RNA–Protein interactions for RNA: ENST00000417066.5

CCDC148-204, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best)

Gene CCDC148, Length 1,447 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-204ENST00000417066 IRF6O14896 467 aa23.07■■□□□ 1.28
CCDC148-204ENST00000417066 CA12O43570 354 aa23.07■■□□□ 1.28
CCDC148-204ENST00000417066 RRP1BQ14684 758 aaKnown RBP23.07■■□□□ 1.28
CCDC148-204ENST00000417066 NOL9Q5SY16 702 aaKnown RBP23.07■■□□□ 1.28
CCDC148-204ENST00000417066 CRNKL1Q9BZJ0 848 aaKnown RBP23.07■■□□□ 1.28
CCDC148-204ENST00000417066 DNAJC18Q9H819 358 aa23.07■■□□□ 1.28
CCDC148-204ENST00000417066 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.07■■□□□ 1.28
CCDC148-204ENST00000417066 FOCADQ5VW36 1801 aa23.07■■□□□ 1.28
CCDC148-204ENST00000417066 SCYL3Q8IZE3 742 aa23.06■■□□□ 1.28
CCDC148-204ENST00000417066 IGF2BP3O00425 579 aaKnown RBP eCLIP23.05■■□□□ 1.28
CCDC148-204ENST00000417066 RNF113AO15541 343 aaKnown RBP23.05■■□□□ 1.28
CCDC148-204ENST00000417066 EVX2Q03828 476 aa23.05■■□□□ 1.28
CCDC148-204ENST00000417066 CCDC84Q86UT8 332 aaPredicted RBP23.05■■□□□ 1.28
CCDC148-204ENST00000417066 IFNL1Q8IU54 200 aa23.05■■□□□ 1.28
CCDC148-204ENST00000417066 OSBP2Q969R2 916 aa23.05■■□□□ 1.28
CCDC148-204ENST00000417066 PTPN18Q99952 460 aa23.05■■□□□ 1.28
CCDC148-204ENST00000417066 MYH7P12883 1935 aa23.04■■□□□ 1.28
CCDC148-204ENST00000417066 SIPA1L1O43166 1804 aa23.04■■□□□ 1.28
CCDC148-204ENST00000417066 CTNND1O60716 968 aaKnown RBP23.04■■□□□ 1.28
CCDC148-204ENST00000417066 TBC1D8O95759 1140 aa23.04■■□□□ 1.28
CCDC148-204ENST00000417066 PPATQ06203 517 aa23.04■■□□□ 1.28
CCDC148-204ENST00000417066 FOXP4Q8IVH2 680 aaPredicted RBP23.04■■□□□ 1.28
CCDC148-204ENST00000417066 PLEKHM2Q8IWE5 1019 aa23.04■■□□□ 1.28
CCDC148-204ENST00000417066 BRI3BPQ8WY22 251 aa23.04■■□□□ 1.28
CCDC148-204ENST00000417066 FSD1Q9BTV5 496 aa23.04■■□□□ 1.28
CCDC148-204ENST00000417066 DCP1AQ9NPI6 582 aaPredicted RBP23.04■■□□□ 1.28
CCDC148-204ENST00000417066 SAGE1Q9NXZ1 904 aa23.04■■□□□ 1.28
CCDC148-204ENST00000417066 HERC5Q9UII4 1024 aaKnown RBP23.04■■□□□ 1.28
CCDC148-204ENST00000417066 HLA-DOAP06340 250 aa23.03■■□□□ 1.28
CCDC148-204ENST00000417066 PTPRAP18433 802 aa23.03■■□□□ 1.28
CCDC148-204ENST00000417066 PLCD1P51178 756 aa23.03■■□□□ 1.28
CCDC148-204ENST00000417066 GTF2A2P52657 109 aa23.03■■□□□ 1.28
CCDC148-204ENST00000417066 INHBEP58166 350 aa23.03■■□□□ 1.28
CCDC148-204ENST00000417066 PPIL2Q13356 520 aa23.03■■□□□ 1.28
CCDC148-204ENST00000417066 METTL16Q86W50 562 aaKnown RBP23.03■■□□□ 1.28
CCDC148-204ENST00000417066 CRACR2BQ8N4Y2 399 aaPredicted RBP23.03■■□□□ 1.28
CCDC148-204ENST00000417066 MCM9Q9NXL9 1143 aa23.03■■□□□ 1.28
CCDC148-204ENST00000417066 CCL15-CCL14A0A0B4J2E2 113 aa23.02■■□□□ 1.28
CCDC148-204ENST00000417066 TESPA1A2RU30 521 aaPredicted RBP23.02■■□□□ 1.28
CCDC148-204ENST00000417066 CCL15Q16663 113 aa23.02■■□□□ 1.28
CCDC148-204ENST00000417066 APPBP2Q92624 585 aa23.02■■□□□ 1.28
CCDC148-204ENST00000417066 R3HDMLQ9H3Y0 253 aa23.02■■□□□ 1.28
CCDC148-204ENST00000417066 PICK1Q9NRD5 415 aa23.02■■□□□ 1.28
CCDC148-204ENST00000417066 ZHX2Q9Y6X8 837 aa23.02■■□□□ 1.28
CCDC148-204ENST00000417066 MYH1P12882 1939 aa23.02■■□□□ 1.28
CCDC148-204ENST00000417066 POLR3DP05423 398 aaPredicted RBP23.01■■□□□ 1.27
CCDC148-204ENST00000417066 ZFYP08048 801 aaPredicted RBP23.01■■□□□ 1.27
CCDC148-204ENST00000417066 CYP2D6P10635 497 aa23.01■■□□□ 1.27
CCDC148-204ENST00000417066 CAP2P40123 477 aa23.01■■□□□ 1.27
CCDC148-204ENST00000417066 JAG1P78504 1218 aa23.01■■□□□ 1.27
CCDC148-204ENST00000417066 SHROOM1Q2M3G4 852 aaPredicted RBP23.01■■□□□ 1.27
CCDC148-204ENST00000417066 STRBPQ96SI9 672 aaKnown RBP23.01■■□□□ 1.27
CCDC148-204ENST00000417066 SEC62Q99442 399 aaKnown RBP23.01■■□□□ 1.27
CCDC148-204ENST00000417066 PRDM10Q9NQV6 1147 aa23.01■■□□□ 1.27
CCDC148-204ENST00000417066 SLC4A4Q9Y6R1 1079 aa23.01■■□□□ 1.27
CCDC148-204ENST00000417066 M0R2C6 588 aa23■■□□□ 1.27
CCDC148-204ENST00000417066 TTC6Q86TZ1 520 aa23■■□□□ 1.27
CCDC148-204ENST00000417066 EVI5LQ96CN4 794 aa23■■□□□ 1.27
CCDC148-204ENST00000417066 TRIM34Q9BYJ4 488 aa23■■□□□ 1.27
CCDC148-204ENST00000417066 PDE4AP27815 886 aa22.99■■□□□ 1.27
CCDC148-204ENST00000417066 SNAPC2Q13487 334 aa22.99■■□□□ 1.27
CCDC148-204ENST00000417066 SERPINB13Q9UIV8 391 aa22.99■■□□□ 1.27
CCDC148-204ENST00000417066 KCNH4Q9UQ05 1017 aa22.99■■□□□ 1.27
CCDC148-204ENST00000417066 SMIM22K7EJ46 135 aa22.99■■□□□ 1.27
CCDC148-204ENST00000417066 GDF11O95390 407 aa22.99■■□□□ 1.27
CCDC148-204ENST00000417066 CETPP11597 493 aa22.99■■□□□ 1.27
CCDC148-204ENST00000417066 FAM43AQ8N2R8 423 aa22.99■■□□□ 1.27
CCDC148-204ENST00000417066 ATP8A2Q9NTI2 1148 aa22.99■■□□□ 1.27
CCDC148-204ENST00000417066 AFG3L2Q9Y4W6 797 aa22.99■■□□□ 1.27
CCDC148-204ENST00000417066 CYP2D7A0A087X1C5 515 aa22.98■■□□□ 1.27
CCDC148-204ENST00000417066 GPAA1O43292 621 aa22.98■■□□□ 1.27
CCDC148-204ENST00000417066 LRRFIP1Q32MZ4 808 aaKnown RBP22.98■■□□□ 1.27
CCDC148-204ENST00000417066 EHD4Q9H223 541 aa22.98■■□□□ 1.27
CCDC148-204ENST00000417066 OSBPL3Q9H4L5 887 aa22.98■■□□□ 1.27
CCDC148-204ENST00000417066 CASP8AP2Q9UKL3 1982 aa22.97■■□□□ 1.27
CCDC148-204ENST00000417066 LAMB1P07942 1786 aa22.97■■□□□ 1.27
CCDC148-204ENST00000417066 TRIM6-TRIM34B2RNG4 842 aa22.97■■□□□ 1.27
CCDC148-204ENST00000417066 BTBD19C9JJ37 291 aa22.97■■□□□ 1.27
CCDC148-204ENST00000417066 ZMYM1Q5SVZ6 1142 aa22.97■■□□□ 1.27
CCDC148-204ENST00000417066 RILPL2Q969X0 211 aa22.97■■□□□ 1.27
CCDC148-204ENST00000417066 DOCK1Q14185 1865 aa22.96■■□□□ 1.27
CCDC148-204ENST00000417066 NAV1Q8NEY1 1877 aa22.96■■□□□ 1.27
CCDC148-204ENST00000417066 DDX60LQ5H9U9 1706 aaKnown RBP22.96■■□□□ 1.27
CCDC148-204ENST00000417066 TRIM75PA6NK02 468 aa22.96■■□□□ 1.27
CCDC148-204ENST00000417066 GSG1L2A8MUP6 293 aa22.96■■□□□ 1.27
CCDC148-204ENST00000417066 USP17L12C9JPN9 530 aa22.96■■□□□ 1.27
CCDC148-204ENST00000417066 USP17L21D6R901 530 aa22.96■■□□□ 1.27
CCDC148-204ENST00000417066 ALDH1A1P00352 501 aa22.96■■□□□ 1.27
CCDC148-204ENST00000417066 OTUD7BQ6GQQ9 843 aa22.96■■□□□ 1.27
CCDC148-204ENST00000417066 CXCL11O14625 94 aa22.95■■□□□ 1.26
CCDC148-204ENST00000417066 GABPAQ06546 454 aa22.95■■□□□ 1.26
CCDC148-204ENST00000417066 MOGSQ13724 837 aa22.95■■□□□ 1.26
CCDC148-204ENST00000417066 TATDN1Q6P1N9 297 aa22.95■■□□□ 1.26
CCDC148-204ENST00000417066 SLC44A5Q8NCS7 719 aa22.95■■□□□ 1.26
CCDC148-204ENST00000417066 DYNLL2Q96FJ2 89 aa22.95■■□□□ 1.26
CCDC148-204ENST00000417066 BAZ2AQ9UIF9 1905 aaKnown RBP22.95■■□□□ 1.26
CCDC148-204ENST00000417066 SHMT1P34896 483 aa22.94■■□□□ 1.26
CCDC148-204ENST00000417066 CRHR2Q13324 411 aa22.94■■□□□ 1.26
CCDC148-204ENST00000417066 CTR9Q6PD62 1173 aa22.94■■□□□ 1.26
CCDC148-204ENST00000417066 CCDC129Q6ZRS4 1044 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms