13A3-205ENST00000417157 EVI5LQ96CN4 794 aa17.06■□□□□ 0.32
SLC13A3-205ENST00000417157 ABHD8Q96I13 439 aa17.06■□□□□ 0.32
SLC13A3-205ENST00000417157 LNPKQ9C0E8 428 aa17.06■□□□□ 0.32
SLC13A3-205ENST00000417157 R3HDMLQ9H3Y0 253 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms